FFCP PHASE1:Mm9::chr11:69810746..69810760,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=64|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:69810746..69810760,-|id=chr11:69810746..69810760,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,5.56e-08,25;CL:0002563,1.76e-07,9;CL:0002251,1.76e-07,9;CL:0000791,2.44e-07,9;CL:0000789,2.44e-07,9;CL:0002420,2.44e-07,9;CL:0002419,2.44e-07,9;CL:0000790,2.44e-07,9;CL:0000075,3.10e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.76e-07,9;UBERON:0004808,1.76e-07,9;UBERON:0001277,1.76e-07,9;UBERON:0000485,2.75e-07,11|phase1_expression=0.160148847104794,2.09385244583617,2.72999543633722,5.74682001482977,8.5152274090879,0.839396359559449,1.86890112476421,2.32421982194837,5.34997144176334,5.61754863172784,3.25314139628459,2.55270908785077,0.513602189793617,0.961624426608971,0.333109761815663,0.404950534779652,0,0.473193248037357,0.274228867211478,0.42438965179803,0.765389611359628,0.496454756004426,0,0.95995453676044,0.45881856213434,4.01962374880514,2.15380998079537,1.29282739611533,0.950117097281869,0,1.33038306393183,4.44521471421742,1.84519436275371,15.8481681015439,1.44425809875637,0.997407872150954,2.04169356262369,0.837063261473815,0,0.523523743973798,2.35292595212406,0,0,1.00717454380462,1.92616169317078,0.917733760808408,0,0.218025156380447,0.659058548203415,0.194429899074283,0.55994568650145,0,1.00669563634642,2.17608642603403,1.00828139742739,0,1.71920063963254,0,0.202316460859598,0,0,0.677689064138264,0,0,2.96659908770092,1.4209602298922,0.299600110518405,0,0,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0.307213066512487,0.131886287730194,0,0,0.279182999001381,0,0.15279824777681,0,0,0.372798891650601,0.37863096666592,0.755715601067855,4.05810284182349,0,0.679971333707751,0,0,0,0.702222100658759,0.681721290312231,0.779358013808606,0.70667914902068,1.12674735821344,0,5.09610479413291,0,0.865964164044856,0.506719730950197,1.01104889002957,0.34255163915718,2.33044095282455,0.593768556259299,0.520455980298408,0.608930956624282,0.922461989024234,0.753613202763113,0.940709657085638,0.376999773989026,0.988779870937496,1.15679485535929,0,0.323533699894818,0.883366073841574,0.484875253135222,1.86391761218122,0.585561594023094,0.209446706813455,0.510914110417183,1.07833612055328,0.599902730993408,0.762421362438388,0,0.457500602818626,0,0.347648640384553,0.255715457330331,0,0.486723789203273,0.305518091550949,0.497627882440372,0.505445516867349,0.841767423545896,0.260240885925407,0.459804208866946,0.180062129805349,0.452114453507145,0.476255494059295,0.512454881139399,0.187403449119458,0.517406741478031,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,1.39023624612799,1.0447564995665,0.205782136407943,0.995171334092466,1.40442637462647,1.28673953557358,0.568326998791185,0.207125772535502,0.234526059981096,0.540186184383045,0.946978942340841,0.196764231747404,0,1.16266972375204,1.07309360559848,0.583826711835847,0.987359099480883,0.656669856316381,0.729619285912702,1.02339991197733,0.878200461164203,0.402619256281115,0,0,0.660837565967596,0.528901133327089,0.426576501070468,0.928946687441754,1.03093969057675,0.403367049246685,1.33426826306922,0.190225626112559,0.949058123089023,0.329397909448022,0.251335208800269,0.994782360205754,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0.685491075658373,0,0.814605311381257,0.969762435838129,0.561086559122548,0.758838445491087,0.442830443938806,0.31399745568275,0.493588655687202,0.296452627087149,0.83422552858047,0,0.449724224769707,0.608580364165509,0.482354319504834,0.50925170356284,0.287696137450811,0.810676133875177,0.274561413188081,1.43768206527355,0,0.624075346229121,0.757736633841335,0.538192240565737,0.964887042726734,0.923765950833023,0.568474235311454,0.977789858652155,0.678980343100753,1.64283173801951,1.84256883185997,2.38043640886014,1.75620