FFCP PHASE1:Mm9::chr18:55149735..55149776,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=269023|HGNC=|MCL_coexpression_id=1720|UniProt=Q56A10,B9EKR3|association_with_transcript=57bp_to_ENSMUST00000064763,NM_175751,uc008eyc.2_5end|description=CAGE_peak_4_at_Zfp608_5end|id=chr18:55149735..55149776,-|ontology_enrichment_celltype=CL:0000540!1.59e-12!33;CL:0000047!1.59e-12!33;CL:0000031!1.59e-12!33;CL:0000404!1.59e-12!33;CL:0000221!3.06e-12!44;CL:0000133!3.06e-12!44;CL:0002319!9.45e-12!43;CL:0000393!6.34e-10!39;CL:0000211!6.34e-10!39;CL:0000117!3.01e-09!23;CL:0000337!3.01e-09!23;CL:0000055!5.55e-09!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.90e-13,33;CL:0000047,1.90e-13,33;CL:0000031,1.90e-13,33;CL:0000404,1.90e-13,33;CL:0000221,1.69e-12,44;CL:0000133,1.69e-12,44;CL:0002319,5.63e-12,43;CL:0000393,2.20e-10,39;CL:0000211,2.20e-10,39;CL:0000117,6.76e-10,23;CL:0000337,6.76e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.42e-16!75;UBERON:0001016!4.42e-16!75;UBERON:0001017!6.93e-16!73;UBERON:0005743!6.93e-16!73;UBERON:0004121!2.87e-15!102;UBERON:0000924!2.87e-15!102;UBERON:0006601!2.87e-15!102;UBERON:0002346!1.09e-12!71;UBERON:0003075!1.09e-12!71;UBERON:0007284!1.09e-12!71;UBERON:0000033!1.20e-12!63;UBERON:0003056!7.29e-12!49;UBERON:0001049!3.55e-10!52;UBERON:0005068!3.55e-10!52;UBERON:0006241!3.55e-10!52;UBERON:0007135!3.55e-10!52;UBERON:0000955!3.00e-09!50;UBERON:0006238!3.00e-09!50;UBERON:0002616!1.02e-08!49;UBERON:0002780!4.83e-08!39;UBERON:0001890!4.83e-08!39;UBERON:0006240!4.83e-08!39;UBERON:0003080!5.92e-08!40;UBERON:0002020!9.65e-08!34|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.42e-17,95;UBERON:0000924,2.42e-17,95;UBERON:0006601,2.42e-17,95;UBERON:0001016,4.48e-16,75;UBERON:0001017,7.37e-16,73;UBERON:0002346,5.27e-15,64;UBERON:0003075,5.27e-15,64;UBERON:0007284,5.27e-15,64;UBERON:0010371,7.70e-14,73;UBERON:0003056,1.38e-11,49;UBERON:0010314,1.32e-10,92;UBERON:0000073,2.07e-10,54;UBERON:0001049,4.63e-10,52;UBERON:0005068,4.63e-10,52;UBERON:0006241,4.63e-10,52;UBERON:0007135,4.63e-10,52;UBERON:0000955,1.22e-08,47;UBERON:0006238,1.22e-08,47;UBERON:0002616,4.33e-08,46;UBERON:0002780,9.15e-08,39;UBERON:0001890,9.15e-08,39;UBERON:0006240,9.15e-08,39;UBERON:0003080,1.10e-07,40;UBERON:0002020,2.08e-07,34|phase1_expression=4.00372117761985,0,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0.129123323441576,0.140788722151667,0,0,0,0,0,0,0.607425802169478,0,2.99689057090326,1.7824876368746,2.97072756258621,1.36069264241712,1.48936426801328,0.522399578277871,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0.866554859253824,0.831173226792462,0,4.60384793810598,5.4693474116666,3.14114246384279,3.52938892818609,5.46436387966757,2.91306211818692,0.251793635951155,0.405507724878058,0.183546752161682,2.34717403304412,1.96222640742402,0.878744730937887,2.52758868796568,0.839918529752175,4.31257693094915,3.18786951509699,0,0,0.771778308107841,2.0057340795713,2.57836046138721,5.66486090406874,7.40587370980846,3.80298842103708,0,0,0.899899717281399,0.988866362