FFCP PHASE1:Mm9::chr1:74241227..74241232,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=227288|HGNC=|MCL_coexpression_id=6|UniProt=Q810W6|association_with_transcript=-22bp_to_ENSMUST00000053389,NM_178241,uc007blm.1_5end|description=CAGE_peak_1_at_Cxcr1_5end|id=chr1:74241227..74241232,-|ontology_enrichment_celltype=CL:0000791!1.07e-12!9;CL:0000789!1.07e-12!9;CL:0002420!1.07e-12!9;CL:0002419!1.07e-12!9;CL:0000790!1.07e-12!9;CL:0000838!7.09e-12!12;CL:0000542!7.42e-11!13;CL:0000051!7.42e-11!13;CL:0000624!8.82e-11!8;CL:0000893!3.00e-10!6;CL:0002489!3.00e-10!6;CL:0000898!3.00e-10!6;CL:0000809!3.00e-10!6;CL:0000810!3.00e-10!6;CL:0000895!3.00e-10!6;CL:0000808!3.00e-10!6;CL:0000894!3.00e-10!6;CL:0000806!3.00e-10!6;CL:0000807!3.00e-10!6;CL:0000805!3.00e-10!6;CL:0002425!3.00e-10!6;CL:0002436!3.00e-10!6;CL:0002427!3.00e-10!6;CL:0002428!3.00e-10!6;CL:0002429!3.00e-10!6;CL:0002433!3.00e-10!6;CL:0002431!3.00e-10!6;CL:0002432!3.00e-10!6;CL:0000084!3.40e-10!11;CL:0000827!3.40e-10!11;CL:0000738!5.56e-08!17;CL:0002087!5.56e-08!17;CL:0002031!8.26e-08!25;CL:0000988!7.11e-07!32;CL:0002032!7.11e-07!32;CL:0000037!7.11e-07!32;CL:0000566!7.11e-07!32;CL:0000837!7.11e-07!32|ontology_enrichment_celltype_v019_2=CL:0000355,1.46e-09,9|ontology_enrichment_disease=DOID:0060100!5.06e-09!3;DOID:4045!5.06e-09!3|ontology_enrichment_disease_v019_2=DOID:0060100,2.53e-27,3;DOID:4045,2.53e-27,3;DOID:0050686,4.99e-14,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.46e-09,9;UBERON:0002036,1.46e-09,9;UBERON:0002385,1.46e-09,9;UBERON:0000486,1.46e-09,9;UBERON:0007503,1.46e-09,9;UBERON:0001015,1.46e-09,9;UBERON:0002329,1.46e-09,9;UBERON:0003082,1.46e-09,9;UBERON:0003059,1.46e-09,9;UBERON:0007282,1.46e-09,9;UBERON:0004290,1.46e-09,9;UBERON:0009618,1.46e-09,9;UBERON:0000383,1.16e-08,10;UBERON:0007524,6.32e-08,11;UBERON:0003077,6.32e-08,11;UBERON:0007285,6.32e-08,11|phase1_expression=0,0,0,0,0,0,0,0,0,0.468129052643987,0.513653904676515,0.159544317990673,1.02720437958723,0.874204024189974,0,0,0,0.473193248037357,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27797446105362,5.4693474116666,4.18818995179039,17.6469446409304,15.7100461540443,2.91306211818692,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.742210695324124,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0.318909537314974,0,1.20879487306127,1.3018415272336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69465656691056,0,0,0,0,0,0,0,0,0.512612642393558,0,0.370389054739423,0,0.136694227721025,0,0,0,0.414599921413271,0,0.158167996790568,0,0,0,0,0.539457385539283,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Cxcr1}} | ||
|EntrezGene=227288 | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=Q810W6 | |||
|association_with_transcript=-22bp_to_ENSMUST00000053389,NM_178241,uc007blm.1_5end | |||
|description=CAGE_peak_1_at_Cxcr1_5end | |||
|id=chr1:74241227..74241232,- | |||
