Personal tools

FFCP PHASE1:Mm9::chr4:13670441..13670463,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=12395|HGNC=|MCL_coexpression_id=22|UniProt=Q3UQX8|association_with_transcript=0bp_to_NM_001111026,uc008sau.2_5end|description=CAGE_peak_8_at_Runx1t1_5end|id=chr4:13670441..13670463,+|ontology_enrichment_celltype=CL:0000117!3.11e-11!23;CL:0000337!3.11e-11!23;CL:0000540!1.05e-07!33;CL:0000047!1.05e-07!33;CL:0000031!1.05e-07!33;CL:0000404!1.05e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.21e-13,23;CL:0000337,2.21e-13,23;CL:0000540,8.05e-09,33;CL:0000047,8.05e-09,33;CL:0000031,8.05e-09,33;CL:0000404,8.05e-09,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!3.05e-11!49;UBERON:0001049!1.55e-10!52;UBERON:0005068!1.55e-10!52;UBERON:0006241!1.55e-10!52;UBERON:0007135!1.55e-10!52;UBERON:0002020!3.66e-10!34;UBERON:0002346!5.44e-10!71;UBERON:0003075!5.44e-10!71;UBERON:0007284!5.44e-10!71;UBERON:0003080!1.52e-09!40;UBERON:0002780!3.70e-09!39;UBERON:0001890!3.70e-09!39;UBERON:0006240!3.70e-09!39;UBERON:0000033!1.08e-08!63;UBERON:0001017!1.55e-08!73;UBERON:0005743!1.55e-08!73;UBERON:0000073!4.50e-08!75;UBERON:0001016!4.50e-08!75;UBERON:0002616!8.20e-08!49;UBERON:0000955!8.44e-08!50;UBERON:0006238!8.44e-08!50;UBERON:0000468!1.03e-07!333;UBERON:0002791!1.16e-07!29;UBERON:0003528!1.16e-07!29;UBERON:0001893!1.16e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.73e-10,34;UBERON:0002346,6.48e-10,64;UBERON:0003075,6.48e-10,64;UBERON:0007284,6.48e-10,64;UBERON:0003056,1.98e-09,49;UBERON:0001049,1.50e-08,52;UBERON:0005068,1.50e-08,52;UBERON:0006241,1.50e-08,52;UBERON:0007135,1.50e-08,52;UBERON:0003080,4.23e-08,40;UBERON:0000073,5.41e-08,54;UBERON:0010371,1.02e-07,73;UBERON:0002780,1.52e-07,39;UBERON:0001890,1.52e-07,39;UBERON:0006240,1.52e-07,39;UBERON:0003528,2.42e-07,29;UBERON:0002791,2.42e-07,29;UBERON:0001893,2.42e-07,29;UBERON:0001017,4.01e-07,73;UBERON:0001016,9.70e-07,75|phase1_expression=0.80074423552397,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,8.6996078169627,6.34789175126439,3.1691570175309,0,0,0,0,0,0,0,4.14758449233911,2.8351247049655,2.94454945891935,0.856952953211411,1.10434270475807,2.32732518508413,3.92966431174769,0.919218786610021,0,0.638436690425939,0.768032666281217,4.87979264601717,4.39140689291566,4.16730696445408,0.279182999001381,0.56276261003168,1.37518422999129,4.41942878210502,3.70166370077668,6.52398060388552,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.29688427812965,0.346970653532272,0,0.230615497256059,0.150722640552623,0,0,0,0.144599356919912,0,0.647067399789637,0,0,0,0,0.41889341362691,0,0,0,0,1.19832511523858,0.457500602818626,4.39790232395025,0.521472960576829,0.767146371990992,1.0389402227978,0.811206315338788,0.81471491080253,0.124406970610093,0,0.841767423545896,0.390361328888111,0.229902104433473,0.360124259610698,2.41127708537144,2.78949646520444,2.3060469651273,1.87403449119458,0,1.07783996466421,2.26927296201383,2.28736461413134,1.31517439456545,1.94633074457919,1.0447564995665,0.823128545631774,0.995171334092466,0,0,0,1.24275463521301,0.469052119962192,0.720248245844059,1.18372367792605,0.393528463494808,0.925602677324269,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.243206428637567,0.438599962275997,0,0.402619256281115,0.420579897128254,2.88132914661996,0,0,3.41261200856374,1.85789337488351,1.15980715189884,0.605050573870028,0.444756087689741,0.380451252225118,1.42358718463353,0.329397909448022,0.754005626400808,0.198956472041151,0.38992817423824,0,0,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0.500535317148282,0.393117990226406,0.449724224769707,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.369506380333209,1.70542270593436,0.651859905768103,0.848725428875941,0,0.335012514883631,0.238043640886014,0.195133647857799,0.788175720530955,0.664394068946325,1.2756381492599,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.321101179975584,0.35163505977661,0.655739781506702,0.252470927204373,0,1.17131623288992,0,0.238968797952552,0.222798674082394,0.566153061577665,0,0,0,0.321321316421807,0,1.42452482933804,0.977321756121456,1.64970122972535,0,1.21390318077491,0.604647113929502,0.754420319023592,0,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,1.36175842301515,1.08036656418786,0.258717367565509,0.857348140126369,1.59606210278046,0.356737635204141,0.658196082408484,0,0,0,0,0,0.322928853391811,0.180938774784468,0.238744688006273,0,0.874442509889552,0.927126510052548,0,0,0,0,0,0,0,0,0,0,2.37251995185852,1.01659733563424,0.756037385752609,0.418176592028937,0.655087691238533,0.674321731924103,0.661227645802687,0.26175594198403,0.129614973291793,0,0,0.897099276263873,0.330916980914195,0.583353565032143,0.387479470433193,0.337912250981556,0.352071715937262,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0,0.549454872801795,0,0,0.564751842617067,1.38097570952153,1.14579102687879,0.859265911718438,0,0,1.35004500046361,1.35096360967266,0.906284817968409,0.51776031175182,1.97195960409936,5.58634822761443,2.39027048055788,0.729320151204882,1.25767897576789,2.38996560985018,0.666740183404846,0.618105171716683,1.92551525755089,0.758091635291392,1.52087579934144,1.88626341386076,1.03005658216871,1.28050304809739,1.95280594449085,1.42888107384922,1.0429589335037,0.964546102318525,0.824171801606613,0.441596760403192,1.02860775715625,0.532427418478012,1.1921809497366,1.88950341622027,0.846984423737976,1.52306294205018,0.73171189149109,1.05227884575137,0.814824683075171,2.24456908663095,1.30498519936592,0.788035859004508,0,1.39443157067369,0.964533054905707,1.49886346762768,0.467863216890817,1.50409737833809,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p8@Runx1t1}}
