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FFCP PHASE1:Mm9::chr1:52176378..52176401,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20846|HGNC=|MCL_coexpression_id=18|UniProt=|association_with_transcript=44bp_to_uc007ayb.1_5end|description=CAGE_peak_3_at_Stat1_5end|id=chr1:52176378..52176401,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!2.71e-13!88;UBERON:0002193!1.43e-10!48;UBERON:0002390!6.81e-10!45;UBERON:0003061!6.81e-10!45;UBERON:0004177!2.07e-09!29;UBERON:0000926!1.50e-08!193;UBERON:0004120!1.50e-08!193;UBERON:0006603!1.50e-08!193;UBERON:0003408!1.44e-07!24;UBERON:0006562!2.36e-07!24;UBERON:0001557!2.36e-07!24;UBERON:0001042!2.36e-07!24;UBERON:0008814!2.36e-07!24;UBERON:0009145!2.36e-07!24;UBERON:0002370!3.24e-07!23;UBERON:0000974!3.24e-07!23;UBERON:0004807!3.24e-07!23;UBERON:0005058!3.24e-07!23;UBERON:0003351!3.24e-07!23;UBERON:0009113!3.24e-07!23;UBERON:0003295!3.24e-07!23;UBERON:0009722!3.24e-07!23;UBERON:0005562!3.24e-07!23;UBERON:0007690!3.24e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.17e-12,87;UBERON:0000926,3.40e-12,120;UBERON:0004120,3.40e-12,120;UBERON:0006603,3.40e-12,120;UBERON:0002193,7.48e-11,48;UBERON:0002405,7.48e-11,48;UBERON:0002390,3.73e-10,45;UBERON:0003061,3.73e-10,45;UBERON:0000077,5.59e-10,35;UBERON:0004177,1.17e-09,29;UBERON:0005057,1.17e-09,29;UBERON:0003408,9.27e-08,24;UBERON:0006562,1.54e-07,24;UBERON:0001557,1.54e-07,24;UBERON:0001042,1.54e-07,24;UBERON:0008814,1.54e-07,24;UBERON:0009145,1.54e-07,24;UBERON:0002370,2.14e-07,23;UBERON:0000974,2.14e-07,23;UBERON:0004807,2.14e-07,23;UBERON:0005058,2.14e-07,23;UBERON:0003351,2.14e-07,23;UBERON:0009113,2.14e-07,23;UBERON:0003295,2.14e-07,23;UBERON:0009722,2.14e-07,23;UBERON:0005562,2.14e-07,23;UBERON:0007690,2.14e-07,23|phase1_expression=1.92178616525753,0,0.909998478779072,1.81478526784098,0.500895729946347,1.00727563147134,0.700837921786577,11.3628524628587,2.53419699873,3.5109678948299,0.34243593645101,0.558405112967355,13.5248576645653,9.26656265641372,6.32908547449759,9.31386229993199,2.09868563438444,42.5873923233621,44.0137331874421,22.4926515452956,1.87095238332354,1.78723712161594,0.522399578277871,3.51983330145495,2.06468352960453,1.14846392823004,0.86152399231815,1.50829862880122,1.90023419456374,5.04060259519861,0.886922042621219,0,0,0,0.577703239502549,0.664938581433969,0.612508068787107,3.76678467663217,2.3440060335714,3.66466620781659,2.94115744015507,1.36609096991689,2.42755176515577,5.91715044485213,3.04130793658544,2.0190142737785,3.12956537739216,0,0.659058548203415,1.1665793944457,2.65974201088189,0,19.7983475148129,9.42970784614748,15.1242209614109,11.0621557495457,6.5902691185914,10.3134418455488,0.202316460859598,0,0.633831403506179,0.338844532069132,3.55717918444456,0.449949858640699,0.988866362566974,2.8419204597844,0,0.384218305321555,0.103689612308478,0.540023753326763,0,0.285650984403804,0.220868540951614,0.122490799214954,0.191690942036473,0,1.10115880999389,1.27687338085188,0.921639199537461,0.263772575460388,0.365950574409639,0,0.558365998002762,0,1.06958773443767,1.47314292736834,1.85083185038834,0.372798891650601,4.61929779332423,7.55715601067855,6.95674772884027,2.58127163094416,0,0,0,0.896053774194671,3.23022166303029,6.64678258054425,5.19572009205738,4.24007489412408,1.54927761754349,7.69958864485907,10.1922095882658,14.2213340630666,0,0,0,3.08296475241462,44.0194402200192,6.53145411885229,0.693941307064543,0.304465478312141,1.15307748628029,4.82312449768392,6.93773372100658,8.16832843642891,2.71914464507811,27.6184771717031,6.19227386364912,2.10296904931632,3.97514733228708,6.78825354389311,1.86391761218122,1.46390398505774,1.04723353406728,6.64188343542338,0.838705871541442,1.79970819298022,