FFCP PHASE1:Mm9::chr1:182779290..182779301,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:182779290..182779301,+|id=chr1:182779290..182779301,+|ontology_enrichment_celltype=CL:0000988!4.60e-19!32;CL:0002032!4.60e-19!32;CL:0000037!4.60e-19!32;CL:0000566!4.60e-19!32;CL:0000837!4.60e-19!32;CL:0000219!5.56e-14!54;CL:0002320!1.02e-13!46;CL:0000134!1.02e-13!46;CL:0000049!6.45e-12!19;CL:0000034!6.82e-12!97;CL:0000144!3.29e-10!121;CL:0000012!3.29e-10!121;CL:0002031!1.21e-09!25;CL:0000723!1.64e-09!91;CL:0000048!1.64e-09!91;CL:0000838!5.72e-09!12;CL:0000063!2.57e-08!66;CL:0000542!3.33e-08!13;CL:0000051!3.33e-08!13;CL:0002371!1.01e-07!118;CL:0000215!1.45e-07!3;CL:0000084!3.34e-07!11;CL:0000827!3.34e-07!11;CL:0000763!5.18e-07!16;CL:0000355!7.71e-07!9|ontology_enrichment_celltype_v019_2=CL:0000557,7.62e-10,7;CL:0000049,1.83e-09,19;CL:0000945,2.44e-08,1;CL:0000236,2.44e-08,1;CL:0000826,2.44e-08,1;CL:0000355,4.59e-08,9;CL:0000988,8.00e-08,32;CL:0002032,8.00e-08,32;CL:0000037,8.00e-08,32;CL:0000837,8.00e-08,32|ontology_enrichment_disease=DOID:0060100!4.02e-09!3;DOID:4045!4.02e-09!3;DOID:0050686!1.69e-07!6|ontology_enrichment_disease_v019_2=DOID:0060100,5.59e-23,3;DOID:4045,5.59e-23,3;DOID:0050686,8.07e-12,6|ontology_enrichment_uberon=UBERON:0002384!1.02e-13!46;UBERON:0002204!1.58e-07!32;UBERON:0001134!7.71e-07!9;UBERON:0002036!7.71e-07!9;UBERON:0002385!7.71e-07!9;UBERON:0000486!7.71e-07!9;UBERON:0001015!7.71e-07!9;UBERON:0004290!7.71e-07!9;UBERON:0003082!7.71e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.59e-08,9;UBERON:0002036,4.59e-08,9;UBERON:0002385,4.59e-08,9;UBERON:0000486,4.59e-08,9;UBERON:0007503,4.59e-08,9;UBERON:0001015,4.59e-08,9;UBERON:0002329,4.59e-08,9;UBERON:0003082,4.59e-08,9;UBERON:0003059,4.59e-08,9;UBERON:0007282,4.59e-08,9;UBERON:0004290,4.59e-08,9;UBERON:0009618,4.59e-08,9;UBERON:0002204,5.11e-08,32;UBERON:0000383,2.61e-07,10|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.140788722151667,0.234064526321993,0,0,0,0.262261207256992,0,0,0,0.315462165358238,0.411343300817216,0.84877930359606,0,0.595745707205312,0.261199789138935,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,13.393012183581,9.37602413428561,5.75876118371178,39.999741186109,13.6609096991689,14.5653105909346,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,1.51004345451963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.453429360640713,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718890747035522,1.79970819298022,1.77898317902291,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,2.57347907114715,2.27330799516474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.679913719975421,0.279902904647316,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr1:182779290..182779301,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:182779290..182779301,+ | |||
|id=chr1:182779290..182779301,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.60e-19!32;CL:0002032!4.60e-19!32;CL:0000037!4.60e-19!32;CL:0000566!4.60e-19!32;CL:0000837!4.60e-19!32;CL:0000219!5.56e-14!54;CL:0002320!1.02e-13!46;CL:0000134!1.02e-13!46;CL:0000049!6.45e-12!19;CL:0000034!6.82e-12!97;CL:0000144!3.29e-10!121;CL:0000012!3.29e-10!121;CL:0002031!1.21e-09!25;CL:0000723!1.64e-09!91;CL:0000048!1.64e-09!91;CL:0000838!5.72e-09!12;CL:0000063!2.57e-08!66;CL:0000542!3.33e-08!13;CL:0000051!3.33e-08!13;CL:0002371!1.01e-07!118;CL:0000215!1.45e-07!3;CL:0000084!3.34e-07!11;CL:0000827!3.34e-07!11;CL:0000763!5.18e-07!16;CL:0000355!7.71e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,7.62e-10,7;CL:0000049,1.83e-09,19;CL:0000945,2.44e-08,1;CL:0000236,2.44e-08,1;CL:0000826,2.44e-08,1;CL:0000355,4.59e-08,9;CL:0000988,8.00e-08,32;CL:0002032,8.00e-08,32;CL:0000037,8.00e-08,32;CL:0000837,8.00e-08,32 | |||