|EntrezGene=12395
|HGNC=
|MCL_coexpression_id=22
|UniProt=Q3UQX8
|association_with_transcript=0bp_to_NM_001111026,uc008sau.2_5end
|description=CAGE_peak_8_at_Runx1t1_5end
|id=chr4:13670441..13670463,+
|ontology_enrichment_celltype=CL:0000117!3.11e-11!23;CL:0000337!3.11e-11!23;CL:0000540!1.05e-07!33;CL:0000047!1.05e-07!33;CL:0000031!1.05e-07!33;CL:0000404!1.05e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.21e-13,23;CL:0000337,2.21e-13,23;CL:0000540,8.05e-09,33;CL:0000047,8.05e-09,33;CL:0000031,8.05e-09,33;CL:0000404,8.05e-09,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!3.05e-11!49;UBERON:0001049!1.55e-10!52;UBERON:0005068!1.55e-10!52;UBERON:0006241!1.55e-10!52;UBERON:0007135!1.55e-10!52;UBERON:0002020!3.66e-10!34;UBERON:0002346!5.44e-10!71;UBERON:0003075!5.44e-10!71;UBERON:0007284!5.44e-10!71;UBERON:0003080!1.52e-09!40;UBERON:0002780!3.70e-09!39;UBERON:0001890!3.70e-09!39;UBERON:0006240!3.70e-09!39;UBERON:0000033!1.08e-08!63;UBERON:0001017!1.55e-08!73;UBERON:0005743!1.55e-08!73;UBERON:0000073!4.50e-08!75;UBERON:0001016!4.50e-08!75;UBERON:0002616!8.20e-08!49;UBERON:0000955!8.44e-08!50;UBERON:0006238!8.44e-08!50;UBERON:0000468!1.03e-07!333;UBERON:0002791!1.16e-07!29;UBERON:0003528!1.16e-07!29;UBERON:0001893!1.16e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.73e-10,34;UBERON:0002346,6.48e-10,64;UBERON:0003075,6.48e-10,64;UBERON:0007284,6.48e-10,64;UBERON:0003056,1.98e-09,49;UBERON:0001049,1.50e-08,52;UBERON:0005068,1.50e-08,52;UBERON:0006241,1.50e-08,52;UBERON:0007135,1.50e-08,52;UBERON:0003080,4.23e-08,40;UBERON:0000073,5.41e-08,54;UBERON:0010371,1.02e-07,73;UBERON:0002780,1.52e-07,39;UBERON:0001890,1.52e-07,39;UBERON:0006240,1.52e-07,39;UBERON:0003528,2.42e-07,29;UBERON:0002791,2.42e-07,29;UBERON:0001893,2.42e-07,29;UBERON:0001017,4.01e-07,73;UBERON:0001016,9.70e-07,75
|phase1_expression=0.80074423552397,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,8.6996078169627,6.34789175126439,3.1691570175309,0,0,0,0,0,0,0,4.14758449233911,2.8351247049655,2.94454945891935,0.856952953211411,1.10434270475807,2.32732518508413,3.92966431174769,0.919218786610021,0,0.638436690425939,0.768032666281217,4.87979264601717,4.39140689291566,4.16730696445408,0.279182999001381,0.56276261003168,1.37518422999129,4.41942878210502,3.70166370077668,6.52398060388552,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.29688427812965,0.346970653532272,0,0.230615497256059,0.150722640552623,0,0,0,0.144599356919912,0,0.647067399789637,0,0,0,0,0.41889341362691,0,0,0,0,1.19832511523858,0.457500602818626,4.39790232395025,0.521472960576829,0.767146371990992,1.0389402227978,0.811206315338788,0.81471491080253,0.124406970610093,0,0.841767423545896,0.390361328888111,0.229902104433473,0.360124259610698,2.41127708537144,2.78949646520444,2.3060469651273,1.87403449119458,0,1.07783996466421,2.26927296201383,2.28736461413134,1.31517439456545,1.94633074457919,1.0447564995665,0.823128545631774,0.995171334092466,0,0,0,1.24275463521301,0.469052119962192,0.720248245844059,1.18372367792605,0.393528463494808,0.925602677324269,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.243206428637567,0.438599962275997,0,0.402619256281115,0.420579897128254,2.88132914661996,0,0,3.41261200856374,1.85789337488351,1.15980715189884,0.605050573870028,0.444756087689741,0.380451252225118,1.42358718463353,0.329397909448022,0.754005626400808,0.198956472041151,0.38992817423824,0,0,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0.500535317148282,0.393117990226406,0.449724224769707,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.369506380333209,1.70542270593436,0.651859905768103,0.848725428875941,0,0.335012514883631,0.238043640886014,0.195133647857799,0.788175720530955,0.664394068946325,1.2756381492599,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.321101179975584,0.35163505977661,0.655739781506702,0.252470927204373,0,1.17131623288992,0,0.238968797952552,0.222798674082394,0.566153061577665,0,0,0,0.321321316421807,0,1.42452482933804,0.977321756121456,1.64970122972535,0,1.21390318077491,0.604647113929502,0.754420319023592,0,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,1.36175842301515,1.08036656418786,0.258717367565509,0.857348140126369,1.59606210278046,0.356737635204141,0.658196082408484,0,0,0,0,0,0.322928853391811,0.180938774784468,0.238744688006273,0,0.874442509889552,0.927126510052548,0,0,0,0,0,0,0,0,0,0,2.37251995185852,1.01659733563424,0.756037385752609,0.418176592028937,0.655087691238533,0.674321731924103,0.661227645802687,0.26175594198403,0.129614973291793,0,0,0.897099276263873,0.330916980914195,0.583353565032143,0.387479470433193,0.337912250981556,0.352071715937262,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0,0.549454872801795,0,0,0.564751842617067,1.38097570952153,1.14579102687879,0.859265911718438,0,0,1.35004500046361,1.35096360967266,0.906284817968409,0.51776031175182,1.97195960409936,5.58634822761443,2.39027048055788,0.729320151204882,1.25767897576789,2.38996560985018,0.666740183404846,0.618105171716683,1.92551525755089,0.758091635291392,1.52087579934144,1.88626341386076,1.03005658216871,1.28050304809739,1.95280594449085,1.42888107384922,1.0429589335037,0.964546102318525,0.824171801606613,0.441596760403192,1.02860775715625,0.532427418478012,1.1921809497366,1.88950341622027,0.846984423737976,1.52306294205018,0.73171189149109,1.05227884575137,0.814824683075171,2.24456908663095,1.30498519936592,0.788035859004508,0,1.39443157067369,0.964533054905707,1.49886346762768,0.467863216890817,1.50409737833809,0.191288332068843,0.220591419119515,0.231867835620421
|short_description=p8@Runx1t1
}}

