FFCP PHASE1:Mm9::chr6:129187043..129187060,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1285|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:129187043..129187060,-|id=chr6:129187043..129187060,-|ontology_enrichment_celltype=CL:0000838!4.01e-14!12;CL:0000084!7.03e-13!11;CL:0000827!7.03e-13!11;CL:0000542!9.24e-13!13;CL:0000051!9.24e-13!13;CL:0002031!1.20e-11!25;CL:0000738!8.99e-11!17;CL:0002087!8.99e-11!17;CL:0000791!2.72e-10!9;CL:0000789!2.72e-10!9;CL:0002420!2.72e-10!9;CL:0002419!2.72e-10!9;CL:0000790!2.72e-10!9;CL:0000988!2.76e-10!32;CL:0002032!2.76e-10!32;CL:0000037!2.76e-10!32;CL:0000566!2.76e-10!32;CL:0000837!2.76e-10!32;CL:0000893!3.47e-09!6;CL:0002489!3.47e-09!6;CL:0000898!3.47e-09!6;CL:0000809!3.47e-09!6;CL:0000810!3.47e-09!6;CL:0000895!3.47e-09!6;CL:0000808!3.47e-09!6;CL:0000894!3.47e-09!6;CL:0000806!3.47e-09!6;CL:0000807!3.47e-09!6;CL:0000805!3.47e-09!6;CL:0002425!3.47e-09!6;CL:0002436!3.47e-09!6;CL:0002427!3.47e-09!6;CL:0002428!3.47e-09!6;CL:0002429!3.47e-09!6;CL:0002433!3.47e-09!6;CL:0002431!3.47e-09!6;CL:0002432!3.47e-09!6;CL:0000624!5.50e-09!8;CL:0002320!3.66e-07!46;CL:0000134!3.66e-07!46|ontology_enrichment_celltype_v019_2=CL:0000838,9.17e-33,12;CL:0000542,4.04e-30,13;CL:0000051,4.04e-30,13;CL:0000084,3.32e-29,11;CL:0000827,3.32e-29,11;CL:0000738,3.27e-27,17;CL:0002087,3.27e-27,17;CL:0002031,9.47e-25,25;CL:0000791,6.96e-22,9;CL:0000789,6.96e-22,9;CL:0002420,6.96e-22,9;CL:0002419,6.96e-22,9;CL:0000790,6.96e-22,9;CL:0000988,7.86e-19,32;CL:0002032,7.86e-19,32;CL:0000037,7.86e-19,32;CL:0000837,7.86e-19,32;CL:0000624,3.03e-18,8;CL:0000893,3.91e-17,6;CL:0002489,3.91e-17,6;CL:0000898,3.91e-17,6;CL:0000809,3.91e-17,6;CL:0000810,3.91e-17,6;CL:0000895,3.91e-17,6;CL:0000808,3.91e-17,6;CL:0000894,3.91e-17,6;CL:0000806,3.91e-17,6;CL:0000807,3.91e-17,6;CL:0000805,3.91e-17,6;CL:0002425,3.91e-17,6;CL:0002436,3.91e-17,6;CL:0002427,3.91e-17,6;CL:0002428,3.91e-17,6;CL:0002429,3.91e-17,6;CL:0002433,3.91e-17,6;CL:0002431,3.91e-17,6;CL:0002432,3.91e-17,6;CL:0002320,2.18e-12,46;CL:0000134,2.18e-12,46;CL:0000219,3.34e-10,54;CL:0000723,4.19e-07,91;CL:0000048,4.19e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.38e-18!48;UBERON:0004177!1.66e-18!29;UBERON:0002390!3.52e-17!45;UBERON:0003061!3.52e-17!45;UBERON:0002370!3.12e-14!23;UBERON:0000974!3.12e-14!23;UBERON:0004807!3.12e-14!23;UBERON:0005058!3.12e-14!23;UBERON:0003351!3.12e-14!23;UBERON:0009113!3.12e-14!23;UBERON:0003295!3.12e-14!23;UBERON:0009722!3.12e-14!23;UBERON:0005562!3.12e-14!23;UBERON:0007690!3.12e-14!23;UBERON:0006562!2.09e-13!24;UBERON:0003408!2.09e-13!24;UBERON:0001557!2.09e-13!24;UBERON:0001042!2.09e-13!24;UBERON:0008814!2.09e-13!24;UBERON:0009145!2.09e-13!24;UBERON:0002405!3.01e-12!70;UBERON:0000072!2.62e-11!27;UBERON:0000065!4.18e-10!41;UBERON:0005057!5.22e-10!51;UBERON:0001004!1.04e-09!42;UBERON:0000063!1.72e-08!35;UBERON:0003081!5.48e-08!88;UBERON:0002384!3.66e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.94e-13,48;UBERON:0002405,1.94e-13,48;UBERON:0002384,2.18e-12,46;UBERON:0002390,3.09e-12,45;UBERON:0003061,3.09e-12,45;UBERON:0004177,5.25e-12,29;UBERON:0005057,5.25e-12,29;UBERON:0000077,1.15e-09,35;UBERON:0002370,1.00e-07,23;UBERON:0000974,1.00e-07,23;UBERON:0004807,1.00e-07,23;UBERON:0005058,1.00e-07,23;UBERON:0003351,1.00e-07,23;UBERON:0009113,1.00e-07,23;UBERON:0003295,1.00e-07,23;UBERON:0009722,1.00e-07,23;UBERON:0005562,1.00e-07,23;UBERON:0007690,1.00e-07,23;UBERON:0006562,2.29e-07,24;UBERON:0003408,2.29e-07,24;UBERON:0001557,2.29e-07,24;UBERON:0001042,2.29e-07,24;UBERON:0008814,2.29e-07,24;UBERON:0009145,2.29e-07,24|phase1_expression=0,0,0,0,0,0,0,3.87369970324729,6.335492496825,5.38348410540585,2.05