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FFCP PHASE1:Mm9::chr5:36925030..36925048,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=100855|HGNC=|UniProt=E9Q8K4,Q8CGA2,F6Q3H8,Q5U224,D3Z400|association_with_transcript=0bp_to_ENSMUST00000031094,ENSMUST00000101273,ENSMUST00000141043,ENSMUST00000156658,NM_133910,uc008xeu.2,uc008xew.2_5end|description=CAGE_peak_2_at_Tbc1d14_5end|id=chr5:36925030..36925048,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.34e-10!63;UBERON:0000153!1.90e-10!94;UBERON:0003056!3.04e-10!49;UBERON:0002791!8.19e-10!29;UBERON:0003528!8.19e-10!29;UBERON:0001893!8.19e-10!29;UBERON:0000956!2.99e-09!21;UBERON:0001869!2.99e-09!21;UBERON:0000203!2.99e-09!21;UBERON:0002346!3.78e-09!71;UBERON:0003075!3.78e-09!71;UBERON:0007284!3.78e-09!71;UBERON:0002020!4.09e-09!34;UBERON:0007811!4.18e-09!86;UBERON:0002780!2.28e-08!39;UBERON:0001890!2.28e-08!39;UBERON:0006240!2.28e-08!39;UBERON:0002619!2.62e-08!17;UBERON:0003080!6.67e-08!40;UBERON:0004121!1.20e-07!102;UBERON:0000924!1.20e-07!102;UBERON:0006601!1.20e-07!102;UBERON:0000955!1.57e-07!50;UBERON:0006238!1.57e-07!50;UBERON:0001049!2.00e-07!52;UBERON:0005068!2.00e-07!52;UBERON:0006241!2.00e-07!52;UBERON:0007135!2.00e-07!52;UBERON:0002616!4.09e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.07e-10,73;UBERON:0003056,3.04e-10,49;UBERON:0003528,8.19e-10,29;UBERON:0002791,8.19e-10,29;UBERON:0001893,8.19e-10,29;UBERON:0000956,2.98e-09,21;UBERON:0001869,2.98e-09,21;UBERON:0000203,2.98e-09,21;UBERON:0002020,4.09e-09,34;UBERON:0002346,5.23e-09,64;UBERON:0003075,5.23e-09,64;UBERON:0007284,5.23e-09,64;UBERON:0002780,2.28e-08,39;UBERON:0001890,2.28e-08,39;UBERON:0006240,2.28e-08,39;UBERON:0002619,2.62e-08,17;UBERON:0000955,4.87e-08,47;UBERON:0006238,4.87e-08,47;UBERON:0003080,6.67e-08,40;UBERON:0002616,1.32e-07,46;UBERON:0001049,2.00e-07,52;UBERON:0005068,2.00e-07,52;UBERON:0006241,2.00e-07,52;UBERON:0007135,2.00e-07,52;UBERON:0004121,2.53e-07,95;UBERON:0000924,2.53e-07,95;UBERON:0006601,2.53e-07,95;UBERON:0010314,3.48e-07,92;UBERON:0000073,5.86e-07,54|phase1_expression=5.76535849577258,3.48975407639361,2.72999543633722,2.11724947914781,2.50447864973174,3.3575854382378,2.33612640595526,5.81054955487093,4.22366166455,3.04283884218592,1.88339765048055,3.11111420081812,4.62241970814255,3.93391810885488,3.66420737997229,3.23960427823721,2.09868563438444,4.88966356305268,4.79900517620086,4.66828616977833,3.91199134694921,4.56738375524072,3.39559725880616,2.55987876469451,1.14704640533585,2.8711598205751,0.430761996159075,1.939241094173,3.99049180858385,4.28451220591882,2.43903561720835,3.17515336729816,6.1506478758457,0,5.77703239502549,3.32469290716985,3.47087905646027,5.85944283031671,2.3440060335714,3.66466620781659,4.1176204162171,1.36609096991689,3.88408282424923,2.39203954153597,3.04130793658544,1.65192076945513,2.34717403304412,1.96222640742402,3.95435128922049,4.86074747685709,2.37976916763116,5.75010257459886,4.53013036355888,3.62681071005672,4.7053131879945,1.80081605225163,2.0057340795713,2.06268836910977,6.67644320836673,5.28990979272033,6.97214543856797,2.71075625655306,2.66788438833342,2.6996991518442,0.988866362566974,1.4209602298922,1.19840044207362,0.768436610643109,5.39185984004084,5.8052553482627,5.04779907243317,4.57041575046086,4.8591079009355,5.51208596467293,6.22995561618536,8.27296907949019,1.10115880999389,5.49055553766307,4.6081959976873,7.64940468835124,6.86157327018072,6.25096044668112,2.23346399201105,3.37657566019008,4.88954392885792,3.53554302568401,4.27115042397309,5.40558392893372,0.681535739998656,1.28471652181535,4.92769630792852,3.44169550792555,2.719885334831,0.539703191637817,2.59910566979068,1.34408066129201,3.7919993435573,1.70430322578058,0.519572009205738,0.35333957451034,6.4787973097273,0,0,0,1.94841936910093,3.04