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FFCP PHASE1:Mm9::chr11:77161774..77161794,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=237860|HGNC=|MCL_coexpression_id=1503|UniProt=Q5SW75|association_with_transcript=0bp_to_ENSMUST00000127890,uc007kgn.1,uc007kgo.1_5end|description=CAGE_peak_2_at_Ssh2_5end|id=chr11:77161774..77161794,+|ontology_enrichment_celltype=CL:0002031!1.27e-08!25;CL:0000988!8.50e-08!32;CL:0002032!8.50e-08!32;CL:0000037!8.50e-08!32;CL:0000566!8.50e-08!32;CL:0000837!8.50e-08!32;CL:0002320!1.78e-07!46;CL:0000134!1.78e-07!46|ontology_enrichment_celltype_v019_2=CL:0002031,1.27e-08,25;CL:0000988,8.48e-08,32;CL:0002032,8.48e-08,32;CL:0000037,8.48e-08,32;CL:0000837,8.48e-08,32;CL:0002320,1.78e-07,46;CL:0000134,1.78e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!1.03e-15!193;UBERON:0004120!1.03e-15!193;UBERON:0006603!1.03e-15!193;UBERON:0003081!1.55e-15!88;UBERON:0002405!3.34e-13!70;UBERON:0001048!8.11e-12!147;UBERON:0002193!1.08e-10!48;UBERON:0002390!3.04e-10!45;UBERON:0003061!3.04e-10!45;UBERON:0007100!2.02e-09!18;UBERON:0000948!2.02e-09!18;UBERON:0005498!2.02e-09!18;UBERON:0004140!2.02e-09!18;UBERON:0009881!2.02e-09!18;UBERON:0004141!2.02e-09!18;UBERON:0003084!2.02e-09!18;UBERON:0007005!2.02e-09!18;UBERON:0004139!2.02e-09!18;UBERON:0004291!2.02e-09!18;UBERON:0003914!5.45e-09!47;UBERON:0005057!1.29e-08!51;UBERON:0001041!5.09e-08!92;UBERON:0004872!6.07e-08!33;UBERON:0001004!7.95e-08!42;UBERON:0000065!1.24e-07!41;UBERON:0004535!1.43e-07!23;UBERON:0001009!1.43e-07!23;UBERON:0000077!1.56e-07!97;UBERON:0002384!1.78e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0003081,5.86e-15,87;UBERON:0000926,3.37e-13,120;UBERON:0004120,3.37e-13,120;UBERON:0006603,3.37e-13,120;UBERON:0001048,3.81e-12,134;UBERON:0002193,1.07e-10,48;UBERON:0002405,1.07e-10,48;UBERON:0002390,3.03e-10,45;UBERON:0003061,3.03e-10,45;UBERON:0007100,2.02e-09,18;UBERON:0000948,2.02e-09,18;UBERON:0005498,2.02e-09,18;UBERON:0004140,2.02e-09,18;UBERON:0009881,2.02e-09,18;UBERON:0004141,2.02e-09,18;UBERON:0003084,2.02e-09,18;UBERON:0007005,2.02e-09,18;UBERON:0004139,2.02e-09,18;UBERON:0004291,2.02e-09,18;UBERON:0001041,3.66e-09,80;UBERON:0003914,5.53e-09,47;UBERON:0004872,6.17e-08,33;UBERON:0001004,7.94e-08,42;UBERON:0000065,1.24e-07,41;UBERON:0004535,1.46e-07,23;UBERON:0001009,1.46e-07,23;UBERON:0002384,1.78e-07,46|phase1_expression=3.52327463630547,0.697950815278722,1.36499771816861,0.30246421130683,2.50447864973174,3.02182689441402,3.73780224952841,139.582312640344,111.363879221968,109.542198318693,8.04724450659873,7.25926646857561,199.962452559648,169.508160290436,28.647439516147,30.3712901084739,9.09430441566591,92.5881455326428,126.830851085308,121.375440414237,15.7330086779479,15.8865521921416,19.8511839745591,9.5995453676044,9.63518980482114,0.57423196411502,1.29228598847722,2.58565479223067,0.760093677825496,3.02436155711917,3.32595765982957,6.98533740805594,5.53558308826113,15.8481681015439,2.59966457776147,1.99481574430191,3.87921776898501,135.604248358758,79.6962051414276,57.5876118371178,202.351631882669,205.596690972492,83.9932910743896,3.52511090331616,3.04130793658544,0.734187008646726,17.2126095756569,0.65407546914134,2.19686182734472,4.47188767870852,7.55926676776958,0,141.272954300614,378.639038129922,376.761148838702,21.3525331909836,54.154820148425,44.34779993586,1.01158230429799,1.05798195854407,0.633831403506179,2.71075625655306,4.4464739805557,28.7967909530048,31.6437236021432,34.8135256323589,14.081205194365,18.4424786554346,1.65903379693564,1.21505344498522,1.89292465216244,2.57085885963423,2.87129103237098,0.979926393719632,0.862609239164127,1.83843757322004,3.30347642998166,4.59674417106676,