Personal tools

FFCP PHASE1:Mm9::chr11:23977565..23977612,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=14025|HGNC=|MCL_coexpression_id=18|UniProt=Q9QYE3,Q5STS7,Q3TP99,Q3US10,Q5STS9,Q5STS8|association_with_transcript=-443bp_to_ENSMUST00000000881,NM_001159289,NM_001242934,NM_016707,uc007ifs.2,uc007ift.2,uc007ifu.2,uc007ifv.2_5end|description=CAGE_peak_5_at_Bcl11a_5end|id=chr11:23977565..23977612,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!6.43e-10!34;UBERON:0002791!4.55e-09!29;UBERON:0003528!4.55e-09!29;UBERON:0001893!4.55e-09!29;UBERON:0000956!1.69e-08!21;UBERON:0001869!1.69e-08!21;UBERON:0000203!1.69e-08!21;UBERON:0003080!5.88e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.84e-11,34;UBERON:0003528,3.33e-10,29;UBERON:0002791,3.33e-10,29;UBERON:0001893,3.33e-10,29;UBERON:0000956,6.69e-10,21;UBERON:0001869,6.69e-10,21;UBERON:0000203,6.69e-10,21;UBERON:0002619,1.98e-07,17;UBERON:0003080,2.57e-07,40;UBERON:0002780,5.16e-07,39;UBERON:0001890,5.16e-07,39;UBERON:0006240,5.16e-07,39;UBERON:0000073,5.32e-07,54;UBERON:0002021,8.47e-07,10;UBERON:0000411,8.47e-07,10;UBERON:0001950,8.47e-07,10|phase1_expression=0.320297694209588,1.39590163055744,1.81999695755814,0,0.500895729946347,2.18243053485457,0.934450562382103,0,0,0,0.171217968225505,0,0,0,9.66018309265422,9.31386229993199,2.09868563438444,32.6503341145776,32.0847774637429,22.0682618934976,1.10556277196391,2.38298282882125,2.61199789138935,2.23989391910769,1.60586496747019,0,0.86152399231815,1.07735616342945,1.90023419456374,1.26015064879965,1.33038306393183,0.635030673459631,0,15.8481681015439,5.48818077527422,2.82598897109437,3.26670970019791,1.67412652294763,0,0.523523743973798,1.17646297606203,1.36609096991689,0.971020706062307,0,0,0,0,0,0,0,0,0,27.6841299995265,0.725362142011344,0.336093799142464,0,0,0,3.43937983461316,5.81890077199236,5.70448263155561,0,0,0,0,0,0,0,8.91730665852908,9.85543349821342,11.7781978356774,1.71390590642282,2.42955395046775,7.96190194897201,11.3097655801519,6.43453150627015,3.30347642998166,1.27687338085188,1.84327839907492,2.37395317914349,1.55528994124096,2.6045668527838,1.3959149950069,0.56276261003168,1.37518422999129,2.06240009831567,2.13557521198654,5.21918448310842,0.075726193333184,0,0,0,0,0,0,0,1.68533304158102,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0.253359865475099,0,1.48439043634778,77.1634893268572,0.148442139064825,0.693941307064543,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0.125666591329675,0,1.15679485535929,7.07688441559899,0.323533699894818,5.30019644304944,3.39412677194655,1.86391761218122,0.585561594023094,0.628340120440365,2.04365644166873,4.91242010474273,1.19980546198682,2.79554499560742,2.99581278809645,6.40500843946077,9.92669381691629,6.77914848749878,4.60287823194595,2.90903262383384,2.75810147215188,0,2.86136032403214,0.505445516867349,2.31486041475121,0.520481771850815,0.459804208866946,0.360124259610698,0.452114453507145,0.272145996605311,0.2562274405697,0.187403449119458,0.517406741478031,1.5089759505299,2.64748512234947,2.63926686245923,2.6303487891309,4.44875598760957,7.66154766348766,6.99659263787008,0,0.702213187313235,1.02939162845886,1.13665399758237,0.414251545071004,1.17263029990548,1.08037236876609,0.710234206755631,0.787056926989615,0.925602677324269,0.930135779001631,0.804820204198858,0.583826711835847,0.822799249567402,0.492502392237286,0.243206428637567,0,