031838570118,2.02209778005913,3.65388415100992,9.06282592765101,6.53145411885229,3.12273588179045,2.74018930480927,3.92046345335299,5.42601505989441,8.58397562090645,5.27799683584637,4.20231445148436,2.4581890676385,2.65383165584962,4.36770494858005,5.07935492458905,6.30337829075789,3.72783522436244,7.90508151931177,7.33063473847093,6.89734049063197,4.91242010474273,1.79970819298022,5.71816021828791,3.2953940669061,6.40500843946077,9.5497307605777,10.2556348913443,11.5071955798649,3.74018480207208,4.70499662896497,7.12875546952214,5.84712761867437,5.81262344397452,7.15502310014011,5.85541993332167,4.82794419310293,5.40186389416048,5.12396380641431,7.34794190834341,6.40568601424249,8.24575176125614,4.9153640440413,5.17363183038821,4.34943984385984,5.98233822157426,5.04150184583422,4.17070873838397,8.358051996532,4.52720700097476,5.17489093728082,1.40442637462647,3.86021860672073,2.84163499395593,7.45652781127807,3.28336483973535,3.42117916775928,4.49814997611899,2.95146347621106,3.39387648352232,3.48800917125612,4.82892122519315,6.07179780309281,2.79751744852917,4.26835406605648,5.59374785866405,3.07019973593198,3.73235195994786,5.2340503316545,10.3042074796422,10.1875566255492,3.30418782983798,2.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|EntrezGene=100855
|HGNC=
|UniProt=E9Q8K4,Q8CGA2,F6Q3H8,Q5U224,D3Z400
|association_with_transcript=0bp_to_ENSMUST00000031094,ENSMUST00000101273,ENSMUST00000141043,ENSMUST00000156658,NM_133910,uc008xeu.2,uc008xew.2_5end
|description=CAGE_peak_2_at_Tbc1d14_5end
|id=chr5:36925030..36925048,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.34e-10!63;UBERON:0000153!1.90e-10!94;UBERON:0003056!3.04e-10!49;UBERON:0002791!8.19e-10!29;UBERON:0003528!8.19e-10!29;UBERON:0001893!8.19e-10!29;UBERON:0000956!2.99e-09!21;UBERON:0001869!2.99e-09!21;UBERON:0000203!2.99e-09!21;UBERON:0002346!3.78e-09!71;UBERON:0003075!3.78e-09!71;UBERON:0007284!3.78e-09!71;UBERON:0002020!4.09e-09!34;UBERON:0007811!4.18e-09!86;UBERON:0002780!2.28e-08!39;UBERON:0001890!2.28e-08!39;UBERON:0006240!2.28e-08!39;UBERON:0002619!2.62e-08!17;UBERON:0003080!6.67e-08!40;UBERON:0004121!1.20e-07!102;UBERON:0000924!1.20e-07!102;UBERON:0006601!1.20e-07!102;UBERON:0000955!1.57e-07!50;UBERON:0006238!1.57e-07!50;UBERON:0001049!2.00e-07!52;UBERON:0005068!2.00e-07!52;UBERON:0006241!2.00e-07!52;UBERON:0007135!2.00e-07!52;UBERON:0002616!4.09e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.07e-10,73;UBERON:0003056,3.04e-10,49;UBERON:0003528,8.19e-10,29;UBERON:0002791,8.19e-10,29;UBERON:0001893,8.19e-10,29;UBERON:0000956,2.98e-09,21;UBERON:0001869,2.98e-09,21;UBERON:0000203,2.98e-09,21;UBERON:0002020,4.09e-09,34;UBERON:0002346,5.23e-09,64;UBERON:0003075,5.23e-09,64;UBERON:0007284,5.23e-09,64;UBERON:0002780,2.28e-08,39;UBERON:0001890,2.28e-08,39;UBERON:0006240,2.28e-08,39;UBERON:0002619,2.62e-08,17;UBERON:0000955,4.87e-08,47;UBERON:0006238,4.87e-08,47;UBERON:0003080,6.67e-08,40;UBERON:0002616,1.32e-07,46;UBERON:0001049,2.00e-07,52;UBERON:0005068,2.00e-07,52;UBERON:0006241,2.00e-07,52;UBERON:0007135,2.00e-07,52;UBERON:0004121,2.53e-07,95;UBERON:0000924,2.53e-07,95;UBERON:0006601,2.53e-07,95;UBERON:0010314,3.48e-07,92;UBERON:0000073,5.86e-07,54
|phase1_expression=5.76535849577258,3.48975407639361,2.72999543633722,2.11724947914781,2.50447864973174,3.3575854382378,2.33612640595526,5.81054955487093,4.22366166455,3.04283884218592,1.88339765048055,3.11111420081812,4.62241970814255,3.93391810885488,3.66420737997229,3.23960427823721,2.09868563438444,4.88966356305268,4.79900517620086,4.66828616977833,3.91199134694921,4.56738375524072,3.39559725880616,2.55987876469451,1.14704640533585,2.8711598205751,0.430761996159075,1.939241094173,3.99049180858385,4.28451220591882,2.43903561720835,3.17515336729816,6.1506478758457,0,5.77703239502549,3.