FFCP PHASE1:Mm9::chr5:32001104..32001125,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=962|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:32001104..32001125,+|id=chr5:32001104..32001125,+|ontology_enrichment_celltype=CL:0000838!1.83e-22!12;CL:0000791!6.58e-21!9;CL:0000789!6.58e-21!9;CL:0002420!6.58e-21!9;CL:0002419!6.58e-21!9;CL:0000790!6.58e-21!9;CL:0000542!1.56e-20!13;CL:0000051!1.56e-20!13;CL:0000084!3.85e-20!11;CL:0000827!3.85e-20!11;CL:0000624!1.39e-18!8;CL:0002031!6.79e-16!25;CL:0000988!1.38e-15!32;CL:0002032!1.38e-15!32;CL:0000037!1.38e-15!32;CL:0000566!1.38e-15!32;CL:0000837!1.38e-15!32;CL:0000738!4.34e-15!17;CL:0002087!4.34e-15!17;CL:0000893!2.82e-14!6;CL:0002489!2.82e-14!6;CL:0000898!2.82e-14!6;CL:0000809!2.82e-14!6;CL:0000810!2.82e-14!6;CL:0000895!2.82e-14!6;CL:0000808!2.82e-14!6;CL:0000894!2.82e-14!6;CL:0000806!2.82e-14!6;CL:0000807!2.82e-14!6;CL:0000805!2.82e-14!6;CL:0002425!2.82e-14!6;CL:0002436!2.82e-14!6;CL:0002427!2.82e-14!6;CL:0002428!2.82e-14!6;CL:0002429!2.82e-14!6;CL:0002433!2.82e-14!6;CL:0002431!2.82e-14!6;CL:0002432!2.82e-14!6;CL:0000063!7.53e-12!66;CL:0002320!1.25e-09!46;CL:0000134!1.25e-09!46;CL:0000219!1.19e-08!54;CL:0000144!8.38e-07!121;CL:0000012!8.38e-07!121|ontology_enrichment_celltype_v019_2=CL:0000791,1.21e-39,9;CL:0000789,1.21e-39,9;CL:0002420,1.21e-39,9;CL:0002419,1.21e-39,9;CL:0000790,1.21e-39,9;CL:0000838,6.55e-39,12;CL:0000542,6.88e-36,13;CL:0000051,6.88e-36,13;CL:0000624,1.03e-32,8;CL:0000084,2.13e-32,11;CL:0000827,2.13e-32,11;CL:0000893,2.65e-30,6;CL:0002489,2.65e-30,6;CL:0000898,2.65e-30,6;CL:0000809,2.65e-30,6;CL:0000810,2.65e-30,6;CL:0000895,2.65e-30,6;CL:0000808,2.65e-30,6;CL:0000894,2.65e-30,6;CL:0000806,2.65e-30,6;CL:0000807,2.65e-30,6;CL:0000805,2.65e-30,6;CL:0002425,2.65e-30,6;CL:0002436,2.65e-30,6;CL:0002427,2.65e-30,6;CL:0002428,2.65e-30,6;CL:0002429,2.65e-30,6;CL:0002433,2.65e-30,6;CL:0002431,2.65e-30,6;CL:0002432,2.65e-30,6;CL:0002031,8.62e-29,25;CL:0000738,2.39e-27,17;CL:0002087,2.39e-27,17;CL:0000988,2.43e-22,32;CL:0002032,2.43e-22,32;CL:0000037,2.43e-22,32;CL:0000837,2.43e-22,32;CL:0002320,2.62e-15,46;CL:0000134,2.62e-15,46;CL:0000219,6.47e-13,54;CL:0000945,4.39e-09,1;CL:0000236,4.39e-09,1;CL:0000826,4.39e-09,1;CL:0000625,5.23e-09,1;CL:0000815,6.23e-09,1;CL:0000792,6.23e-09,1;CL:0000034,2.82e-08,97;CL:0000723,2.79e-07,91;CL:0000048,2.79e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.25e-09!46;UBERON:0002370!1.78e-09!23;UBERON:0000974!1.78e-09!23;UBERON:0004807!1.78e-09!23;UBERON:0005058!1.78e-09!23;UBERON:0003351!1.78e-09!23;UBERON:0009113!1.78e-09!23;UBERON:0003295!1.78e-09!23;UBERON:0009722!1.78e-09!23;UBERON:0005562!1.78e-09!23;UBERON:0007690!1.78e-09!23;UBERON:0000072!2.92e-09!27;UBERON:0006562!5.51e-09!24;UBERON:0003408!5.51e-09!24;UBERON:0001557!5.51e-09!24;UBERON:0001042!5.51e-09!24;UBERON:0008814!5.51e-09!24;UBERON:0009145!5.51e-09!24;UBERON:0004177!4.80e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.62e-15,46;UBERON:0002370,5.97e-08,23;UBERON:0000974,5.97e-08,23;UBERON:0004807,5.97e-08,23;UBERON:0005058,5.97e-08,23;UBERON:0003351,5.97e-08,23;UBERON:0009113,5.97e-08,23;UBERON:0003295,5.97e-08,23;UBERON:0009722,5.97e-08