|ontology_enrichment_disease=DOID:0060100!4.02e-09!3;DOID:4045!4.02e-09!3;DOID:0050686!1.69e-07!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.59e-23,3;DOID:4045,5.59e-23,3;DOID:0050686,8.07e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.02e-13!46;UBERON:0002204!1.58e-07!32;UBERON:0001134!7.71e-07!9;UBERON:0002036!7.71e-07!9;UBERON:0002385!7.71e-07!9;UBERON:0000486!7.71e-07!9;UBERON:0001015!7.71e-07!9;UBERON:0004290!7.71e-07!9;UBERON:0003082!7.71e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.59e-08,9;UBERON:0002036,4.59e-08,9;UBERON:0002385,4.59e-08,9;UBERON:0000486,4.59e-08,9;UBERON:0007503,4.59e-08,9;UBERON:0001015,4.59e-08,9;UBERON:0002329,4.59e-08,9;UBERON:0003082,4.59e-08,9;UBERON:0003059,4.59e-08,9;UBERON:0007282,4.59e-08,9;UBERON:0004290,4.59e-08,9;UBERON:0009618,4.59e-08,9;UBERON:0002204,5.11e-08,32;UBERON:0000383,2.61e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.140788722151667,0.234064526321993,0,0,0,0.262261207256992,0,0,0,0.315462165358238,0.411343300817216,0.84877930359606,0,0.595745707205312,0.261199789138935,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,13.393012183581,9.37602413428561,5.75876118371178,39.999741186109,13.6609096991689,14.5653105909346,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,1.51004345451963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.453429360640713,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718890747035522,1.79970819298022,1.77898317902291,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,2.57347907114715,2.27330799516474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.679913719975421,0.279902904647316,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr1:182779290..182779301,+ | |||
}} |
Revision as of 19:56, 13 September 2013
Short description: | p@chr1:182779290..182779301, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:182779290..182779301, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 7.62e-10 | 7 |
common myeloid progenitor | 1.83e-09 | 19 |
lymphocyte of B lineage | 2.44e-08 | 1 |
B cell | 2.44e-08 | 1 |
pro-B cell | 2.44e-08 | 1 |
multi-potent skeletal muscle stem cell | 4.59e-08 | 9 |
hematopoietic cell | 8.00e-08 | 32 |
hematopoietic oligopotent progenitor cell | 8.00e-08 | 32 |
hematopoietic stem cell | 8.00e-08 | 32 |
hematopoietic multipotent progenitor cell | 8.00e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.59e-08 | 9 |
striated muscle tissue | 4.59e-08 | 9 |
muscle tissue | 4.59e-08 | 9 |
multilaminar epithelium | 4.59e-08 | 9 |
epithelial vesicle | 4.59e-08 | 9 |
musculature | 4.59e-08 | 9 |
somite | 4.59e-08 | 9 |
myotome | 4.59e-08 | 9 |
presomitic mesoderm | 4.59e-08 | 9 |
presumptive segmental plate | 4.59e-08 | 9 |
dermomyotome | 4.59e-08 | 9 |
trunk paraxial mesoderm | 4.59e-08 | 9 |
musculoskeletal system | 5.11e-08 | 32 |
musculature of body | 2.61e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.59e-23 | 3 |
muscle cancer | 5.59e-23 | 3 |
organ system cancer | 8.07e-12 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.