4.45458946443106,0.923204014111357,0.823388792421687,2.08365348222704,3.90856198601933,2.8138130501584,5.04234217663473,4.71405736757868,4.6982654663704,1.4911955666024,4.92220256665696,4.53429360640713,75.9444960398396,24.0918685554788,6.79971333707751,10.2543606411185,14.9448576012964,36.7382047419815,20.0835520788405,3.06774580640504,3.63700406444016,3.18005617059306,2.53518155598025,33.3648841277226,30.5766287647975,28.4426681261332,3.46385665617943,4.30711771307668,4.54972000513305,18.8403401536449,111.861165735578,9.94562331734326,4.3371331691534,3.04465478312141,4.38169444786511,5.42601505989441,9.64227398512779,7.1629957057915,5.93267922562497,56.1045504849257,35.384422077995,11.4854463462661,31.5803371398363,38.3051449976825,9.31958806090611,4.9772735491963,3.14170060220183,8.17462576667492,25.4008063952551,18.5969846607956,14.4860058863294,2.24685959107234,6.40500843946077,0.753926112677186,4.86708096538374,5.11430914660661,2.0778804455956,4.54275536589721,5.70300437561771,33.8386960059453,8.84529654517861,11.3638602178696,1.30120442962704,0.919608417733892,1.80062129805349,3.46621081022145,3.46986145671772,1.92170580427275,2.90475346135159,10.8655415710387,2.58681591519411,3.78212160335639,2.99116911078713,3.72632745126877,4.17070873838397,4.179025998266,5.55611768301447,2.38841120182192,11.937624184325,5.91900186363845,5.96743348730745,23.8194638415827,18.9966108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|EntrezGene=237860
|HGNC=
|MCL_coexpression_id=1503
|UniProt=Q5SW75
|association_with_transcript=0bp_to_ENSMUST00000127890,uc007kgn.1,uc007kgo.1_5end
|description=CAGE_peak_2_at_Ssh2_5end
|id=chr11:77161774..77161794,+
|ontology_enrichment_celltype=CL:0002031!1.27e-08!25;CL:0000988!8.50e-08!32;CL:0002032!8.50e-08!32;CL:0000037!8.50e-08!32;CL:0000566!8.50e-08!32;CL:0000837!8.50e-08!32;CL:0002320!1.78e-07!46;CL:0000134!1.78e-07!46
|ontology_enrichment_celltype_v019_2=CL:0002031,1.27e-08,25;CL:0000988,8.48e-08,32;CL:0002032,8.48e-08,32;CL:0000037,8.48e-08,32;CL:0000837,8.48e-08,32;CL:0002320,1.78e-07,46;CL:0000134,1.78e-07,46
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!1.03e-15!193;UBERON:0004120!1.03e-15!193;UBERON:0006603!1.03e-15!193;UBERON:0003081!1.55e-15!88;UBERON:0002405!3.34e-13!70;UBERON:0001048!8.11e-12!147;UBERON:0002193!1.08e-10!48;UBERON:0002390!3.04e-10!45;UBERON:0003061!3.04e-10!45;UBERON:0007100!2.02e-09!18;UBERON:0000948!2.02e-09!18;UBERON:0005498!2.02e-09!18;UBERON:0004140!2.02e-09!18;UBERON:0009881!2.02e-09!18;UBERON:0004141!2.02e-09!18;UBERON:0003084!2.02e-09!18;UBERON:0007005!2.02e-09!18;UBERON:0004139!2.02e-09!18;UBERON:0004291!2.02e-09!18;UBERON:0003914!5.45e-09!47;UBERON:0005057!1.29e-08!51;UBERON:0001041!5.09e-08!92;UBERON:0004872!6.07e-08!33;UBERON:0001004!7.95e-08!42;UBERON:0000065!1.24e-07!41;UBERON:0004535!1.43e-07!23;UBERON:0001009!1.43e-07!23;UBERON:0000077!1.56e-07!97;UBERON:0002384!1.78e-07!46
|ontology_enrichment_uberon_v019_2=UBERON:0003081,5.86e-15,87;UBERON:0000926,3.37e-13,120;UBERON:0004120,3.37e-13,120;UBERON:0006603,3.37e-13,120;UBERON:0001048,3.81e-12,134;UBERON:0002193,1.07e-10,48;UBERON:0002405,1.07e-10,48;UBERON:0002390,3.03e-10,45;UBERON:0003061,3.03e-10,45;UBERON:0007100,2.02e-09,18;UBERON:0000948,2.02e-09,18;UBERON:0005498,2.02e-09,18;UBERON:0004140,2.02e-09,18;UBERON:0009881,2.02e-09,18;UBERON:0004141,2.02e-09,18;UBERON:0003084,2.02e-09,18;UBERON:0007005,2.02e-09,18;UBERON:0004139,2.02e-09,18;UBERON:0004291,2.02e-09,18;UBERON:0001041,3.66e-09,80;UBERON:0003914,5.53e-09,47;UBERON:0004872,6.17e-08,33;UBERON:0001004,7.94e-08,42;UBERON:0000065,1.24e-07,41;UBERON:0004535,1.46e-07,23;UBERON:0001009,1.46e-07,23;UBERON:0002384,1.78e-07,46