32469290716985,3.47087905646027,5.85944283031671,2.3440060335714,3.66466620781659,4.1176204162171,1.36609096991689,3.88408282424923,2.39203954153597,3.04130793658544,1.65192076945513,2.34717403304412,1.96222640742402,3.95435128922049,4.86074747685709,2.37976916763116,5.75010257459886,4.53013036355888,3.62681071005672,4.7053131879945,1.80081605225163,2.0057340795713,2.06268836910977,6.67644320836673,5.28990979272033,6.97214543856797,2.71075625655306,2.66788438833342,2.6996991518442,0.988866362566974,1.4209602298922,1.19840044207362,0.768436610643109,5.39185984004084,5.8052553482627,5.04779907243317,4.57041575046086,4.8591079009355,5.51208596467293,6.22995561618536,8.27296907949019,1.10115880999389,5.49055553766307,4.6081959976873,7.64940468835124,6.86157327018072,6.25096044668112,2.23346399201105,3.37657566019008,4.88954392885792,3.53554302568401,4.27115042397309,5.40558392893372,0.681535739998656,1.28471652181535,4.92769630792852,3.44169550792555,2.719885334831,0.539703191637817,2.59910566979068,1.34408066129201,3.7919993435573,1.70430322578058,0.519572009205738,0.35333957451034,6.4787973097273,0,0,0,1.94841936910093,3.04031838570118,2.02209778005913,3.65388415100992,9.06282592765101,6.53145411885229,3.12273588179045,2.74018930480927,3.92046345335299,5.42601505989441,8.58397562090645,5.27799683584637,4.20231445148436,2.4581890676385,2.65383165584962,4.36770494858005,5.07935492458905,6.30337829075789,3.72783522436244,7.90508151931177,7.33063473847093,6.89734049063197,4.91242010474273,1.79970819298022,5.71816021828791,3.2953940669061,6.40500843946077,9.5497307605777,10.2556348913443,11.5071955798649,3.74018480207208,4.70499662896497,7.12875546952214,5.84712761867437,5.81262344397452,7.15502310014011,5.85541993332167,4.82794419310293,5.40186389416048,5.12396380641431,7.34794190834341,6.40568601424249,8.24575176125614,4.9153640440413,5.17363183038821,4.34943984385984,5.98233822157426,5.04150184583422,4.17070873838397,8.358051996532,4.52720700097476,5.17489093728082,1.40442637462647,3.86021860672073,2.84163499395593,7.45652781127807,3.28336483973535,3.42117916775928,4.49814997611899,2.95146347621106,3.39387648352232,3.48800917125612,4.82892122519315,6.07179780309281,2.79751744852917,4.26835406605648,5.59374785866405,3.07019973593198,3.73235195994786,5.2340503316545,10.3042074796422,10.1875566255492,3.30418782983798,2.64450566663544,4.05247676016945,2.78684006232526,5.67016829817211,3.63030344322017,1.33426826306922,2.66315876557583,3.79623249235609,5.43506550589236,4.02136334080431,4.97391180102877,3.11942539390592,3.59527763461689,5.40345124686736,6.17337947088538,5.50036912763937,5.02693455482807,0,3.05476991767971,3.29719228184964,7.01358198903186,7.33543830641385,4.42830443938806,5.49495547444812,4.31890073726302,2.07516838961004,3.67059232575407,2.75182593158484,3.37293168577281,3.04290182082754,4.3411888755435,3.05551022137704,2.30156909960649,4.53978634970099,3.56929837144506,5.75072826109418,5.95425516269605,6.24075346229121,2.77836765741823,2.87035861635059,5.30687873499704,4.43407656399851,4.54779388249163,5.54080919902888,4.41337223015489,4.22442446919304,6.19773152534718,7.37935286746643,8.78101415360095,5.51723004371669,6.86540537911202,5.89982644032702,4.42430949732493,5.00786447411097,7.23245292907558,4.52373851817817,3.80733978673097,3.93411418415229,5.24279817978992,3.85321415970701,6.21221938938677,2.45902418065013,3.53459298086122,2.83957397474631,3.90438744296638,4.52389135238878,2.38968797952552,3.34198011123591,4.81230102341015,1.61924280669958,3.50707029493574,2.76701444562566,7.39039027770156,4.25820255624806,5.1639025063504,8.63300884573953,5.1140738121486,3.98235415019888,3.15614827001476,1.81394134178851,1.88605079755898,1.77181135728464,3.07435147943927,3.35956781118687,3.99887102425256,3.56497378