FFCP PHASE1:Mm9::chr5:117583576..117583658,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=330177|HGNC=|MCL_coexpression_id=36|UniProt=Q8BYC6|association_with_transcript=0bp_to_ENSMUST00000092889,ENSMUST00000126813,ENSMUST00000128720,ENSMUST00000145640,ENSMUST00000153709,NM_001081308,NM_183306,uc008zfi.2,uc008zfj.2_5end|description=CAGE_peak_2_at_Taok3_5end|id=chr5:117583576..117583658,+|ontology_enrichment_celltype=CL:0000988!2.44e-13!32;CL:0002032!2.44e-13!32;CL:0000037!2.44e-13!32;CL:0000566!2.44e-13!32;CL:0000837!2.44e-13!32;CL:0002031!8.79e-12!25;CL:0000049!2.45e-08!19;CL:0000763!2.73e-07!16;CL:0000838!4.73e-07!12|ontology_enrichment_celltype_v019_2=CL:0000988,1.46e-13,32;CL:0002032,1.46e-13,32;CL:0000037,1.46e-13,32;CL:0000837,1.46e-13,32;CL:0002031,5.65e-12,25;CL:0000049,1.83e-08,19;CL:0000763,2.13e-07,16;CL:0000838,3.72e-07,12;CL:0002320,8.93e-07,46;CL:0000134,8.93e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.60e-17!48;UBERON:0002390!4.58e-16!45;UBERON:0003061!4.58e-16!45;UBERON:0002405!4.86e-16!70;UBERON:0001007!4.31e-15!128;UBERON:0001555!4.31e-15!128;UBERON:0007026!4.31e-15!128;UBERON:0004119!9.52e-15!130;UBERON:0000925!9.52e-15!130;UBERON:0006595!9.52e-15!130;UBERON:0004921!1.74e-14!126;UBERON:0004185!1.74e-14!126;UBERON:0004177!2.73e-10!29;UBERON:0001041!8.32e-10!92;UBERON:0005057!3.29e-09!51;UBERON:0000077!3.39e-09!97;UBERON:0005911!1.81e-08!69;UBERON:0003408!1.51e-07!24;UBERON:0002370!1.78e-07!23;UBERON:0000974!1.78e-07!23;UBERON:0004807!1.78e-07!23;UBERON:0005058!1.78e-07!23;UBERON:0003351!1.78e-07!23;UBERON:0009113!1.78e-07!23;UBERON:0003295!1.78e-07!23;UBERON:0009722!1.78e-07!23;UBERON:0005562!1.78e-07!23;UBERON:0007690!1.78e-07!23;UBERON:0001004!2.09e-07!42;UBERON:0000065!2.70e-07!41;UBERON:0006562!4.26e-07!24;UBERON:0001557!4.26e-07!24;UBERON:0001042!4.26e-07!24;UBERON:0008814!4.26e-07!24;UBERON:0009145!4.26e-07!24;UBERON:0003081!5.30e-07!88;UBERON:0003929!6.24e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.32e-18,48;UBERON:0002405,4.32e-18,48;UBERON:0002390,8.13e-17,45;UBERON:0003061,8.13e-17,45;UBERON:0001007,4.30e-16,116;UBERON:0001555,4.30e-16,116;UBERON:0007026,4.30e-16,116;UBERON:0004119,1.07e-15,118;UBERON:0000925,1.07e-15,118;UBERON:0006595,1.07e-15,118;UBERON:0004921,1.80e-15,114;UBERON:0004177,6.55e-11,29;UBERON:0005057,6.55e-11,29;UBERON:0001041,7.84e-11,80;UBERON:0000077,2.61e-09,35;UBERON:0005911,4.47e-09,69;UBERON:0003408,4.47e-08,24;UBERON:0002370,5.21e-08,23;UBERON:0000974,5.21e-08,23;UBERON:0004807,5.21e-08,23;UBERON:0005058,5.21e-08,23;UBERON:0003351,5.21e-08,23;UBERON:0009113,5.21e-08,23;UBERON:0003295,5.21e-08,23;UBERON:0009722,5.21e-08,23;UBERON:0005562,5.21e-08,23;UBERON:0007690,5.21e-08,23;UBERON:0001004,1.07e-07,42;UBERON:0003929,1.29e-07,55;UBERON:0006562,1.33e-07,24;UBERON:0001557,1.33e-07,24;UBERON:0001042,1.33e-07,24;UBERON:0008814,1.33e-07,24;UBERON:0009145,1.33e-07,24;UBERON:0000065,1.39e-07,41;UBERON:0005409,3.73e-07,47;UBERON:0002371,8.69e-07,16;UBERON:0002384,8.93e-07,46|phase1_expression