0,0.268412837520744,5.04695876553905,3.70456604565424,0.330418782983798,2.3800550999719,0.853153002140936,0.696710015581316,1.54640953586512,1.21010114774006,2.2237804384487,1.14135375667535,2.84717436926707,1.4822905925161,2.26201687920243,1.39269530428806,1.9496408711912,0.898819408654221,1.72910439899755,2.58883655230677,0.189667900953082,0.456994050438915,1.1270773567308,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0.123397163921801,0,6.34011401721157,7.86235980452812,5.17182858485164,5.88294352026658,4.10001171579109,3.05551022137704,1.43848068725405,2.91843408195064,1.09824565275233,0,0.372140947668503,0.624075346229121,0.252578877947112,0.179397413521912,0,1.66277871149944,0.568474235311454,0.651859905768103,0.169745085775188,0.938760993154008,1.34005005953453,1.6663054862021,0.195133647857799,0.472905432318573,0,0.797273843287435,1.3109065177259,1.03610989119537,0.723245292907558,0,0.54390568381871,1.96705709207614,1.65562047782839,1.76605648986571,1.52375192569864,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0,0,11.8888887076069,0.425820255624806,0.178065603667255,0.325773918707152,0.494910368917606,1.32745138339963,0.485561272309963,0.302323556964751,1.88605079755898,1.18120757152309,1.84461088766356,1.29214146584111,1.09060118843252,0.712994756769443,0.948110273807448,1.05418608574999,2.06271086496374,0.680879211507576,0.18006109403131,0.646793418913773,1.92903331528433,1.06404140185364,0,0.493647061806363,0.304464949114599,0,0,0.220528398054962,12.5313552235525,10.4951877352339,6.27254419252821,5.252383136138,4.76008609260678,1.7488850197791,1.29797711407357,18.6249260069659,0.82554747185289,4.07427960213366,6.2161590811548,13.2593400889394,11.6676868335327,8.32894306969891,10.636310376598,8.153798454461,1.90934123603023,0.632671987162271,2.23651413839534,1.72808545314882,2.09088296014469,2.40198820120795,1.48350781023303,1.48776220305605,1.30877970992015,1.42576470620972,4.97071450469541,0,0.149516546043979,0.496375471371293,0.388902376688095,0.129159823477731,0.337912250981556,0.117357238645754,0.39061315453185,0.104859344425711,0,0,0.948033361884535,1.62180172232131,1.54066435747241,1.42912905275575,1.07416017400489,0.79472541912506,1.20195449519969,0.590758108698309,0.706765149637033,0.762068066549998,0.302478555410522,0.38983152295901,0.962118416403295,0.350630706544707,4.30787728868902,0,0,0,0,0,0.549454872801795,3.85863082342319,0.501572104035363,7.34177395402186,5.9842280745933,6.87474616127276,6.70227411140382,6.16574267793578,4.5323633843382,4.72515750162264,10.3573876741571,8.60970577069989,6.21312374102184,0.415149390336707,1.19707462020309,2.04880326904961,4.86213434136588,2.93458427679175,2.75765262675021,2.44471400581777,2.88449080134452,0.64183841918363,2.27427490587418,2.02783439912192,2.26351609663291,2.62196220915671,2.17685518176556,2.1825478203133,1.90517476513229,1.97003354106254,1.92909220463705,2.47251540481984,3.53277408322554,1.71434626192708,2.8396128985494,0.953744759789284,2.76158191601424,1.97629698872194,1.26921911837515,1.09756783723664,2.63069711437843,2.98769050460896,5.61142271657738,2.01679530811096,1.67457620038458,2.04615521584845,1.08455788830176,3.2794123866794,3.74715866906919,1.87145286756327,3.22306581072447,2.10417165275728,1.98532277207564,0.695603506861264|short_description=p5@Bcl11a}}
|EntrezGene=14025
|HGNC=
|MCL_coexpression_id=18