384721,3.47640433729398,4.21674434299995,4.12542172992747,4.42571487479924,3.42116078659489,4.2688365648309,3.64372959553707,5.85222771019503,4.99432689285798,3.62007845324666,6.69822888052118,1.87737366450968,3.60114520468494,4.19003956304428,5.60613260001032,7.10443477461984,6.1519183426719,5.13301079213487,4.76008609260678,3.78925087618806,4.82105785227325,5.98048082792484,1.65109494370578,4.25947412950337,4.33247451110789,4.92099219795691,4.57556346413045,6.28920190977265,4.75834937900437,4.97519905695926,1.90934123603023,4.9032079005076,4.26970880966382,4.10420295122845,2.50905955217362,2.62035076495413,3.77620169877498,4.46328660916814,5.23511883968059,3.88844919875379,4.34937519160848,5.07323644815771,3.73791365109947,3.64008679005615,4.083474955225,5.42471258606471,5.57555214119568,8.09764946655702,8.20287624516886,7.44501345422547,6.76435538312817,7.4887801627045,3.79213344753814,1.21635129174099,4.00572732942826,4.02754551231165,5.19177417435696,7.3512101269068,7.09153152167816,5.61220203263393,8.07731599585181,7.01102621225999,6.75535440416831,5.06780979846713,6.5424052315424,7.24636793525727,5.66825959038028,0.887943813496259,1.25599399253266,0.335769232728157,3.28422309854724,3.75364950902364,5.12824547948342,3.00115730710692,3.51100472824754,9.60078132449013,7.36520378411483,6.87474616127276,9.10821866421544,11.6464028361009,7.55393897389701,10.1253375034771,7.20513925158753,8.60970577069989,5.1776031175182,4.04770655578289,2.79317411380722,3.07320490357441,3.8897074730927,5.44994222832754,5.51530525350042,6.00066165064361,3.29656091582231,4.49286893428541,5.05394423527595,3.29523089857312,5.65879024158229,4.40115085108447,3.71345883948242,6.20303064720623,4.28664322154766,7.18482820858104,2.50781986602817,5.35711671044299,3.82717192349433,2.05721551431249,2.66213709239006,3.09967046931517,3.48831399917588,3.85848459702856,4.90764725771724,4.024415403201,3.94604567156764,4.6173398707593,3.92799590160417,5.21994079746366,5.51625101303155,3.6830793885272,4.33823155320705,4.62975866354739,3.74715866906919,6.08222181958062,5.37177635120746,7.07766828654721,3.52946270591225,4.40548887678801
|short_description=p2@Tbc1d14
}}

Revision as of 07:35, 14 September 2013

Short description:p2@Tbc1d14
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Tbc1d14_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000031094, ENSMUST00000101273, ENSMUST00000141043, ENSMUST00000156658, NM_133910, uc008xeu.2, uc008xew.2_5end
EntrezGene:Tbc1d14
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Tbc1d14

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.11
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.62
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.93
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.80
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B93.99
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.78
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.04
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.53
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C36.68
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.39
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.51
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.23
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.65
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.86
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.41
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.65
accessory axillary lymph node, adult.CNhs10475.1063-29H99.06
adrenal gland, adult.CNhs10508.49-24D76.53
adrenal gland, embryo E14.CNhs11038.406-44C53.12
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F55.43
adrenal gland, neonate N00.CNhs11191.1311-23C18.58
adrenal gland, neonate N25.CNhs11223.1377-27I35.28