=0.640595388419176,5.23463111459042,4.54999239389536,3.32710632437513,2.50447864973174,14.7733759282463,22.8940387783615,55.5230290798778,25.3419699873,28.7899367376052,24.6553874244727,25.367546560517,77.8963321186986,72.2092523980918,36.6420737997229,46.7717867670498,34.2785320282792,90.6953725404933,102.97293963791,86.1510993150001,7.82398269389842,38.12772526114,38.3963690034235,20.6390225403495,16.5174682368362,4.59385571292016,9.90752591165872,10.7735616342945,10.6413114895569,8.31699428207772,11.5299865540758,41.9120244483357,39.3641464054125,31.6963362030877,13.8648777480612,11.9688944658114,12.4543307320045,59.012959933904,44.5361146378566,83.2402752918339,82.940639812373,60.7910481613017,72.3410426016419,0,0,0,0,0,0,0,0.139986421625363,0,83.387955210695,87.0434570413613,88.7287629736105,0.771778308107841,1.14613375975503,1.03134418455488,0.202316460859598,0.528990979272033,0.633831403506179,0,0,19.3478439215501,21.7550599764734,13.4991221839759,6.2916023208865,1.92109152660777,0,0,0.420649922702764,0.285650984403804,0.220868540951614,0.122490799214954,0.191690942036473,0,1.10115880999389,0.255374676170375,0.46081959976873,0,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.61119299110724,0.589257170947335,0.569486723196412,0.559198337475902,1.66597625333005,0.0755715601067855,11.8844440367688,0,0,0.539703191637817,0,0,11.5164424508037,0,0,0,0.14084341977668,0,0,0,1.94841936910093,2.53359865475099,1.51657333504435,8.22123933977232,177.890326065607,9.20341262201914,2.60227990149204,4.56698217468212,1.38369298353635,1.20578112442098,1.99900802130698,2.13633205260448,0.247194967734374,9.25435884287435,64.5765702923408,11.0001457964238,28.4885558813908,24.7286379098963,18.6391761218122,0.585561594023094,0,17.1156226989756,42.055108701578,19.196887391789,36.0879444887504,0.898743836428936,0.457500602818626,0.251308704225729,0.869121600961382,2.55715457330331,1.0389402227978,0.648965052271031,2.03678727700633,30.728521740693,2.52722758433675,4.62972082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| ||
|EntrezGene=330177 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt=Q8BYC6 | |||
|association_with_transcript=0bp_to_ENSMUST00000092889,ENSMUST00000126813,ENSMUST00000128720,ENSMUST00000145640,ENSMUST00000153709,NM_001081308,NM_183306,uc008zfi.2,uc008zfj.2_5end | |||
|description=CAGE_peak_2_at_Taok3_5end | |||
|id=chr5:117583576..117583658,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.44e-13!32;CL:0002032!2.44e-13!32;CL:0000037!2.44e-13!32;CL:0000566!2.44e-13!32;CL:0000837!2.44e-13!32;CL:0002031!8.79e-12!25;CL:0000049!2.45e-08!19;CL:0000763!2.73e-07!16;CL:0000838!4.73e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.46e-13,32;CL:0002032,1.46e-13,32;CL:0000037,1.46e-13,32;CL:0000837,1.46e-13,32;CL:0002031,5.65e-12,25;CL:0000049,1.83e-08,19;CL:0000763,2.13e-07,16;CL:0000838,3.72e-07,12;CL:0002320,8.93e-07,46;CL:0000134,8.93e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.60e-17!48;UBERON:0002390!4.58e-16!45;UBERON:0003