|phase1_expression=3.52327463630547,0.697950815278722,1.36499771816861,0.30246421130683,2.50447864973174,3.02182689441402,3.73780224952841,139.582312640344,111.363879221968,109.542198318693,8.04724450659873,7.25926646857561,199.962452559648,169.508160290436,28.647439516147,30.3712901084739,9.09430441566591,92.5881455326428,126.830851085308,121.375440414237,15.7330086779479,15.8865521921416,19.8511839745591,9.5995453676044,9.63518980482114,0.57423196411502,1.29228598847722,2.58565479223067,0.760093677825496,3.02436155711917,3.32595765982957,6.98533740805594,5.53558308826113,15.8481681015439,2.59966457776147,1.99481574430191,3.87921776898501,135.604248358758,79.6962051414276,57.5876118371178,202.351631882669,205.596690972492,83.9932910743896,3.52511090331616,3.04130793658544,0.734187008646726,17.2126095756569,0.65407546914134,2.19686182734472,4.47188767870852,7.55926676776958,0,141.272954300614,378.639038129922,376.761148838702,21.3525331909836,54.154820148425,44.34779993586,1.01158230429799,1.05798195854407,0.633831403506179,2.71075625655306,4.4464739805557,28.7967909530048,31.6437236021432,34.8135256323589,14.081205194365,18.4424786554346,1.65903379693564,1.21505344498522,1.89292465216244,2.57085885963423,2.87129103237098,0.979926393719632,0.862609239164127,1.83843757322004,3.30347642998166,4.59674417106676,4.45458946443106,0.923204014111357,0.823388792421687,2.08365348222704,3.90856198601933,2.8138130501584,5.04234217663473,4.71405736757868,4.6982654663704,1.4911955666024,4.92220256665696,4.53429360640713,75.9444960398396,24.0918685554788,6.79971333707751,10.2543606411185,14.9448576012964,36.7382047419815,20.0835520788405,3.06774580640504,3.63700406444016,3.18005617059306,2.53518155598025,33.3648841277226,30.5766287647975,28.4426681261332,3.46385665617943,4.30711771307668,4.54972000513305,18.8403401536449,111.861165735578,9.94562331734326,4.3371331691534,3.04465478312141,4.38169444786511,5.42601505989441,9.64227398512779,7.1629957057915,5.93267922562497,56.1045504849257,35.384422077995,11.4854463462661,31.5803371398363,38.3051449976825,9.31958806090611,4.9772735491963,3.14170060220183,8.17462576667492,25.4008063952551,18.5969846607956,14.4860058863294,2.24685959107234,6.40500843946077,0.753926112677186,4.86708096538374,5.11430914660661,2.0778804455956,4.54275536589721,5.70300437561771,33.8386960059453,8.84529654517861,11.3638602178696,1.30120442962704,0.919608417733892,1.80062129805349,3.46621081022145,3.46986145671772,1.92170580427275,2.90475346135159,10.8655415710387,2.58681591519411,3.78212160335639,2.99116911078713,3.72632745126877,4.17070873838397,4.179025998266,5.55611768301447,2.38841120182192,11.937624184325,5.91900186363845,5.96743348730745,23.8194638415827,18.9966108584688,28.0896815879183,28.17262353464,35.0240332510379,37.0241070929708,47.6694586738336,40.5092836113425,51.7270466686561,48.8742754243037,55.6527703228133,72.7187221626326,67.2519942156529,65.4259343567331,74.6187688307667,3.78521907415429,2.16099685996497,3.63460661282178,4.49565963328025,1.49301775374664,2.78684006232526,5.28356591420583,4.03367049246685,3.55804870151792,3.99473814836374,7.59246498471219,5.76446341534038,5.27803938480566,7.16243299348143,6.43381487493096,11.6846523125049,6.05186539649144,8.36393347668342,1.51734320762465,2.28497025219458,2.25415471346161,3.46207257337034,2.90928730751439,4.76923575254166,5.88099795255593,4.42830443938806,4.70996183524124,7.65062416315163,20.1587786419261,5.00535317148282,4.12773889737726,6.07127703439105,8.52012509831712,10.6117950291063,8.65727896056827,14.0971107350897,23.6717431091552,11.8061407670875,21.5652309791032,26.4220072844637,21.8426371180192,17.9331003342449,15.9663698034502,