FFCP PHASE1:Mm9::chr19:25580110..25580163,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=50796|HGNC=|MCL_coexpression_id=77|UniProt=Q6Y951|association_with_transcript=2bp_to_ENSMUST00000025755_5end|description=CAGE_peak_1_at_Dmrt1_5end|id=chr19:25580110..25580163,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000473!6.44e-36!14;UBERON:0003135!2.26e-33!15;UBERON:0000991!3.18e-32!18;UBERON:0005564!3.18e-32!18;UBERON:0003101!3.83e-31!16;UBERON:0000079!3.83e-31!16;UBERON:0004176!3.54e-29!17;UBERON:0009196!3.54e-29!17;UBERON:0009117!3.54e-29!17;UBERON:0003133!1.56e-23!24;UBERON:0005156!1.58e-21!26;UBERON:0000990!1.58e-21!26;UBERON:0002323!2.30e-14!37;UBERON:0004458!2.30e-14!37;UBERON:0003886!6.41e-14!38;UBERON:0002553!1.70e-13!39;UBERON:0000464!1.99e-08!57|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.70e-54,14;UBERON:0003135,2.17e-50,15;UBERON:0000991,1.25e-49,18;UBERON:0005564,1.25e-49,18;UBERON:0003101,3.50e-47,16;UBERON:0000079,3.50e-47,16;UBERON:0004176,2.37e-44,17;UBERON:0009196,2.37e-44,17;UBERON:0009117,2.37e-44,17;UBERON:0003133,5.84e-37,24;UBERON:0005156,4.93e-34,26;UBERON:0000990,4.93e-34,26;UBERON:0002323,1.42e-23,37;UBERON:0004458,1.42e-23,37;UBERON:0003886,6.35e-23,38;UBERON:0002553,2.64e-22,39;UBERON:0000926,1.50e-07,120;UBERON:0004120,1.50e-07,120;UBERON:0006603,1.50e-07,120|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,1.52865319276416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,4.97585667046233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0.596869416123452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07323644815771,15.8487538806618,14.2294301793104,14.1949367491155,13.0451421712508,18.0783054275133,17.0167996036343,38.0196803744334,35.8618957935931,13.0455425246043,7.4887801627045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270036248348,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p1@Dmrt1}} | ||
|EntrezGene=50796 | |||
|HGNC= | |||
|MCL_coexpression_id=77 | |||
|UniProt=Q6Y951 | |||
|association_with_transcript=2bp_to_ENSMUST00000025755_5end | |||
|description=CAGE_peak_1_at_Dmrt1_5end | |||
|id=chr19:25580110..25580163,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!6.44e-36!14;UBERON:0003135!2.26e-33!15;UBERON:0000991!3.18e-32!18;UBERON:0005564!3.18e-32!18;UBERON:0003101!3.83e-31!16;UBERON:0000079!3.83e-31!16;UBERON:0004176!3.54e-29!17;UBERON:0009196!3.54e-29!17;UBERON:0009117!3.54e-29!17;UBERON:0003133!1.56e-23!24;UBERON:0005156!1.58e-21!26;UBERON:0000990!1.58e-21!26;UBERON:0002323!2.30e-14!37;UBERON:0004458!2.30e-14!37;UBERON:0003886!6.41e-14!38;UBERON:0002553!1.70e-13!39;UBERON:0000464!1.99e-08!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.70e-54,14;UBERON:0003135,2.17e-50,15;UBERON:0000991,1.25e-49,18;UBERON:0005564,1.25e-49,18;UBERON:0003101,3.50e-47,16;UBERON:0000079,3.50e-47,16;UBERON:0004176,2.37e-44,17;UBERON:0009196,2.37e-44,17;UBERON:0009117,2.37e-44,17;UBERON:0003133,5.84e-37,24;UBERON:0005156,4.93e-34,26;UBERON:0000990,4.93e-34,26;UBERON:0002323,1.42e-23,37;UBERON:0004458,1.42e-23,37;UBERON:0003886,6.35e-23,38;UBERON:0002553,2.64e-22,39;UBERON:0000926,1.50e-07,120;UBERON:0004120,1.50e-07,120;UBERON:0006603,1.50e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,1.52865319276416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,4.97585667046233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0.596869416123452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07323644815771,15.8487538806618,14.2294301793104,14.1949367491155,13.0451421712508,18.0783054275133,17.0167996036343,38.0196803744334,35.8618957935931,13.0455425246043,7.4887801627045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270036248348,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p1@Dmrt1 | |||
}} |
Revision as of 17:16, 13 September 2013
Short description: | p1@Dmrt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dmrt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:77 |
Association with transcript: | 2bp_to_ENSMUST00000025755_5end |
EntrezGene: | Dmrt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 4.70e-54 | 14 |
male reproductive organ | 2.17e-50 | 15 |
gonad | 1.25e-49 | 18 |
gonad primordium | 1.25e-49 | 18 |
male organism | 3.50e-47 | 16 |
male reproductive system | 3.50e-47 | 16 |
external genitalia | 2.37e-44 | 17 |
indifferent external genitalia | 2.37e-44 | 17 |
indifferent gonad | 2.37e-44 | 17 |
reproductive organ | 5.84e-37 | 24 |
reproductive structure | 4.93e-34 | 26 |
reproductive system | 4.93e-34 | 26 |
body cavity | 1.42e-23 | 37 |
body cavity or lining | 1.42e-23 | 37 |
body cavity precursor | 6.35e-23 | 38 |
anatomical cavity | 2.64e-22 | 39 |
mesoderm | 1.50e-07 | 120 |
mesoderm-derived structure | 1.50e-07 | 120 |
presumptive mesoderm | 1.50e-07 | 120 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.