061!4.58e-16!45;UBERON:0002405!4.86e-16!70;UBERON:0001007!4.31e-15!128;UBERON:0001555!4.31e-15!128;UBERON:0007026!4.31e-15!128;UBERON:0004119!9.52e-15!130;UBERON:0000925!9.52e-15!130;UBERON:0006595!9.52e-15!130;UBERON:0004921!1.74e-14!126;UBERON:0004185!1.74e-14!126;UBERON:0004177!2.73e-10!29;UBERON:0001041!8.32e-10!92;UBERON:0005057!3.29e-09!51;UBERON:0000077!3.39e-09!97;UBERON:0005911!1.81e-08!69;UBERON:0003408!1.51e-07!24;UBERON:0002370!1.78e-07!23;UBERON:0000974!1.78e-07!23;UBERON:0004807!1.78e-07!23;UBERON:0005058!1.78e-07!23;UBERON:0003351!1.78e-07!23;UBERON:0009113!1.78e-07!23;UBERON:0003295!1.78e-07!23;UBERON:0009722!1.78e-07!23;UBERON:0005562!1.78e-07!23;UBERON:0007690!1.78e-07!23;UBERON:0001004!2.09e-07!42;UBERON:0000065!2.70e-07!41;UBERON:0006562!4.26e-07!24;UBERON:0001557!4.26e-07!24;UBERON:0001042!4.26e-07!24;UBERON:0008814!4.26e-07!24;UBERON:0009145!4.26e-07!24;UBERON:0003081!5.30e-07!88;UBERON:0003929!6.24e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.32e-18,48;UBERON:0002405,4.32e-18,48;UBERON:0002390,8.13e-17,45;UBERON:0003061,8.13e-17,45;UBERON:0001007,4.30e-16,116;UBERON:0001555,4.30e-16,116;UBERON:0007026,4.30e-16,116;UBERON:0004119,1.07e-15,118;UBERON:0000925,1.07e-15,118;UBERON:0006595,1.07e-15,118;UBERON:0004921,1.80e-15,114;UBERON:0004177,6.55e-11,29;UBERON:0005057,6.55e-11,29;UBERON:0001041,7.84e-11,80;UBERON:0000077,2.61e-09,35;UBERON:0005911,4.47e-09,69;UBERON:0003408,4.47e-08,24;UBERON:0002370,5.21e-08,23;UBERON:0000974,5.21e-08,23;UBERON:0004807,5.21e-08,23;UBERON:0005058,5.21e-08,23;UBERON:0003351,5.21e-08,23;UBERON:0009113,5.21e-08,23;UBERON:0003295,5.21e-08,23;UBERON:0009722,5.21e-08,23;UBERON:0005562,5.21e-08,23;UBERON:0007690,5.21e-08,23;UBERON:0001004,1.07e-07,42;UBERON:0003929,1.29e-07,55;UBERON:0006562,1.33e-07,24;UBERON:0001557,1.33e-07,24;UBERON:0001042,1.33e-07,24;UBERON:0008814,1.33e-07,24;UBERON:0009145,1.33e-07,24;UBERON:0000065,1.39e-07,41;UBERON:0005409,3.73e-07,47;UBERON:0002371,8.69e-07,16;UBERON:0002384,8.93e-07,46 | |||
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| |||
|short_description=p2@Taok3 | |||
}} |
Revision as of 06:10, 14 September 2013
Short description: | p2@Taok3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Taok3_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000092889, ENSMUST00000126813, ENSMUST00000128720, ENSMUST00000145640, ENSMUST00000153709, NM_001081308, NM_183306, uc008zfi.2, uc008zfj.2_5end |
EntrezGene: | Taok3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.46e-13 | 32 |
hematopoietic oligopotent progenitor cell | 1.46e-13 | 32 |
hematopoietic stem cell | 1.46e-13 | 32 |
hematopoietic multipotent progenitor cell | 1.46e-13 | 32 |
hematopoietic lineage restricted progenitor cell | 5.65e-12 | 25 |
common myeloid progenitor | 1.83e-08 | 19 |
myeloid cell | 2.13e-07 | 16 |
lymphoid lineage restricted progenitor cell | 3.72e-07 | 12 |
connective tissue cell | 8.93e-07 | 46 |
mesenchymal cell | 8.93e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.