FFCP PHASE1:Mm9::chr18:74130501..74130519,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=223|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:74130501..74130519,-|id=chr18:74130501..74130519,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!8.37e-24!63;UBERON:0000970!1.38e-21!9;UBERON:0000019!1.38e-21!9;UBERON:0000047!1.38e-21!9;UBERON:0004088!1.38e-21!9;UBERON:0002104!1.38e-21!9;UBERON:0001456!1.38e-21!9;UBERON:0003072!1.38e-21!9;UBERON:0003071!1.38e-21!9;UBERON:0004128!1.38e-21!9;UBERON:0002346!2.85e-20!71;UBERON:0003075!2.85e-20!71;UBERON:0007284!2.85e-20!71;UBERON:0003056!2.13e-18!49;UBERON:0001444!2.57e-17!11;UBERON:0000020!1.02e-15!12;UBERON:0001032!1.02e-15!12;UBERON:0004456!1.02e-15!12;UBERON:0007811!1.18e-15!86;UBERON:0004121!1.75e-14!102;UBERON:0000924!1.75e-14!102;UBERON:0006601!1.75e-14!102;UBERON:0005085!2.32e-14!13;UBERON:0000153!9.26e-14!94;UBERON:0000955!1.88e-12!50;UBERON:0006238!1.88e-12!50;UBERON:0001049!1.02e-11!52;UBERON:0005068!1.02e-11!52;UBERON:0006241!1.02e-11!52;UBERON:0007135!1.02e-11!52;UBERON:0002616!2.73e-11!49;UBERON:0004733!1.70e-10!6;UBERON:0004732!1.70e-10!6;UBERON:0002028!1.70e-10!6;UBERON:0007277!1.70e-10!6;UBERON:0001017!4.07e-09!73;UBERON:0005743!4.07e-09!73;UBERON:0000073!9.57e-09!75;UBERON:0001016!9.57e-09!75;UBERON:0002780!4.92e-07!39;UBERON:0001890!4.92e-07!39;UBERON:0006240!4.92e-07!39;UBERON:0003076!8.47e-07!12;UBERON:0003057!8.47e-07!12;UBERON:0003080!8.60e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.17e-13,4;UBERON:0002680,1.17e-13,4;UBERON:0001895,1.17e-13,4;UBERON:0010092,1.17e-13,4;UBERON:0006215,1.17e-13,4;UBERON:0000970,4.95e-13,9;UBERON:0000019,4.95e-13,9;UBERON:0000047,4.95e-13,9;UBERON:0010312,4.95e-13,9;UBERON:0004088,4.95e-13,9;UBERON:0002104,4.95e-13,9;UBERON:0001456,4.95e-13,9;UBERON:0003072,4.95e-13,9;UBERON:0004128,4.95e-13,9;UBERON:0003071,4.95e-13,9;UBERON:0001444,8.54e-11,11;UBERON:0000020,5.93e-10,12;UBERON:0001032,5.93e-10,12;UBERON:0004456,5.93e-10,12;UBERON:0002346,9.52e-10,64;UBERON:0003075,9.52e-10,64;UBERON:0007284,9.52e-10,64;UBERON:0004733,1.96e-09,6;UBERON:0004732,1.96e-09,6;UBERON:0002028,1.96e-09,6;UBERON:0007277,1.96e-09,6;UBERON:0000033,3.07e-09,13;UBERON:0005085,3.07e-09,13;UBERON:0010371,1.47e-08,73;UBERON:0010314,8.41e-07,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80615036115011,2.72280718857492,0,0,0,0,0,1.83000241127451,0,0.173824320192276,0.255715457330331,0.20778804455956,0.486723789203273,0,0,0,2.31486041475121,1.30120442962704,0.459804208866946,0.540186389416048,0.90422890701429,0.544291993210623,0.512454881139399,0.562210347358373,2.32833033665114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.25724871410318,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:74130501..74130519,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=223 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:74130501..74130519,- | |||
|id=chr18:74130501..74130519,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!8.37e-24!63;UBERON:0000970!1.38e-21!9;UBERON:0000019!1.38e-21!9;UBERON:0000047!1.38e-21!9;UBERON:0004088!1.38e-21!9;UBERON:0002104!1.38e-21!9;UBERON:0001456!1.38e-21!9;UBERON:0003072!1.38e-21!9;UBERON:0003071!1.38e-21!9;UBERON:0004128!1.38e-21!9;UBERON:0002346!2.85e-20!71;UBERON:0003075!2.85e-20!71;UBERON:0007284!2.85e-20!71;UBERON:0003056!2.13e-18!49;UBERON:0001444!2.57e-17!11;UBERON:0000020!1.02e-15!12;UBERON:0001032!1.02e-15!12;UBERON:0004