14.473305640901,64.1093569878118,5.68474235311454,7.65935389277522,7.97801903143384,11.0304416695596,24.7909261013887,32.3739351604979,49.3688129080231,31.8422991094506,36.0987444127503,38.5880540151119,51.4530808207417,53.0142894328299,60.1740083699088,30.1582567878545,23.9318500880232,10.8188140064188,17.1080782708934,5.77982123956051,3.6335622843583,0,64.3800864371151,1.89304931649754,1.95219372148319,1.93881057959519,1.19484398976276,1.78238939265915,1.41538265394416,2.02405350837447,2.04579100537918,1.58115111178609,5.14114106274891,12.9165477539524,3.38324646967785,6.67836533349662,13.0326397148303,11.9470624505967,1.45668381692989,4.53485335447127,3.39489143560617,2.95301892880773,10.1453598821496,5.68542244970086,9.81541069589265,6.06045543254026,14.8537276229834,14.7586052004998,12.3762651897824,3.06395645178409,1.8006109403131,1.55230420539305,2.7863814554107,2.12808280370728,3.92411398724555,6.58196082408484,8.22055362609418,3.28540391289194,5.08396970073168,4.41056796109924,15.6641940294406,20.50598219038,8.32318364008551,6.44610657616937,5.25250879184196,10.4933101186746,7.04616147639937,30.2441459012199,14.859854493352,24.2604830854322,13.7508973613424,18.3170265146174,19.9037010689675,33.3157722787956,37.7868921273877,40.4925923246962,0,2.37251995185852,5.28630614529807,4.21220829205025,4.59994251231831,5.45906409365444,6.06889558731693,8.10003866108292,8.89970202745701,7.77689839750757,16.1548221402601,2.81846469342095,4.63501292736334,4.79829622325583,8.36140109879405,6.97463046779748,8.44780627453891,10.5621514781179,13.9318691783027,24.4322272511906,7.9722759872582,15.5536203379247,18.0126338758062,5.0681303822541,7.80603274452687,6.36612032591196,8.95133478337407,13.510332125126,17.3081447308755,17.4273642066001,12.317906893674,13.945845617865,14.6197968448419,22.025481047184,18.4726735949433,22.7909959254059,37.1837829128947,0.665957860122194,0.0897138566094757,0.335769232728157,17.3870634628971,12.387043379778,15.3847364384503,9.86094543763703,15.5487352250963,5.64751842617067,4.60325236507177,8.59343270159095,6.18671456437275,3.42541259885321,6.0431511791176,5.40018000185445,7.20513925158753,4.98456649882625,4.14208249401456,1.45302286617847,4.78829848081237,2.39027048055788,5.34834777550247,3.14419743941973,5.33146174505041,8.66762238426299,9.88968274746692,12.5158491740808,8.08631077644152,9.37873409593887,8.67681170375951,11.7988299412052,9.98792377515961,9.59172331558742,10.9547548995107,11.0090109647613,7.7163688185482,9.47797571847605,12.8063060516926,7.54312355247914,11.1809757880383,9.53744759789284,8.57543858130738,12.3283288344083,9.89990912332615,10.2439664808753,10.2597187460759,10.5927208799772,11.7839877048125,10.0839765405548,10.4414751318097,11.4584692087513,14.2541893891089,5.20847849649082,5.24602213669686,12.3983752476066,17.1896843238639,28.6932498103265,18.7502706251588,21.0999730414584
|short_description=p2@Ssh2
}}

Revision as of 20:58, 12 September 2013

Short description:p2@Ssh2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ssh2_5end
Coexpression cluster:MCL_coexpression_mm9:1503
Association with transcript: 0bp_to_ENSMUST00000127890, uc007kgn.1, uc007kgo.1_5end
EntrezGene:Ssh2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ssh2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9139.58
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7111.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2109.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.26
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4199.96
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8169.51
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A128.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A330.37