1.77898317902291,1.04853447583376,1.83000241127451,0.628271760564322,0.521472960576829,1.27857728665165,0.83115217823824,1.78465389374533,2.95334155165917,5.72272064806428,2.0217820674694,2.10441855886474,0.390361328888111,0.919608417733892,0.540186389416048,0.90422890701429,1.49680298132921,0.768682321709099,0.843315521037559,2.06962696591213,0.215567992932842,1.70195472151037,1.05570674498369,1.31517439456545,1.11218899690239,0.696504333044333,1.23469281844766,0.796137067273973,4.21327912387941,1.80143534980301,1.70498099637356,1.44988040774851,1.40715635988658,0.720248245844059,0.710234206755631,1.77087808572663,0.925602677324269,1.39520366850245,3.48755421819505,7.82327793860036,4.60767579757745,4.26835406605648,3.24275238183423,4.9707995724613,13.173006917463,5.77087600669599,0.841159794256509,1.54356918568927,2.97376904685418,2.90895623329899,0.426576501070468,0.232236671860439,0.257734922644187,0.605050573870028,1.33426826306922,1.90225626112559,1.89811624617805,1.31759163779209,3.01602250560323,3.58121649674071,1.16978452271472,6.29173586057955,3.45820879799511,1.1948476395262,0,0.799739588268102,0,1.22190796707189,2.71533482034676,3.64706263429657,2.59269802209455,3.39503340353085,4.08196692387575,2.46794327843601,1.77871576252289,0.667380422864376,0.786235980452812,0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|EntrezGene=20846
|HGNC=
|MCL_coexpression_id=18
|UniProt=
|association_with_transcript=44bp_to_uc007ayb.1_5end
|description=CAGE_peak_3_at_Stat1_5end
|id=chr1:52176378..52176401,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003081!2.71e-13!88;UBERON:0002193!1.43e-10!48;UBERON:0002390!6.81e-10!45;UBERON:0003061!6.81e-10!45;UBERON:0004177!2.07e-09!29;UBERON:0000926!1.50e-08!193;UBERON:0004120!1.50e-08!193;UBERON:0006603!1.50e-08!193;UBERON:0003408!1.44e-07!24;UBERON:0006562!2.36e-07!24;UBERON:0001557!2.36e-07!24;UBERON:0001042!2.36e-07!24;UBERON:0008814!2.36e-07!24;UBERON:0009145!2.36e-07!24;UBERON:0002370!3.24e-07!23;UBERON:0000974!3.24e-07!23;UBERON:0004807!3.24e-07!23;UBERON:0005058!3.24e-07!23;UBERON:0003351!3.24e-07!23;UBERON:0009113!3.24e-07!23;UBERON:0003295!3.24e-07!23;UBERON:0009722!3.24e-07!23;UBERON:0005562!3.24e-07!23;UBERON:0007690!3.24e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.17e-12,87;UBERON:0000926,3.40e-12,120;UBERON:0004120,3.40e-12,120;UBERON:0006603,3.40e-12,120;UBERON:0002193,7.48e-11,48;UBERON:0002405,7.48e-11,48;UBERON:0002390,3.73e-10,45;UBERON:0003061,3.73e-10,45;UBERON:0000077,5.59e-10,35;UBERON:0004177,1.17e-09,29;UBERON:0005057,1.17e-09,29;UBERON:0003408,9.27e-08,24;UBERON:0006562,1.54e-07,24;UBERON:0001557,1.54e-07,24;UBERON:0001042,1.54e-07,24;UBERON:0008814,1.54e-07,24;UBERON:0009145,1.54e-07,24;UBERON:0002370,2.14e-07,23;UBERON:0000974,2.14e-07,23;UBERON:0004807,2.14e-07,23;UBERON:0005058,2.14e-07,23;UBERON:0003351,2.14e-07,23;UBERON:0009113,2.14e-07,23;UBERON:0003295,2.14e-07,23;UBERON:0009722,2.14e-07,23;UBERON:0005562,2.14e-07,23;UBERON:0007690,2.14e-07,23
|phase1_expression=1.92178616525753,0,0.909998478779072,1.81478526784098,0.500895729946347,1.00727563147134,0.700837921786577,11.3628524628587,2.53419699873,3.5109678948299,0.34243593645101,0.558405112967355,13.5248576645653,9.26656265641372,6.32908547449759,9.31386229993199,2.09868563438444,42.5873923233621,44.0137331874421,22.4926515452956,1.87095238332354,1.78723712161594,0.522399578277871,3.51983330145495,2.06468352960453,1.14846392823004,0.86152399231815,1.50829862880122,1.90023419456374,5.04060259519861,0.886922042621219,0,0,0,0.577703239502549,0.664938581433969,0.612508068787107,3.76678467663217,2.3440060335714,3.66466620781659,2.94115744015507,1.36609096991689,2.42755176515577,5.91715044485213,3.04130793