,23;UBERON:0005562,5.97e-08,23;UBERON:0007690,5.97e-08,23;UBERON:0006562,1.28e-07,24;UBERON:0003408,1.28e-07,24;UBERON:0001557,1.28e-07,24;UBERON:0001042,1.28e-07,24;UBERON:0008814,1.28e-07,24;UBERON:0009145,1.28e-07,24;UBERON:0002390,1.58e-07,45;UBERON:0003061,1.58e-07,45;UBERON:0002193,5.02e-07,48;UBERON:0002405,5.02e-07,48;UBERON:0000072,9.15e-07,27|phase1_expression=0,0.348975407639361,0,0,0,0,0.233612640595526,2.84071311571468,2.81577444303333,1.40438715793196,1.19852577757853,0.239316476986009,1.36960583944965,1.83582845079895,0,0,0,1.57731082679119,0.411343300817216,1.69755860719212,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.612508068787107,0,0,0,0.588231488031014,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,9.2280433331755,0.725362142011344,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0.958520996047362,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0.849892149969277,0.559805809294632,1.10559979043539,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:32001104..32001125,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=962 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:32001104..32001125,+ | |||
|id=chr5:32001104..32001125,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.83e-22!12;CL:0000791!6.58e-21!9;CL:0000789!6.58e-21!9;CL:0002420!6.58e-21!9;CL:0002419!6.58e-21!9;CL:0000790!6.58e-21!9;CL:0000542!1.56e-20!13;CL:0000051!1.56e-20!13;CL:0000084!3.85e-20!11;CL:0000827!3.85e-20!11;CL:0000624!1.39e-18!8;CL:0002031!6.79e-16!25;CL:0000988!1.38e-15!32;CL:0002032!1.38e-15!32;CL:0000037!1.38e-15!32;CL:0000566!1.38e-15!32;CL:0000837!1.38e-15!32;CL:0000738!4.34e-15!17;CL:0002087!4.34e-15!17;CL:0000893!2.82e-14!6;CL:0002489!2.82e-14!6;CL:0000898!2.82e-14!6;CL:0000809!2.82e-14!6;CL:0000810!2.82e-14!6;CL:0000895!2.82e-14!6;CL:0000808!2.82e-14!6;CL:0000894!2.82e-14!6;CL:0000806!2.82e-14!6;CL:0000807!2.82e-14!6;CL:0000805!2.82e-14!6;CL:0002425!2.82e-14!6;CL:0002436!2.82e-14!6;CL:0002427!2.82e-14!6;CL:0002428!2.82e-14!6;CL:0002429!2.82e-14!6;CL:0002433!2.82e-14!6;CL:0002431!2.82e-14!6;CL:0002432!2.82e-14!6;CL:0000063!7.53e-12!66;CL:0002320!1.25e-09!46;CL:0000134!1.25e-09!46;CL:0000219!1.19e-08!54;CL:0000144!8.38e-07!121;CL:0000012!8.38e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.21e-39,9;CL:0000789,1.21e-39,9;CL:0002420,1.21e-39,9;CL:0002419,1.21e-39,9;CL:0000790,1.21e-39,9;CL:0000838,6.55e-39,12;CL:0000542,6.88e-36,13;CL:0000051,6.88e-36,13;CL:0000624,1.03e-32,8;CL:0000084,2.13e-32,11;CL:0000827,2.13e-32,11;CL:0000893,2.65e-30,6;CL:0002489,2.65e-30,6;CL:0000898,2.65e-30,6;CL:0000809,2.65e-30,6;CL:0000810,2.65e-30,6;CL:0000895,2.65e-30,6;CL:0000808,2.65e-30,6;CL:0000894,2.65e-30,6;CL:0000806,2.65e-30,6;CL:0000807,2.65e-30,6;CL:0000805,2.65e-30,6;CL:0002425,2.65e-30,6;CL:0002436,2.65e-30,6;CL:0002427,2.65e-30,6;CL:0002428,2.65e-30,6;CL:0002429,2.65e-30,6;CL:0002433,2.65e-30,6;CL:0002431,2.65e-30,6;CL:0002432,2.65e-30,6;CL:0002031,8.62e-29,25;CL:0000738,2.39e-27,17;CL:0002087,2.39e-27,17;CL:0000988,2.43e-22,32;CL:0002032,2.43e-22,32;CL:0000037,2.43e-22,32;CL:0000837,2.43e-22,32;CL:0002320,2.62e-15,46;CL:0000134,2.62e-15,46;CL:0000219,6.47e-13,54;CL:0000945,4