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A292.59
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4126.83
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6121.38
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.73
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H215.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I919.85
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.64
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I22.59
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8135.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H179.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H357.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9202.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2205.60
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H483.99
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.53
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.04
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B717.21
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2141.27
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9378.64
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1376.76
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C121.35
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E154.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C544.35
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C728.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E731.64
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D234.81
Mouse Microglia, donor1.CNhs12629.11718-123C814.08
Mouse Microglia, donor2.CNhs12634.11736-123E818.44
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D94.92
Mouse Schwann, donor2.CNhs12573.11746-123F94.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G375.94
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.09
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F414.94
Mouse hepatocyte, donor8.CNhs13091.11824-124F636.74
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H133.36
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I830.58
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B618.84
accessory axillary lymph node, adult.CNhs10475.1063-29H9111.86
adrenal gland, adult.CNhs10508.49-24D79.95
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F55.43
adrenal gland, neonate N00.CNhs11191.1311-23C19.64
adrenal gland, neonate N25.CNhs11223.1377-27I37.16
amnion, adult pregnant day17.5.CNhs10488.583-22A85.93
aorta, adult.CNhs10498.46-23H156.10
bone (os femoris), adult.CNhs10483.56-12G235.38
bone (os femoris), neonate N02.CNhs11227.1985-43F511.49
bone (os femoris), neonate N16.CNhs11225.1525-43A631.58
bone (os femoris), neonate N20.CNhs11195.1350-25C338.31
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H78.17
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C725.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D118.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D414.49
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.70
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A233.84
epididymis, adult.CNhs10490.58-23B28.85
eyeball, adult.CNhs10484.31-12G411.36
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D43.47
eyeball, neonate N00.CNhs11207.633-15C63.47
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G82.90
eyeball, neonate N16.CNhs11188.777-19A210.87
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A83.73
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B55.56
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.94
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.92