658544,2.0190142737785,3.12956537739216,0,0.659058548203415,1.1665793944457,2.65974201088189,0,19.7983475148129,9.42970784614748,15.1242209614109,11.0621557495457,6.5902691185914,10.3134418455488,0.202316460859598,0,0.633831403506179,0.338844532069132,3.55717918444456,0.449949858640699,0.988866362566974,2.8419204597844,0,0.384218305321555,0.103689612308478,0.540023753326763,0,0.285650984403804,0.220868540951614,0.122490799214954,0.191690942036473,0,1.10115880999389,1.27687338085188,0.921639199537461,0.263772575460388,0.365950574409639,0,0.558365998002762,0,1.06958773443767,1.47314292736834,1.85083185038834,0.372798891650601,4.61929779332423,7.55715601067855,6.95674772884027,2.58127163094416,0,0,0,0.896053774194671,3.23022166303029,6.64678258054425,5.19572009205738,4.24007489412408,1.54927761754349,7.69958864485907,10.1922095882658,14.2213340630666,0,0,0,3.08296475241462,44.0194402200192,6.53145411885229,0.693941307064543,0.304465478312141,1.15307748628029,4.82312449768392,6.93773372100658,8.16832843642891,2.71914464507811,27.6184771717031,6.19227386364912,2.10296904931632,3.97514733228708,6.78825354389311,1.86391761218122,1.46390398505774,1.04723353406728,6.64188343542338,0.838705871541442,1.79970819298022,1.77898317902291,1.04853447583376,1.83000241127451,0.628271760564322,0.521472960576829,1.27857728665165,0.83115217823824,1.78465389374533,2.95334155165917,5.72272064806428,2.0217820674694,2.10441855886474,0.390361328888111,0.919608417733892,0.540186389416048,0.90422890701429,1.49680298132921,0.768682321709099,0.843315521037559,2.06962696591213,0.215567992932842,1.70195472151037,1.05570674498369,1.31517439456545,1.11218899690239,0.696504333044333,1.23469281844766,0.796137067273973,4.21327912387941,1.80143534980301,1.70498099637356,1.44988040774851,1.40715635988658,0.720248245844059,0.710234206755631,1.77087808572663,0.925602677324269,1.39520366850245,3.48755421819505,7.82327793860036,4.60767579757745,4.26835406605648,3.24275238183423,4.9707995724613,13.173006917463,5.77087600669599,0.841159794256509,1.54356918568927,2.97376904685418,2.90895623329899,0.426576501070468,0.232236671860439,0.257734922644187,0.605050573870028,1.33426826306922,1.90225626112559,1.89811624617805,1.31759163779209,3.01602250560323,3.58121649674071,1.16978452271472,6.29173586057955,3.45820879799511,1.1948476395262,0,0.799739588268102,0,1.22190796707189,2.71533482034676,3.64706263429657,2.59269802209455,3.39503340353085,4.08196692387575,2.46794327843601,1.77871576252289,0.667380422864376,0.786235980452812,0.674586337154561,0.405720242777006,0.241177159752417,1.2731292589071,3.45235364940973,1.62135226775035,2.74561413188081,2.87536413054709,6.69853705803306,2.49630138491648,2.52578877947112,1.97337154874103,1.4473305640901,10.5309318394965,0.947457058852424,0.814824882210129,0.509235257325564,0.469380496577004,1.50755631697634,5.71304738126433,5.85400943573396,3.78324345854858,8.19419351700467,3.18909537314974,5.73521601505083,5.69860440157455,3.47157740595628,6.03165135757089,17.4049818821987,2.95058563811422,8.00216564283724,2.72936002979246,0.937693492737625,1.63934945376675,3.28212205365685,0.631016438832513,0.390438744296638,0.861693590931196,0.955875191810208,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,1.60660658210904,2.55492153374884,1.06839362200353,3.09485222771795,3.29940245945071,1.32745138339963,1.21390318077491,0,0.943025398779491,1.47650946440386,3.07435147943927,4.13485269069154,2.18120237686503,2.13898427030833,1.58018378967908,1.05418608574999,2.06271086496374,2.04263763452273,0.900305470156551,0.646793418913773,0.857348140126369,0.709360934569094,0.713475270408282,0.987294123612726,1.8267896946876,6.10146440965647,2.1183207086382,1.7642