461561870606,2.31339261086476,3.0816131387617,0.961624426608971,0,0.607425802169478,0,1.10411757875383,1.37114433605739,0.84877930359606,0,3.17731043842833,2.35079810225042,0.47997726838022,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0.204169356262369,1.67412652294763,0,1.57057123192139,1.17646297606203,0.683045484958446,1.94204141212461,0,0,0,0,0,0,0,0,0,2.01339127269284,0,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0.280888840263504,0,0.519572009205738,0,0,0,0,0,0,0,0,0.11418387971906,6.47344709117929,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,0.599075622529601,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0.476087281772027,0.195133647857799,0,0.221464689648775,0,0.491589944147214,0,0.144649058581512,1.50791283939272,0,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87957968877638,0.206386867963223,0,0.941842285023455,1.50363650493128,2.0590035588587,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0.102710957164827,0.51968329191118,0.358053391334963,0.596044064343795,0.600977247599844,0.295379054349154,0,0.533447646584999,0.201652370273681,0.584747284438515,1.34696578296461,1.63627663054197,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr6:129187043..129187060,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1285 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:129187043..129187060,- | |||
|id=chr6:129187043..129187060,- | |||
|ontology_enrichment_celltype=CL:0000838!4.01e-14!12;CL:0000084!7.03e-13!11;CL:0000827!7.03e-13!11;CL:0000542!9.24e-13!13;CL:0000051!9.24e-13!13;CL:0002031!1.20e-11!25;CL:0000738!8.99e-11!17;CL:0002087!8.99e-11!17;CL:0000791!2.72e-10!9;CL:0000789!2.72e-10!9;CL:0002420!2.72e-10!9;CL:0002419!2.72e-10!9;CL:0000790!2.72e-10!9;CL:0000988!2.76e-10!32;CL:0002032!2.76e-10!32;CL:0000037!2.76e-10!32;CL:0000566!2.76e-10!32;CL:0000837!2.76e-10!32;CL:0000893!3.47e-09!6;CL:0002489!3.47e-09!6;CL:0000898!3.47e-09!6;CL:0000809!3.47e-09!6;CL:0000810!3.47e-09!6;CL:0000895!3.47e-09!6;CL:0000808!3.47e-09!6;CL:0000894!3.47e-09!6;CL:0000806!3.47e-09!6;CL:0000807!3.47e-09!6;CL:0000805!3.47e-09!6;CL:0002425!3.47e-09!6;CL:0002436!3.47e-09!6;CL:0002427!3.47e-09!6;CL:0002428!3.47e-09!6;CL:0002429!3.47e-09!6;CL:0002433!3.47e-09!6;CL:0002431!3.47e-09!6;CL:0002432!3.47e-09!6;CL:0000624!5.50e-09!8;CL:0002320!3.66e-07!46;CL:0000134!3.66e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,9.17e-33,12;CL:0000542,4.04e-30,13;CL:0000051,4.04e-30,13;CL:0000084,3.32e-29,11;CL:0000827,3.32e-29,11;CL:0000738,3.27e-27,17;CL:0002087,3.27e-27,17;CL:0002031,9.47e-25,25;CL:0000791,6.96e-22,9;CL:0000789,6.96e-22,9;CL:0002420,6.96e-22,9;CL:0002419,6.96e-22,9;CL:0000790,6.96e-22,9;CL:0000988,7.86e-19,32;CL:0002032,7.86e-19,32;CL:0000037,7.86e-19,32;CL:0000837,7.86e-19,32;CL:0000624,3.03e-18,8;CL:0000893,3.91e-17,6;CL:0002489,3.91e-17,6;CL:0000898,3.91e-17,6;CL:0000809,3.91e-17,6;CL:0000810,3.91e-17,6;CL:0000895,3.91e-17,6;CL:0000808,3.91e-17,6;CL:0000894,3.91e-17,6;CL:0000806,3.91e-17,6;CL:0000807,3.91e-17,6;CL:0000805,3.91e-17,6;CL:0002425,3.91e-17,6;CL:0002436,3.91e-17,6;CL:0002427,3.91e-17,6;CL:0002428,3.91e-17,6;CL:0002429,3.91e-17,6;CL:0002433,3.91e-17,6;CL:0002431,3.91e-17,6;CL:0002432,3.91e-17,6;CL:0002320,2.18e-12,46;CL:0000134,2.18e-12,46;CL:0000219,3.34e-10,54;CL:0000723,4.19e-07,91;CL:0000048,4.19e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.38e-18!48;UBERON:0004177!1.66e-18!29;UBERON:0002390!3.52e-17!45;UBERON:0003061!3.52e-17!45;UBERON:0002370!3.12e-14!23;UBERON:0000974!3.12e-14!23;UBERON:0004807!3.12e-14!23;UBERON:0005058!3.12e-14!23;UBERON:0003351!3.12e-14!23;UBERON:0009113!3.12e-14!23;UBERON:0003295!3.12e-14!23;UBERON:0009722!3.12