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.97
heart, embryo E11.CNhs10586.331-24E923.82
heart, embryo E12.CNhs11015.353-12F519.00
heart, embryo E13.CNhs11013.376-3I928.09
heart, embryo E14.CNhs10597.403-26D428.17
heart, embryo E15.CNhs11017.431-16C835.02
heart, embryo E16.CNhs11021.457-17C637.02
heart, embryo E17.CNhs11025.479-18E547.67
heart, embryo E18.CNhs11030.1283-20G340.51
heart, neonate N00.CNhs11213.639-21E351.73
heart, neonate N03.CNhs11221.1349-25I248.87
heart, neonate N10.CNhs11118.749-24G155.65
heart, neonate N16.CNhs11209.782-15G172.72
heart, neonate N20.CNhs11127.821-26I667.25
heart, neonate N25.CNhs11196.1351-25D365.43
heart, neonate N30.CNhs11202.1390-42D274.62
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A34.50
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D85.28
intestine, embryo E16.CNhs10585.463-22H44.03
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F73.99
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E95.76
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F27.16
intestine, neonate N10.CNhs11098.755-23A56.43
intestine, neonate N20.CNhs11187.827-18D111.68
intestine, neonate N25.CNhs11121.1352-25E36.05
intestine, neonate N30.CNhs11131.1384-42G18.36
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F82.28
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C72.91
kidney, neonate N00.CNhs11214.646-21G74.77
kidney, neonate N10.CNhs11206.758-6D55.88
kidney, neonate N20.CNhs11113.832-19I14.43
kidney, neonate N25.CNhs11122.1353-25F34.71
kidney, neonate N30.CNhs11203.1385-42H17.65
liver, adult pregnant day01.CNhs10466.508-5B220.16
liver, embryo E12.CNhs10601.355-15F85.01
liver, embryo E13.CNhs10524.378-3H64.13
liver, embryo E14.CNhs10594.409-16E16.07
liver, embryo E15.CNhs10520.433-16D78.52
liver, embryo E16.CNhs10523.462-17F510.61
liver, embryo E17.CNhs10510.481-18A38.66
liver, embryo E18.CNhs10579.499-43G414.10
liver, neonate N00.CNhs11117.641-24F423.67
liver, neonate N03.CNhs11123.1345-25G211.81
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H226.42
liver, neonate N10.CNhs11115.751-24B921.84
liver, neonate N20.CNhs11220.823-25A317.93
liver, neonate N25.CNhs11198.1368-26H115.97
liver, neonate N30.CNhs11106.1382-42D114.47
lung, adult.CNhs10474.28-22B164.11
lung, embryo E12.CNhs10522.354-16G25.68
lung, embryo E14.CNhs10604.404-26F87.66
lung, embryo E15.CNhs11020.432-17C57.98
lung, embryo E16.CNhs10998.458-17B611.03
lung, embryo E17.CNhs10605.480-44A624.79
lung, embryo E18.CNhs10583.1287-20I632.37
lung, neonate N00.CNhs11224.640-42C649.37
lung, neonate N06.CNhs11212.683-20E531.84
lung, neonate N07.CNhs11111.715-19A336.10
lung, neonate N10.CNhs11219.750-23E638.59
lung, neonate N20.CNhs11109.822-18A451.45
lung, neonate N25.CNhs11119.1359-25C753.01
lung, neonate N30.CNhs11133.1394-42H260.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A130.16
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A123.93
mammary gland, adult lactating day02.CNhs10480.595-22B610.82
mammary gland, adult pregnant day19.CNhs10476.588-5H217.11
medulla oblongata, adult.CNhs10477.17-12C25.78
medulla oblongata, neonate N30.CNhs11200.1396-42A33.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C264.38
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I712.92
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I46.68
oviduct, adult pregnant day01.CNhs10500.988-6G613.03
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I710.15
pancreas, neonate N00.CNhs11105.645-26G95.69
pancreas, neonate N01.CNhs11138.1531-43D79.82
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B614.85
pancreas, neonate N25.CNhs11094.1555-45E214.76
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F56.58