.39e-09,1;CL:0000236,4.39e-09,1;CL:0000826,4.39e-09,1;CL:0000625,5.23e-09,1;CL:0000815,6.23e-09,1;CL:0000792,6.23e-09,1;CL:0000034,2.82e-08,97;CL:0000723,2.79e-07,91;CL:0000048,2.79e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.25e-09!46;UBERON:0002370!1.78e-09!23;UBERON:0000974!1.78e-09!23;UBERON:0004807!1.78e-09!23;UBERON:0005058!1.78e-09!23;UBERON:0003351!1.78e-09!23;UBERON:0009113!1.78e-09!23;UBERON:0003295!1.78e-09!23;UBERON:0009722!1.78e-09!23;UBERON:0005562!1.78e-09!23;UBERON:0007690!1.78e-09!23;UBERON:0000072!2.92e-09!27;UBERON:0006562!5.51e-09!24;UBERON:0003408!5.51e-09!24;UBERON:0001557!5.51e-09!24;UBERON:0001042!5.51e-09!24;UBERON:0008814!5.51e-09!24;UBERON:0009145!5.51e-09!24;UBERON:0004177!4.80e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.62e-15,46;UBERON:0002370,5.97e-08,23;UBERON:0000974,5.97e-08,23;UBERON:0004807,5.97e-08,23;UBERON:0005058,5.97e-08,23;UBERON:0003351,5.97e-08,23;UBERON:0009113,5.97e-08,23;UBERON:0003295,5.97e-08,23;UBERON:0009722,5.97e-08,23;UBERON:0005562,5.97e-08,23;UBERON:0007690,5.97e-08,23;UBERON:0006562,1.28e-07,24;UBERON:0003408,1.28e-07,24;UBERON:0001557,1.28e-07,24;UBERON:0001042,1.28e-07,24;UBERON:0008814,1.28e-07,24;UBERON:0009145,1.28e-07,24;UBERON:0002390,1.58e-07,45;UBERON:0003061,1.58e-07,45;UBERON:0002193,5.02e-07,48;UBERON:0002405,5.02e-07,48;UBERON:0000072,9.15e-07,27 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0.233612640595526,2.84071311571468,2.81577444303333,1.40438715793196,1.19852577757853,0.239316476986009,1.36960583944965,1.83582845079895,0,0,0,1.57731082679119,0.411343300817216,1.69755860719212,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.612508068787107,0,0,0,0.588231488031014,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,9.2280433331755,0.725362142011344,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0.958520996047362,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0.849892149969277,0.559805809294632,1.10559979043539,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:32001104..32001125,+ | |||
}} |
Revision as of 07:27, 14 September 2013
Short description: | p@chr5:32001104..32001125, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:32001104..32001125, + |
Coexpression cluster: | MCL_coexpression_mm9:962 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.62e-15 | 46 |
thymus | 5.97e-08 | 23 |
neck | 5.97e-08 | 23 |
respiratory system epithelium | 5.97e-08 | 23 |
hemolymphoid system gland | 5.97e-08 | 23 |
pharyngeal epithelium | 5.97e-08 | 23 |
thymic region | 5.97e-08 | 23 |
pharyngeal gland | 5.97e-08 | 23 |
entire pharyngeal arch endoderm | 5.97e-08 | 23 |
thymus primordium | 5.97e-08 | 23 |
early pharyngeal endoderm | 5.97e-08 | 23 |
pharynx | 1.28e-07 | 24 |
gland of gut | 1.28e-07 | 24 |
upper respiratory tract | 1.28e-07 | 24 |
chordate pharynx | 1.28e-07 | 24 |
pharyngeal arch system | 1.28e-07 | 24 |
pharyngeal region of foregut | 1.28e-07 | 24 |
hematopoietic system | 1.58e-07 | 45 |
blood island | 1.58e-07 | 45 |
hemolymphoid system | 5.02e-07 | 48 |
immune system | 5.02e-07 | 48 |
segment of respiratory tract | 9.15e-07 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.