283072019,0.315270288212382,1.10732344824387,0.956728611944923,1.63863314715738,0.518054945597687,1.59113964439663,4.52373851817817,0.54390568381871,0.983528546038072,0.275936746304732,0.642202359951168,0.234423373184406,0.163934945376675,0.252470927204373,0.315508219416257,0.390438744296638,0.646270193198397,1.43381278771531,2.00518806674155,2.26461224631066,0.404810701674894,0.876767573733936,1.18586333383957,0,0.425820255624806,0.534196811001766,0.651547837414304,0.659880491890142,0,0.728341908464944,0.604647113929502,0.565815239267694,0,0.614870295887855,0.258428293168221,0.727067458955011,0.356497378384721,0.948110273807448,0,0,0.340439605753788,0.18006109403131,1.03486947026204,0.428674070063185,0.532020700926821,0.713475270408282,0,0.304464949114599,1.64270195644597,0.63549621259146,0.661585194164886,3.62749756471256,0.484393280087717,1.20625849856312,0.835606408021955,1.31312719796049,1.1659233465194,0.18542530201051,0.512612642393558,0.82554747185289,0.925972636848558,0.565105371014073,0.820165366326151,0.457556346413045,0.509935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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=64 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:69810746..69810760,- | |||
|id=chr11:69810746..69810760,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.56e-08,25;CL:0002563,1.76e-07,9;CL:0002251,1.76e-07,9;CL:0000791,2.44e-07,9;CL:0000789,2.44e-07,9;CL:0002420,2.44e-07,9;CL:0002419,2.44e-07,9;CL:0000790,2.44e-07,9;CL:0000075,3.10e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.76e-07,9;UBERON:0004808,1.76e-07,9;UBERON:0001277,1.76e-07,9;UBERON:0000485,2.75e-07,11 | |||
|phase1_expression=0.160148847104794,2.09385244583617,2.72999543633722,5.74682001482977,8.5152274090879,0.839396359559449,1.86890112476421,2.32421982194837,5.34997144176334,5.61754863172784,3.25314139628459,2.55270908785077,0.513602189793617,0.961624426608971,0.333109761815663,0.404950534779652,0,0.473193248037357,0.274228867211478,0.42438965179803,0.765389611359628,0.496454756004426,0,0.95995453676044,0.45881856213434,4.01962374880514,2.15380998079537,1.29282739611533,0.950117097281869,0,1.33038306393183,4.44521471421742,1.84519436275371,15.8481681015439,1.44425809875637,0.997407872150954,2.04169356262369,0.837063261473815,0,0.523523743973798,2.35292595212406,0,0,1.00717454380462,1.92616169317078,0.917733760808408,0,0.218025156380447,0.659058548203415,0.194429899074283,0.55994568650145,0,1.00669563634642,2.17608642603403,1.00828139742739,0,1.71920063963254,0,0.202316460859598,0,0,0.677689064138264,0,0,2.96659908770092,1.4209602298922,0.299600110518405,0,0,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0.307213066512487,0.131886287730194,0,0,0.279182999001381,0,0.15279824777681,0,0,0.372798891650601,0.37863096666592,0.755715601067855,4.05810284182349,0,0.679971333707751,0,0,0,0.702222100658759,0.681721290312231,0.779358013808606,0.70667914902068,1.12674735821344,0,5.09610479413291,0,0.865964164044856,0.506719730950197,1.01104889002957,0.34255163915718,2.33044095282455,0.593768556259299,0.520455980298408,0.608930956624282,0.922461989024234,0.753613202763113,0.940709657085638,0.376999773989026,0.988779870937496,1.15679485535929,0,0.323533699894818,0.883366073841574,0.484875253135222,1.86391761218122,0.585561594023094,0.209446706813455,0.510914110417183,1.07833612055328,0.599902730993408,0.762421362438388,0,0.457500602818626,0,0.347648640384553,0.255715457330331,0,0.486723789203273,0.305518091550949,0.497627882440372,0.505445516867349,0.841767423545896,0.260240885925407,0.459804208866946,0.180062129805349,0.452114453507145,0.476255494059295,0.512454881139399,0.187403449119458,0.517406741478031,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,1.39023624612799,1.0447564995665,0.205782136407943,0.995171334092466,1.40442637462647,1.28673