|UniProt=Q9QYE3,Q5STS7,Q3TP99,Q3US10,Q5STS9,Q5STS8
|association_with_transcript=-443bp_to_ENSMUST00000000881,NM_001159289,NM_001242934,NM_016707,uc007ifs.2,uc007ift.2,uc007ifu.2,uc007ifv.2_5end
|description=CAGE_peak_5_at_Bcl11a_5end
|id=chr11:23977565..23977612,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!6.43e-10!34;UBERON:0002791!4.55e-09!29;UBERON:0003528!4.55e-09!29;UBERON:0001893!4.55e-09!29;UBERON:0000956!1.69e-08!21;UBERON:0001869!1.69e-08!21;UBERON:0000203!1.69e-08!21;UBERON:0003080!5.88e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.84e-11,34;UBERON:0003528,3.33e-10,29;UBERON:0002791,3.33e-10,29;UBERON:0001893,3.33e-10,29;UBERON:0000956,6.69e-10,21;UBERON:0001869,6.69e-10,21;UBERON:0000203,6.69e-10,21;UBERON:0002619,1.98e-07,17;UBERON:0003080,2.57e-07,40;UBERON:0002780,5.16e-07,39;UBERON:0001890,5.16e-07,39;UBERON:0006240,5.16e-07,39;UBERON:0000073,5.32e-07,54;UBERON:0002021,8.47e-07,10;UBERON:0000411,8.47e-07,10;UBERON:0001950,8.47e-07,10
|phase1_expression=0.320297694209588,1.39590163055744,1.81999695755814,0,0.500895729946347,2.18243053485457,0.934450562382103,0,0,0,0.171217968225505,0,0,0,9.66018309265422,9.31386229993199,2.09868563438444,32.6503341145776,32.0847774637429,22.0682618934976,1.10556277196391,2.38298282882125,2.61199789138935,2.23989391910769,1.60586496747019,0,0.86152399231815,1.07735616342945,1.90023419456374,1.26015064879965,1.33038306393183,0.635030673459631,0,15.8481681015439,5.48818077527422,2.82598897109437,3.26670970019791,1.67412652294763,0,0.523523743973798,1.17646297606203,1.36609096991689,0.971020706062307,0,0,0,0,0,0,0,0,0,27.6841299995265,0.725362142011344,0.336093799142464,0,0,0,3.43937983461316,5.81890077199236,5.70448263155561,0,0,0,0,0,0,0,8.91730665852908,9.85543349821342,11.7781978356774,1.71390590642282,2.42955395046775,7.96190194897201,11.3097655801519,6.43453150627015,3.30347642998166,1.27687338085188,1.84327839907492,2.37395317914349,1.55528994124096,2.6045668527838,1.3959149950069,0.56276261003168,1.37518422999129,2.06240009831567,2.13557521198654,5.21918448310842,0.075726193333184,0,0,0,0,0,0,0,1.68533304158102,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0.253359865475099,0,1.48439043634778,77.1634893268572,0.148442139064825,0.693941307064543,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0.125666591329675,0,1.15679485535929,7.07688441559899,0.323533699894818,5.30019644304944,3.39412677194655,1.86391761218122,0.585561594023094,0.628340120440365,2.04365644166873,4.91242010474273,1.19980546198682,2.79554499560742,2.99581278809645,6.40500843946077,9.92669381691629,6.77914848749878,4.60287823194595,2.90903262383384,2.75810147215188,0,2.86136032403214,0.505445516867349,2.31486041475121,0.520481771850815,0.459804208866946,0.360124259610698,0.452114453507145,0.272145996605311,0.2562274405697,0.187403449119458,0.517406741478031,1.5089759505299,2.64748512234947,2.63926686245923,2.6303487891309,4.44875598760957,7.66154766348766,6.99659263787008,0,0.702213187313235,1.02939162845886,1.13665399758237,0.414251545071004,1.17263029990548,1.08037236876609,0.710234206755631,0.787056926989615,0.925602677324269,0.930135779001631,0.804820204198858,0.583826711835847,0.822799249567402,0.492502392237286,0.243206428637567,0,0,0.268412837520744,5.04695876553905,3.70456604565424,0.330418782983798,2.3800550999719,0.853153002140936,0.696710015581316,1.54640953586512,1.21010114774006,