271844397,3.79238381765404,5.32832608096488,3.61877549568935,2.50681922406587,2.1338316966858,2.62332752966866,1.48340241608408,10.0813819670733,1.857481811669,7.9633646768976,4.89757988212197,9.15851325730869,9.15112692826091,4.75939603982795,5.73800954526998,4.83699908315483,2.86401185404534,0.474503990371703,1.42323626988794,0.432021363287205,1.04544148007234,2.18362563746178,1.21377911746339,2.31429676030941,2.09404753587224,1.68499465279331,5.59205381778233,1.12738587736838,0.448549638131936,0.496375471371293,0.388902376688095,1.6790777052105,2.87225413334323,3.75543163666413,1.3020438484395,2.62148361064277,1.69108884578204,2.30424005006292,7.58426689507628,3.64905387522296,4.10843828659309,6.10627867995637,3.93858730468459,4.17230845040656,4.44723163223885,4.72606486958647,4.64445669761479,6.02033772574499,5.34378781225255,6.62713589030316,5.8689223400601,6.31135271780472,3.40095575422817,0.665957860122194,0.269141569828427,0.335769232728157,3.47741269257943,5.81815673898664,6.77661009788881,1.50057865355346,2.50786052017682,0,0.460325236507177,0,0.515559547031063,1.37016503954128,0.755393897389701,0,0,0,0.51776031175182,0.207574695168353,0,0.512200817262403,1.21553358534147,0.209613162627982,1.65459157605013,3.55594764482584,1.85431551515005,1.60459604795908,2.02157769411038,3.54871019846336,4.14977951049368,2.24739617927718,2.81710670581425,3.0440798546475,1.90517476513229,2.89710814862139,3.08654752741928,1.23625770240992,3.97437084362873,3.08582327146874,2.48466128623072,2.86123427936785,3.0522747492789,2.1645157495526,2.11536519729191,3.84148743032822,2.89376682581627,3.12349461845482,5.05028044491965,2.72860541685601,2.56111654176465,3.27384834535751,2.16911577660352,1.92906610981141,1.74867404556562,3.74290573512653,4.08255002691767,3.25190164517034,5.51478547798789,5.79669589051054
|short_description=p3@Stat1
}}

Revision as of 20:29, 13 September 2013

Short description:p3@Stat1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Stat1_5end
Coexpression cluster:MCL_coexpression_mm9:18
Association with transcript: 44bp_to_uc007ayb.1_5end
EntrezGene:Stat1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Stat1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E911.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.52
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.27
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.31
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A242.59
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A444.01
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A622.49
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C15.04
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.92
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.04
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A219.80
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A115.12
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.59
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D94.62
Mouse Schwann, donor2.CNhs12573.11746-123F97.56
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.08
accessory axillary lymph node, adult.CNhs10475.1063-29H944.02
adrenal gland, adult.CNhs10508.49-24D76.53
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F54.82
adrenal gland, neonate N00.CNhs11191.1311-23C16.94
adrenal gland, neonate N25.CNhs11223.1377-27I38.17
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H127.62
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H76.64
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.78
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.72
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E37.82
heart, neonate N03.CNhs11221.1349-25I24.61