Revision as of 04:10, 14 September 2013

Short description:p8@Runx1t1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Runx1t1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 0bp_to_NM_001111026, uc008sau.2_5end
EntrezGene:Runx1t1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Runx1t1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C38.70
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.93
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.88
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.52
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F14.40
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C62.79
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.21e-1323
neuroblast (sensu Vertebrata)2.21e-1323
neuron8.05e-0933
neuronal stem cell8.05e-0933
neuroblast8.05e-0933
electrically signaling cell8.05e-0933

Uber anatomy
Ontology termp-valuen
gray matter2.73e-1034
neurectoderm6.48e-1064
neural plate6.48e-1064
presumptive neural plate6.48e-1064
pre-chordal neural plate1.98e-0949
neural tube1.50e-0852
neural rod1.50e-0852
future spinal cord1.50e-0852
neural keel1.50e-0852
anterior neural tube4.23e-0840
regional part of nervous system5.41e-0854
ecto-epithelium1.02e-0773
regional part of forebrain1.52e-0739
forebrain1.52e-0739
future forebrain1.52e-0739
brain grey matter2.42e-0729
regional part of telencephalon2.42e-0729
telencephalon2.42e-0729
central nervous system4.01e-0773
nervous system9.70e-0775







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:13670441..13670463,%2B&oldid=3007199"