e-14!23;UBERON:0005562!3.12e-14!23;UBERON:0007690!3.12e-14!23;UBERON:0006562!2.09e-13!24;UBERON:0003408!2.09e-13!24;UBERON:0001557!2.09e-13!24;UBERON:0001042!2.09e-13!24;UBERON:0008814!2.09e-13!24;UBERON:0009145!2.09e-13!24;UBERON:0002405!3.01e-12!70;UBERON:0000072!2.62e-11!27;UBERON:0000065!4.18e-10!41;UBERON:0005057!5.22e-10!51;UBERON:0001004!1.04e-09!42;UBERON:0000063!1.72e-08!35;UBERON:0003081!5.48e-08!88;UBERON:0002384!3.66e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.94e-13,48;UBERON:0002405,1.94e-13,48;UBERON:0002384,2.18e-12,46;UBERON:0002390,3.09e-12,45;UBERON:0003061,3.09e-12,45;UBERON:0004177,5.25e-12,29;UBERON:0005057,5.25e-12,29;UBERON:0000077,1.15e-09,35;UBERON:0002370,1.00e-07,23;UBERON:0000974,1.00e-07,23;UBERON:0004807,1.00e-07,23;UBERON:0005058,1.00e-07,23;UBERON:0003351,1.00e-07,23;UBERON:0009113,1.00e-07,23;UBERON:0003295,1.00e-07,23;UBERON:0009722,1.00e-07,23;UBERON:0005562,1.00e-07,23;UBERON:0007690,1.00e-07,23;UBERON:0006562,2.29e-07,24;UBERON:0003408,2.29e-07,24;UBERON:0001557,2.29e-07,24;UBERON:0001042,2.29e-07,24;UBERON:0008814,2.29e-07,24;UBERON:0009145,2.29e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,3.87369970324729,6.335492496825,5.38348410540585,2.05461561870606,2.31339261086476,3.0816131387617,0.961624426608971,0,0.607425802169478,0,1.10411757875383,1.37114433605739,0.84877930359606,0,3.17731043842833,2.35079810225042,0.47997726838022,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0.204169356262369,1.67412652294763,0,1.57057123192139,1.17646297606203,0.683045484958446,1.94204141212461,0,0,0,0,0,0,0,0,0,2.01339127269284,0,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0.280888840263504,0,0.519572009205738,0,0,0,0,0,0,0,0,0.11418387971906,6.47344709117929,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,0.599075622529601,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0.476087281772027,0.195133647857799,0,0.221464689648775,0,0.491589944147214,0,0.144649058581512,1.50791283939272,0,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87957968877638,0.206386867963223,0,0.941842285023455,1.50363650493128,2.0590035588587,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0.102710957164827,0.51968329191118,0.358053391334963,0.596044064343795,0.600977247599844,0.295379054349154,0,0.533447646584999,0.201652370273681,0.584747284438515,1.34696578296461,1.63627663054197,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr6:129187043..129187060,- | |||
}} |
Revision as of 09:04, 14 September 2013
Short description: | p@chr6:129187043..129187060, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:129187043..129187060, - |
Coexpression cluster: | MCL_coexpression_mm9:1285 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.94e-13 | 48 |
immune system | 1.94e-13 | 48 |
connective tissue | 2.18e-12 | 46 |
hematopoietic system | 3.09e-12 | 45 |
blood island | 3.09e-12 | 45 |
hemopoietic organ | 5.25e-12 | 29 |
immune organ | 5.25e-12 | 29 |
mixed endoderm/mesoderm-derived structure | 1.15e-09 | 35 |
thymus | 1.00e-07 | 23 |
neck | 1.00e-07 | 23 |
respiratory system epithelium | 1.00e-07 | 23 |
hemolymphoid system gland | 1.00e-07 | 23 |
pharyngeal epithelium | 1.00e-07 | 23 |
thymic region | 1.00e-07 | 23 |
pharyngeal gland | 1.00e-07 | 23 |
entire pharyngeal arch endoderm | 1.00e-07 | 23 |
thymus primordium | 1.00e-07 | 23 |
early pharyngeal endoderm | 1.00e-07 | 23 |
pharynx | 2.29e-07 | 24 |
gland of gut | 2.29e-07 | 24 |
upper respiratory tract | 2.29e-07 | 24 |
chordate pharynx | 2.29e-07 | 24 |
pharyngeal arch system | 2.29e-07 | 24 |
pharyngeal region of foregut | 2.29e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.