|ontology_enrichment_celltype=CL:0000791!1.07e-12!9;CL:0000789!1.07e-12!9;CL:0002420!1.07e-12!9;CL:0002419!1.07e-12!9;CL:0000790!1.07e-12!9;CL:0000838!7.09e-12!12;CL:0000542!7.42e-11!13;CL:0000051!7.42e-11!13;CL:0000624!8.82e-11!8;CL:0000893!3.00e-10!6;CL:0002489!3.00e-10!6;CL:0000898!3.00e-10!6;CL:0000809!3.00e-10!6;CL:0000810!3.00e-10!6;CL:0000895!3.00e-10!6;CL:0000808!3.00e-10!6;CL:0000894!3.00e-10!6;CL:0000806!3.00e-10!6;CL:0000807!3.00e-10!6;CL:0000805!3.00e-10!6;CL:0002425!3.00e-10!6;CL:0002436!3.00e-10!6;CL:0002427!3.00e-10!6;CL:0002428!3.00e-10!6;CL:0002429!3.00e-10!6;CL:0002433!3.00e-10!6;CL:0002431!3.00e-10!6;CL:0002432!3.00e-10!6;CL:0000084!3.40e-10!11;CL:0000827!3.40e-10!11;CL:0000738!5.56e-08!17;CL:0002087!5.56e-08!17;CL:0002031!8.26e-08!25;CL:0000988!7.11e-07!32;CL:0002032!7.11e-07!32;CL:0000037!7.11e-07!32;CL:0000566!7.11e-07!32;CL:0000837!7.11e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.46e-09,9 | |||
|ontology_enrichment_disease=DOID:0060100!5.06e-09!3;DOID:4045!5.06e-09!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.53e-27,3;DOID:4045,2.53e-27,3;DOID:0050686,4.99e-14,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.46e-09,9;UBERON:0002036,1.46e-09,9;UBERON:0002385,1.46e-09,9;UBERON:0000486,1.46e-09,9;UBERON:0007503,1.46e-09,9;UBERON:0001015,1.46e-09,9;UBERON:0002329,1.46e-09,9;UBERON:0003082,1.46e-09,9;UBERON:0003059,1.46e-09,9;UBERON:0007282,1.46e-09,9;UBERON:0004290,1.46e-09,9;UBERON:0009618,1.46e-09,9;UBERON:0000383,1.16e-08,10;UBERON:0007524,6.32e-08,11;UBERON:0003077,6.32e-08,11;UBERON:0007285,6.32e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.468129052643987,0.513653904676515,0.159544317990673,1.02720437958723,0.874204024189974,0,0,0,0.473193248037357,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27797446105362,5.4693474116666,4.18818995179039,17.6469446409304,15.7100461540443,2.91306211818692,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.742210695324124,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0.318909537314974,0,1.20879487306127,1.3018415272336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69465656691056,0,0,0,0,0,0,0,0,0.512612642393558,0,0.370389054739423,0,0.136694227721025,0,0,0,0.414599921413271,0,0.158167996790568,0,0,0,0,0.539457385539283,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Cxcr1 | |||
}} |
Revision as of 20:55, 13 September 2013
Short description: | p1@Cxcr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cxcr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | -22bp_to_ENSMUST00000053389, NM_178241, uc007blm.1_5end |
EntrezGene: | Cxcr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.46e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.46e-09 | 9 |
striated muscle tissue | 1.46e-09 | 9 |
muscle tissue | 1.46e-09 | 9 |
multilaminar epithelium | 1.46e-09 | 9 |
epithelial vesicle | 1.46e-09 | 9 |
musculature | 1.46e-09 | 9 |
somite | 1.46e-09 | 9 |
myotome | 1.46e-09 | 9 |
presomitic mesoderm | 1.46e-09 | 9 |
presumptive segmental plate | 1.46e-09 | 9 |
dermomyotome | 1.46e-09 | 9 |
trunk paraxial mesoderm | 1.46e-09 | 9 |
musculature of body | 1.16e-08 | 10 |
dense mesenchyme tissue | 6.32e-08 | 11 |
paraxial mesoderm | 6.32e-08 | 11 |
presumptive paraxial mesoderm | 6.32e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.53e-27 | 3 |
muscle cancer | 2.53e-27 | 3 |
organ system cancer | 4.99e-14 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.