heart, neonate N10.CNhs11118.749-24G14.27
heart, neonate N16.CNhs11209.782-15G13.24
heart, neonate N20.CNhs11127.821-26I64.97
heart, neonate N25.CNhs11196.1351-25D313.17
heart, neonate N30.CNhs11202.1390-42D25.77
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E33.46
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G73.65
kidney, neonate N10.CNhs11206.758-6D52.59
kidney, neonate N20.CNhs11113.832-19I13.40
kidney, neonate N25.CNhs11122.1353-25F34.08
kidney, neonate N30.CNhs11203.1385-42H12.47
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H26.70
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B110.53
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I65.71
lung, neonate N00.CNhs11224.640-42C65.85
lung, neonate N06.CNhs11212.683-20E53.78
lung, neonate N07.CNhs11111.715-19A38.19
lung, neonate N10.CNhs11219.750-23E63.19
lung, neonate N20.CNhs11109.822-18A45.74
lung, neonate N25.CNhs11119.1359-25C75.70
lung, neonate N30.CNhs11133.1394-42H23.47
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A117.40
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H28.00
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I43.09
oviduct, adult pregnant day01.CNhs10500.988-6G63.30
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I76.10
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G45.33
skin, neonate N03.CNhs11215.662-22H33.62
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G210.08
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F27.96
spleen, neonate N10.CNhs11116.752-24D14.90
spleen, neonate N20.CNhs11112.824-19H19.16
spleen, neonate N25.CNhs11099.1354-25G39.15
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.84
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A92.31
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B73.76
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D92.62
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B57.58
thymus, embryo E14.CNhs11041.402-44I43.65
thymus, embryo E15.CNhs11005.430-45I24.11
thymus, embryo E16.CNhs11002.456-26C56.11
thymus, embryo E17.CNhs10581.478-18C13.94
thymus, embryo E18.CNhs10595.1273-19G44.17
thymus, neonate N02.CNhs11181.1541-43F84.45
thymus, neonate N03.CNhs11137.2104-43C74.73
thymus, neonate N06.CNhs11197.681-26C44.64
thymus, neonate N07.CNhs11211.713-19D36.02
thymus, neonate N10.CNhs11194.748-24E45.34
thymus, neonate N20.CNhs11186.820-7A26.63
thymus, neonate N25.CNhs11125.1362-25G75.87
thymus, neonate N30.CNhs11132.1393-42G26.31
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E43.48
uterus, adult pregnant day19.CNhs10497.590-15F55.82
uterus, adult.CNhs10509.92-27E56.78
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C24.08
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D15.51
whole body, neonate N10.CNhs10518.761-6B45.80





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
lateral plate mesoderm1.17e-1287
mesoderm3.40e-12120
mesoderm-derived structure3.40e-12120
presumptive mesoderm3.40e-12120
hemolymphoid system7.48e-1148
immune system7.48e-1148
hematopoietic system3.73e-1045
blood island3.73e-1045
mixed endoderm/mesoderm-derived structure5.59e-1035
hemopoietic organ1.17e-0929
immune organ1.17e-0929
gland of gut9.27e-0824
pharynx1.54e-0724
upper respiratory tract1.54e-0724
chordate pharynx1.54e-0724
pharyngeal arch system1.54e-0724
pharyngeal region of foregut1.54e-0724
thymus2.14e-0723
neck2.14e-0723
respiratory system epithelium2.14e-0723
hemolymphoid system gland2.14e-0723
pharyngeal epithelium2.14e-0723
thymic region2.14e-0723
pharyngeal gland2.14e-0723
entire pharyngeal arch endoderm2.14e-0723
thymus primordium2.14e-0723
early pharyngeal endoderm2.14e-0723







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