456!1.02e-15!12;UBERON:0007811!1.18e-15!86;UBERON:0004121!1.75e-14!102;UBERON:0000924!1.75e-14!102;UBERON:0006601!1.75e-14!102;UBERON:0005085!2.32e-14!13;UBERON:0000153!9.26e-14!94;UBERON:0000955!1.88e-12!50;UBERON:0006238!1.88e-12!50;UBERON:0001049!1.02e-11!52;UBERON:0005068!1.02e-11!52;UBERON:0006241!1.02e-11!52;UBERON:0007135!1.02e-11!52;UBERON:0002616!2.73e-11!49;UBERON:0004733!1.70e-10!6;UBERON:0004732!1.70e-10!6;UBERON:0002028!1.70e-10!6;UBERON:0007277!1.70e-10!6;UBERON:0001017!4.07e-09!73;UBERON:0005743!4.07e-09!73;UBERON:0000073!9.57e-09!75;UBERON:0001016!9.57e-09!75;UBERON:0002780!4.92e-07!39;UBERON:0001890!4.92e-07!39;UBERON:0006240!4.92e-07!39;UBERON:0003076!8.47e-07!12;UBERON:0003057!8.47e-07!12;UBERON:0003080!8.60e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.17e-13,4;UBERON:0002680,1.17e-13,4;UBERON:0001895,1.17e-13,4;UBERON:0010092,1.17e-13,4;UBERON:0006215,1.17e-13,4;UBERON:0000970,4.95e-13,9;UBERON:0000019,4.95e-13,9;UBERON:0000047,4.95e-13,9;UBERON:0010312,4.95e-13,9;UBERON:0004088,4.95e-13,9;UBERON:0002104,4.95e-13,9;UBERON:0001456,4.95e-13,9;UBERON:0003072,4.95e-13,9;UBERON:0004128,4.95e-13,9;UBERON:0003071,4.95e-13,9;UBERON:0001444,8.54e-11,11;UBERON:0000020,5.93e-10,12;UBERON:0001032,5.93e-10,12;UBERON:0004456,5.93e-10,12;UBERON:0002346,9.52e-10,64;UBERON:0003075,9.52e-10,64;UBERON:0007284,9.52e-10,64;UBERON:0004733,1.96e-09,6;UBERON:0004732,1.96e-09,6;UBERON:0002028,1.96e-09,6;UBERON:0007277,1.96e-09,6;UBERON:0000033,3.07e-09,13;UBERON:0005085,3.07e-09,13;UBERON:0010371,1.47e-08,73;UBERON:0010314,8.41e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80615036115011,2.72280718857492,0,0,0,0,0,1.83000241127451,0,0.173824320192276,0.255715457330331,0.20778804455956,0.486723789203273,0,0,0,2.31486041475121,1.30120442962704,0.459804208866946,0.540186389416048,0.90422890701429,0.544291993210623,0.512454881139399,0.562210347358373,2.32833033665114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.25724871410318,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:74130501..74130519,- | |||
}} |
Revision as of 16:43, 13 September 2013
Short description: | p@chr18:74130501..74130519, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:74130501..74130519, - |
Coexpression cluster: | MCL_coexpression_mm9:223 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.17e-13 | 4 |
regional part of metencephalon | 1.17e-13 | 4 |
metencephalon | 1.17e-13 | 4 |
future metencephalon | 1.17e-13 | 4 |
rhombic lip | 1.17e-13 | 4 |
eye | 4.95e-13 | 9 |
camera-type eye | 4.95e-13 | 9 |
simple eye | 4.95e-13 | 9 |
immature eye | 4.95e-13 | 9 |
ocular region | 4.95e-13 | 9 |
visual system | 4.95e-13 | 9 |
face | 4.95e-13 | 9 |
optic cup | 4.95e-13 | 9 |
optic vesicle | 4.95e-13 | 9 |
eye primordium | 4.95e-13 | 9 |
subdivision of head | 8.54e-11 | 11 |
sense organ | 5.93e-10 | 12 |
sensory system | 5.93e-10 | 12 |
entire sense organ system | 5.93e-10 | 12 |
neurectoderm | 9.52e-10 | 64 |
neural plate | 9.52e-10 | 64 |
presumptive neural plate | 9.52e-10 | 64 |
segmental subdivision of hindbrain | 1.96e-09 | 6 |
segmental subdivision of nervous system | 1.96e-09 | 6 |
hindbrain | 1.96e-09 | 6 |
presumptive hindbrain | 1.96e-09 | 6 |
head | 3.07e-09 | 13 |
ectodermal placode | 3.07e-09 | 13 |
ecto-epithelium | 1.47e-08 | 73 |
structure with developmental contribution from neural crest | 8.41e-07 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.