amnion, adult pregnant day17.5.CNhs10488.583-22A84.20
aorta, adult.CNhs10498.46-23H12.46
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A65.08
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B27.91
cerebellum, neonate N30.CNhs11135.1395-42I27.33
colon, adult.CNhs10468.36-18H76.90
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.91
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.72
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F19.55
cortex, adult.CNhs10473.12-14D510.26
cortex, neonate N30.CNhs11107.1392-42F211.51
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.13
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.85
epididymis, adult.CNhs10490.58-23B25.81
eyeball, adult.CNhs10484.31-12G47.16
eyeball, embryo E12.CNhs11016.345-16C65.86
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C95.40
eyeball, embryo E17.CNhs11023.1261-18D45.12
eyeball, neonate N00.CNhs11207.633-15C67.35
eyeball, neonate N01.CNhs11140.1532-43E76.41
eyeball, neonate N02.CNhs11205.1551-44G88.25
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E25.17
forelimb, embryo E12.CNhs10600.359-14H24.35
forelimb, embryo E13.CNhs10589.384-1E25.98
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C48.36
forelimb, embryo E18.CNhs11008.1520-43B54.53
gonad, embryo E13.CNhs11044.1564-45I65.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E97.46
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I93.42
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C63.39
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E36.07
heart, neonate N03.CNhs11221.1349-25I22.80
heart, neonate N10.CNhs11118.749-24G14.27
heart, neonate N16.CNhs11209.782-15G15.59
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D25.23
hippocampus, adult.CNhs10478.13-16E810.30
hippocampus, neonate N00.CNhs11228.627-43G110.19
intestinal mucosa, adult.CNhs10506.860-29I33.30
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I54.05
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D85.67
intestine, embryo E16.CNhs10585.463-22H43.63
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E95.44
intestine, neonate N06.CNhs11102.688-20B84.02
intestine, neonate N07.CNhs11095.720-20F24.97
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E35.40
intestine, neonate N30.CNhs11131.1384-42G16.17
kidney, embryo E14.CNhs10606.411-4I95.50
kidney, embryo E15.CNhs10997.434-16F85.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G77.01
kidney, neonate N10.CNhs11206.758-6D57.34
kidney, neonate N20.CNhs11113.832-19I14.43
kidney, neonate N25.CNhs11122.1353-25F35.49
kidney, neonate N30.CNhs11203.1385-42H14.32
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F83.67
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E13.37
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F44.54
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H25.95
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B14.43
lung, embryo E12.CNhs10522.354-16G24.55
lung, embryo E14.CNhs10604.404-26F85.54
lung, embryo E15.CNhs11020.432-17C54.41
lung, embryo E16.CNhs10998.458-17B64.22
lung, embryo E17.CNhs10605.480-44A66.20
lung, embryo E18.CNhs10583.1287-20I67.38
lung, neonate N00.CNhs11224.640-42C68.78
lung, neonate N06.CNhs11212.683-20E55.52
lung, neonate N07.CNhs11111.715-19A36.87
lung, neonate N10.CNhs11219.750-23E65.90
lung, neonate N20.CNhs11109.822-18A44.42
lung, neonate N25.CNhs11119.1359-25C75.01
lung, neonate N30.CNhs11133.1394-42H27.23
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H25.24
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A36.21
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I97.39
ovary, adult.CNhs10507.91-2I74.26
ovary, embryo E18.CNhs11040.505-44H75.16
ovary, neonate N00.CNhs11217.1299-22I48.63
oviduct, adult pregnant day01.CNhs10500.988-6G65.11