566974,0,1.49800055259202,1.15265491596466,6.53244557543409,4.45519596494579,3.99617426567626,2.57085885963423,3.75476519617743,8.45186514583183,9.00947427571422,9.19218786610021,4.40463523997555,2.17068474744819,1.68967186581868,6.72620067423989,5.94669683415663,5.2091337055676,1.67509799400829,1.68828783009504,2.75036845998258,6.77645746589436,6.54909731675874,4.28718725398191,2.04460721999597,2.49386148352392,6.95674772884027,0,0,0,0,0,0.702222100658759,0.340860645156116,0,0.35333957451034,5.35204995151386,1.28326477414318,2.54805239706646,0,0.865964164044856,0.253359865475099,0.505524445014783,0.22836775943812,2.58937883647172,0.593768556259299,1.04091196059682,0.304465478312141,0.691846491768175,1.3565037649736,1.29347577849275,0.376999773989026,0,0,0,0.970601099684455,1.98757366614354,1.93950101254089,0,1.17112318804619,1.46612694769419,0.255457055208591,5.63131085177825,2.99951365496704,3.81210681219194,1.49790639404823,3.20250421973039,4.64921102817598,1.04294592115366,2.04572365864264,3.53239675751252,3.73154905055843,0.305518091550949,1.49288364732112,0.252722758433675,0.631325567659422,9.36867189331467,8.73627996847197,12.4242869565691,17.4817588689429,20.0707672496417,26.9038812598185,18.3655380137068,3.88055056108524,4.52692785158969,2.26927296201383,2.81521798662318,1.31517439456545,3.05851974148158,4.179025998266,3.49829631893504,0.59710280045548,1.40442637462647,1.28673953557358,1.13665399758237,1.86413195281952,4.22146907965973,3.6012412292203,4.02466050494857,1.96764231747404,1.69693824176116,0.930135779001631,2.14618721119695,1.16765342367169,0.987359099480883,0.656669856316381,0.486412857275134,1.16959989940266,0.658650345873152,0.536825675041487,6.09840850835969,8.54108282748061,0.330418782983798,0.528901133327089,1.49301775374664,0.928946687441754,1.28867461322093,1.00841762311671,1.11189021922435,0.570676878337677,0.474529061544512,0.988193728344065,1.75934646160189,0.994782360205754,0.389928174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| ||
|EntrezGene=269023 | |||
|HGNC= | |||
|MCL_coexpression_id=1720 | |||
|UniProt=Q56A10,B9EKR3 | |||
|association_with_transcript=57bp_to_ENSMUST00000064763,NM_175751,uc008eyc.2_5end | |||
|description=CAGE_peak_4_at_Zfp608_5end | |||
|id=chr18:55149735..55149776,- | |||
|ontology_enrichment_celltype=CL:0000540!1.59e-12!33;CL:0000047!1.59e-12!33;CL:0000031!1.59e-12!33;CL:0000404!1.59e-12!33;CL:0000221!3.06e-12!44;CL:0000133!3.06e-12!44;CL:0002319!9.45e-12!43;CL:0000393!6.34e-10!39;CL:0000211!6.34e-10!39;CL:0000117!3.01e-09!23;CL:0000337!3.01e-09!23;CL:0000055!5.55e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.90e-13,33;CL:0000047,1.90e-13,33;CL:0000031,1.90e-13,33;CL:0000404,1.90e-13,33;CL:0000221,1.69e-12,44;CL:0000133,1.69e-12,44;CL:0002319,5.63e-12,43;CL:0000393,2.20e-10,39;CL:0000211,2.20e-10,39;CL:0000117,6.76e-10,23;CL:0000337,6.76e-10,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.42e-16!75;UBERON:0001016!4.42e-16!75;UBERON:0001017!6.93e-16!73;UBERON:0005743!6.93e-16!73;UBERON:0004121!2.87e-