pituitary gland, neonate N00.CNhs11190.1308-22E98.22
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G35.08
prostate, adult.CNhs10470.859-1F84.41
skin, adult.CNhs10492.30-1C315.66
skin, neonate N00.CNhs11124.650-25G420.51
skin, neonate N03.CNhs11215.662-22H38.32
skin, neonate N06.CNhs11097.693-20I56.45
skin, neonate N10.CNhs11108.762-6C45.25
small intestine, neonate N16.CNhs11114.790-21I110.49
spinal cord, adult.CNhs10505.24-13C97.05
spleen, adult.CNhs10465.25-2G230.24
spleen, embryo E16.CNhs11035.461-43C114.86
spleen, embryo E18.CNhs11011.1271-21F224.26
spleen, neonate N10.CNhs11116.752-24D113.75
spleen, neonate N20.CNhs11112.824-19H118.32
spleen, neonate N25.CNhs11099.1354-25G319.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C633.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C937.79
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D340.49
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D44.21
stomach, embryo E17.CNhs11006.1035-18D54.60
stomach, embryo E18.CNhs10999.1286-20C65.46
stomach, neonate N03.CNhs11193.1340-24B86.07
stomach, neonate N07.CNhs11210.718-18A98.10
stomach, neonate N25.CNhs11104.1355-25E48.90
stomach, neonate N30.CNhs11134.1386-42I17.78
submandibular gland, adult.CNhs10469.59-29C116.15
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F54.64
testis, embryo E15.CNhs11034.443-27C54.80
testis, embryo E16.CNhs11033.470-26G58.36
testis, embryo E17.CNhs11029.486-18I56.97
testis, embryo E18.CNhs11027.503-18G58.45
testis, neonate N00.CNhs11189.1300-22B710.56
testis, neonate N07.CNhs11222.726-26I413.93
testis, neonate N10.CNhs11204.763-44D924.43
testis, neonate N20.CNhs11110.839-18H37.97
testis, neonate N30.CNhs11130.1391-42E215.55
thymus, adult.CNhs10471.38-12B518.01
thymus, embryo E14.CNhs11041.402-44I45.07
thymus, embryo E15.CNhs11005.430-45I27.81
thymus, embryo E16.CNhs11002.456-26C56.37
thymus, embryo E17.CNhs10581.478-18C18.95
thymus, embryo E18.CNhs10595.1273-19G413.51
thymus, neonate N02.CNhs11181.1541-43F817.31
thymus, neonate N03.CNhs11137.2104-43C717.43
thymus, neonate N06.CNhs11197.681-26C412.32
thymus, neonate N07.CNhs11211.713-19D313.95
thymus, neonate N10.CNhs11194.748-24E414.62
thymus, neonate N20.CNhs11186.820-7A222.03
thymus, neonate N25.CNhs11125.1362-25G718.47
thymus, neonate N30.CNhs11132.1393-42G222.79
tongue, adult.CNhs10499.32-1B437.18
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E417.39
uterus, adult pregnant day19.CNhs10497.590-15F512.39
uterus, adult.CNhs10509.92-27E515.38
vagina, adult.CNhs10502.89-27D59.86
vesicular gland, adult.CNhs10491.51-27F815.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F25.33
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.09
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.38
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.80
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.99
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.59
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.81
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.33
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.90
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.24
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.59
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.44
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G514.25
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B312.40
whole body, neonate N00.CNhs10525.657-19C217.19
whole body, neonate N01.CNhs10576.659-23C628.69
whole body, neonate N06.CNhs10515.692-21D118.75
whole body, neonate N10.CNhs10518.761-6B421.10





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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