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C74.27
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B95.85
pituitary gland, embryo E16.CNhs11036.449-43F64.99
pituitary gland, embryo E17.CNhs11039.1265-44F53.62
pituitary gland, neonate N00.CNhs11190.1308-22E96.70
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G33.60
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C35.61
skin, neonate N00.CNhs11124.650-25G47.10
skin, neonate N03.CNhs11215.662-22H36.15
skin, neonate N06.CNhs11097.693-20I55.13
skin, neonate N10.CNhs11108.762-6C44.76
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G25.98
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F24.26
spleen, neonate N10.CNhs11116.752-24D14.33
spleen, neonate N20.CNhs11112.824-19H14.92
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.98
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E34.90
stomach, embryo E15.CNhs10603.1252-16G84.27
stomach, embryo E16.CNhs11022.459-17D44.10
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B83.78
stomach, neonate N07.CNhs11210.718-18A94.46
stomach, neonate N25.CNhs11104.1355-25E45.24
stomach, neonate N30.CNhs11134.1386-42I13.89
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F53.74
testis, embryo E15.CNhs11034.443-27C53.64
testis, embryo E16.CNhs11033.470-26G54.08
testis, embryo E17.CNhs11029.486-18I55.42
testis, embryo E18.CNhs11027.503-18G55.58
testis, neonate N00.CNhs11189.1300-22B78.10
testis, neonate N07.CNhs11222.726-26I48.20
testis, neonate N10.CNhs11204.763-44D97.45
testis, neonate N20.CNhs11110.839-18H36.76
testis, neonate N30.CNhs11130.1391-42E27.49
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I24.01
thymus, embryo E16.CNhs11002.456-26C54.03
thymus, embryo E17.CNhs10581.478-18C15.19
thymus, embryo E18.CNhs10595.1273-19G47.35
thymus, neonate N02.CNhs11181.1541-43F87.09
thymus, neonate N03.CNhs11137.2104-43C75.61
thymus, neonate N06.CNhs11197.681-26C48.08
thymus, neonate N07.CNhs11211.713-19D37.01
thymus, neonate N10.CNhs11194.748-24E46.76
thymus, neonate N20.CNhs11186.820-7A25.07
thymus, neonate N25.CNhs11125.1362-25G76.54
thymus, neonate N30.CNhs11132.1393-42G27.25
tongue, adult.CNhs10499.32-1B45.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E43.28
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E55.13
vagina, adult.CNhs10502.89-27D53.00
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.11
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I84.05
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B15.45
whole body, embryo E16.CNhs10514.453-14F25.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.18
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.34
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B36.08
whole body, neonate N00.CNhs10525.657-19C25.37
whole body, neonate N01.CNhs10576.659-23C67.08
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ecto-epithelium1.07e-1073
pre-chordal neural plate3.04e-1049
brain grey matter8.19e-1029
regional part of telencephalon8.19e-1029
telencephalon8.19e-1029
cerebral cortex2.98e-0921
cerebral hemisphere2.98e-0921
pallium2.98e-0921
gray matter4.09e-0934
neurectoderm5.23e-0964
neural plate5.23e-0964
presumptive neural plate5.23e-0964
regional part of forebrain2.28e-0839
forebrain2.28e-0839
future forebrain2.28e-0839
regional part of cerebral cortex2.62e-0817
brain4.87e-0847
future brain4.87e-0847
anterior neural tube6.67e-0840
regional part of brain1.32e-0746
neural tube2.00e-0752
neural rod2.00e-0752
future spinal cord2.00e-0752
neural keel2.00e-0752
ectoderm-derived structure2.53e-0795
ectoderm2.53e-0795
presumptive ectoderm2.53e-0795
structure with developmental contribution from neural crest3.48e-0792
regional part of nervous system5.86e-0754







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