15!102;UBERON:0000924!2.87e-15!102;UBERON:0006601!2.87e-15!102;UBERON:0002346!1.09e-12!71;UBERON:0003075!1.09e-12!71;UBERON:0007284!1.09e-12!71;UBERON:0000033!1.20e-12!63;UBERON:0003056!7.29e-12!49;UBERON:0001049!3.55e-10!52;UBERON:0005068!3.55e-10!52;UBERON:0006241!3.55e-10!52;UBERON:0007135!3.55e-10!52;UBERON:0000955!3.00e-09!50;UBERON:0006238!3.00e-09!50;UBERON:0002616!1.02e-08!49;UBERON:0002780!4.83e-08!39;UBERON:0001890!4.83e-08!39;UBERON:0006240!4.83e-08!39;UBERON:0003080!5.92e-08!40;UBERON:0002020!9.65e-08!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.42e-17,95;UBERON:0000924,2.42e-17,95;UBERON:0006601,2.42e-17,95;UBERON:0001016,4.48e-16,75;UBERON:0001017,7.37e-16,73;UBERON:0002346,5.27e-15,64;UBERON:0003075,5.27e-15,64;UBERON:0007284,5.27e-15,64;UBERON:0010371,7.70e-14,73;UBERON:0003056,1.38e-11,49;UBERON:0010314,1.32e-10,92;UBERON:0000073,2.07e-10,54;UBERON:0001049,4.63e-10,52;UBERON:0005068,4.63e-10,52;UBERON:0006241,4.63e-10,52;UBERON:0007135,4.63e-10,52;UBERON:0000955,1.22e-08,47;UBERON:0006238,1.22e-08,47;UBERON:0002616,4.33e-08,46;UBERON:0002780,9.15e-08,39;UBERON:0001890,9.15e-08,39;UBERON:0006240,9.15e-08,39;UBERON:0003080,1.10e-07,40;UBERON:0002020,2.08e-07,34 | |||
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| |||
|short_description=p4@Zfp608 | |||
}} |
Revision as of 16:21, 13 September 2013
Short description: | p4@Zfp608 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Zfp608_5end |
Coexpression cluster: | MCL_coexpression_mm9:1720 |
Association with transcript: | 57bp_to_ENSMUST00000064763, NM_175751, uc008eyc.2_5end |
EntrezGene: | Zfp608 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.90e-13 | 33 |
neuronal stem cell | 1.90e-13 | 33 |
neuroblast | 1.90e-13 | 33 |
electrically signaling cell | 1.90e-13 | 33 |
ectodermal cell | 1.69e-12 | 44 |
neurectodermal cell | 1.69e-12 | 44 |
neural cell | 5.63e-12 | 43 |
electrically responsive cell | 2.20e-10 | 39 |
electrically active cell | 2.20e-10 | 39 |
CNS neuron (sensu Vertebrata) | 6.76e-10 | 23 |
neuroblast (sensu Vertebrata) | 6.76e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.42e-17 | 95 |
ectoderm | 2.42e-17 | 95 |
presumptive ectoderm | 2.42e-17 | 95 |
nervous system | 4.48e-16 | 75 |
central nervous system | 7.37e-16 | 73 |
neurectoderm | 5.27e-15 | 64 |
neural plate | 5.27e-15 | 64 |
presumptive neural plate | 5.27e-15 | 64 |
ecto-epithelium | 7.70e-14 | 73 |
pre-chordal neural plate | 1.38e-11 | 49 |
structure with developmental contribution from neural crest | 1.32e-10 | 92 |
regional part of nervous system | 2.07e-10 | 54 |
neural tube | 4.63e-10 | 52 |
neural rod | 4.63e-10 | 52 |
future spinal cord | 4.63e-10 | 52 |
neural keel | 4.63e-10 | 52 |
brain | 1.22e-08 | 47 |
future brain | 1.22e-08 | 47 |
regional part of brain | 4.33e-08 | 46 |
regional part of forebrain | 9.15e-08 | 39 |
forebrain | 9.15e-08 | 39 |
future forebrain | 9.15e-08 | 39 |
anterior neural tube | 1.10e-07 | 40 |
gray matter | 2.08e-07 | 34 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.