953557358,0.568326998791185,0.207125772535502,0.234526059981096,0.540186184383045,0.946978942340841,0.196764231747404,0,1.16266972375204,1.07309360559848,0.583826711835847,0.987359099480883,0.656669856316381,0.729619285912702,1.02339991197733,0.878200461164203,0.402619256281115,0,0,0.660837565967596,0.528901133327089,0.426576501070468,0.928946687441754,1.03093969057675,0.403367049246685,1.33426826306922,0.190225626112559,0.949058123089023,0.329397909448022,0.251335208800269,0.994782360205754,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0.685491075658373,0,0.814605311381257,0.969762435838129,0.561086559122548,0.758838445491087,0.442830443938806,0.31399745568275,0.493588655687202,0.296452627087149,0.83422552858047,0,0.449724224769707,0.608580364165509,0.482354319504834,0.50925170356284,0.287696137450811,0.810676133875177,0.274561413188081,1.43768206527355,0,0.624075346229121,0.757736633841335,0.538192240565737,0.964887042726734,0.923765950833023,0.568474235311454,0.977789858652155,0.678980343100753,1.64283173801951,1.84256883185997,2.38043640886014,1.75620283072019,0.315270288212382,1.10732344824387,0.956728611944923,1.63863314715738,0.518054945597687,1.59113964439663,4.52373851817817,0.54390568381871,0.983528546038072,0.275936746304732,0.642202359951168,0.234423373184406,0.163934945376675,0.252470927204373,0.315508219416257,0.390438744296638,0.646270193198397,1.43381278771531,2.00518806674155,2.26461224631066,0.404810701674894,0.876767573733936,1.18586333383957,0,0.425820255624806,0.534196811001766,0.651547837414304,0.659880491890142,0,0.728341908464944,0.604647113929502,0.565815239267694,0,0.614870295887855,0.258428293168221,0.727067458955011,0.356497378384721,0.948110273807448,0,0,0.340439605753788,0.18006109403131,1.03486947026204,0.428674070063185,0.532020700926821,0.713475270408282,0,0.304464949114599,1.64270195644597,0.63549621259146,0.661585194164886,3.62749756471256,0.484393280087717,1.20625849856312,0.835606408021955,1.31312719796049,1.1659233465194,0.18542530201051,0.512612642393558,0.82554747185289,0.925972636848558,0.565105371014073,0.820165366326151,0.457556346413045,0.509935289981566,0.559805809294632,0.276399947608848,0,1.26534397432454,0.406638934253697,0.216010681643603,0.418176592028937,0.87345025498471,0.404593039154462,0.41326727862668,0.785267825952089,0,2.4853572523477,0.56369293868419,0.448549638131936,0.165458490457098,0,0.516639293910924,0.168956125490778,0.58678619322877,0.781226309063701,0.943734099831398,0.724752362478018,1.15212002503146,1.26404448251271,0.405450430580328,0.718976700153791,0.25984164595559,0.358053391334963,0.79472541912506,0.240390899039938,0.886137163047463,0.908698049533329,0.685861259894999,0.201652370273681,0.292373642219257,0.673482891482306,0.350630706544707,0.453460767230423,0.443971906748129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| |||
|short_description=p@chr11:69810746..69810760,- | |||
}} | |||
Revision as of 20:41, 12 September 2013
| Short description: | p@chr11:69810746..69810760, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr11:69810746..69810760, - |
| Coexpression cluster: | MCL_coexpression_mm9:64 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 5.56e-08 | 25 |
| intestinal epithelial cell | 1.76e-07 | 9 |
| epithelial cell of alimentary canal | 1.76e-07 | 9 |
| mature alpha-beta T cell | 2.44e-07 | 9 |
| alpha-beta T cell | 2.44e-07 | 9 |
| immature T cell | 2.44e-07 | 9 |
| mature T cell | 2.44e-07 | 9 |
| immature alpha-beta T cell | 2.44e-07 | 9 |
| columnar/cuboidal epithelial cell | 3.10e-07 | 7 |
| Ontology term | p-value | n |
|---|---|---|
| epithelium of mucosa | 1.76e-07 | 9 |
| gastrointestinal system epithelium | 1.76e-07 | 9 |
| intestinal epithelium | 1.76e-07 | 9 |
| simple columnar epithelium | 2.75e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