2.2237804384487,1.14135375667535,2.84717436926707,1.4822905925161,2.26201687920243,1.39269530428806,1.9496408711912,0.898819408654221,1.72910439899755,2.58883655230677,0.189667900953082,0.456994050438915,1.1270773567308,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0.123397163921801,0,6.34011401721157,7.86235980452812,5.17182858485164,5.88294352026658,4.10001171579109,3.05551022137704,1.43848068725405,2.91843408195064,1.09824565275233,0,0.372140947668503,0.624075346229121,0.252578877947112,0.179397413521912,0,1.66277871149944,0.568474235311454,0.651859905768103,0.169745085775188,0.938760993154008,1.34005005953453,1.6663054862021,0.195133647857799,0.472905432318573,0,0.797273843287435,1.3109065177259,1.03610989119537,0.723245292907558,0,0.54390568381871,1.96705709207614,1.65562047782839,1.76605648986571,1.52375192569864,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0,0,11.8888887076069,0.425820255624806,0.178065603667255,0.325773918707152,0.494910368917606,1.32745138339963,0.485561272309963,0.302323556964751,1.88605079755898,1.18120757152309,1.84461088766356,1.29214146584111,1.09060118843252,0.712994756769443,0.948110273807448,1.05418608574999,2.06271086496374,0.680879211507576,0.18006109403131,0.646793418913773,1.92903331528433,1.06404140185364,0,0.493647061806363,0.304464949114599,0,0,0.220528398054962,12.5313552235525,10.4951877352339,6.27254419252821,5.252383136138,4.76008609260678,1.7488850197791,1.29797711407357,18.6249260069659,0.82554747185289,4.07427960213366,6.2161590811548,13.2593400889394,11.6676868335327,8.32894306969891,10.636310376598,8.153798454461,1.90934123603023,0.632671987162271,2.23651413839534,1.72808545314882,2.09088296014469,2.40198820120795,1.48350781023303,1.48776220305605,1.30877970992015,1.42576470620972,4.97071450469541,0,0.149516546043979,0.496375471371293,0.388902376688095,0.129159823477731,0.337912250981556,0.117357238645754,0.39061315453185,0.104859344425711,0,0,0.948033361884535,1.62180172232131,1.54066435747241,1.42912905275575,1.07416017400489,0.79472541912506,1.20195449519969,0.590758108698309,0.706765149637033,0.762068066549998,0.302478555410522,0.38983152295901,0.962118416403295,0.350630706544707,4.30787728868902,0,0,0,0,0,0.549454872801795,3.85863082342319,0.501572104035363,7.34177395402186,5.9842280745933,6.87474616127276,6.70227411140382,6.16574267793578,4.5323633843382,4.72515750162264,10.3573876741571,8.60970577069989,6.21312374102184,0.415149390336707,1.19707462020309,2.04880326904961,4.86213434136588,2.93458427679175,2.75765262675021,2.44471400581777,2.88449080134452,0.64183841918363,2.27427490587418,2.02783439912192,2.26351609663291,2.62196220915671,2.17685518176556,2.1825478203133,1.90517476513229,1.97003354106254,1.92909220463705,2.47251540481984,3.53277408322554,1.71434626192708,2.8396128985494,0.953744759789284,2.76158191601424,1.97629698872194,1.26921911837515,1.09756783723664,2.63069711437843,2.98769050460896,5.61142271657738,2.01679530811096,1.67457620038458,2.04615521584845,1.08455788830176,3.2794123866794,3.74715866906919,1.87145286756327,3.22306581072447,2.10417165275728,1.98532277207564,0.695603506861264
|short_description=p5@Bcl11a
}}

Revision as of 19:18, 12 September 2013

Short description:p5@Bcl11a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Bcl11a_5end
Coexpression cluster:MCL_coexpression_mm9:18
Association with transcript: -443bp_to_ENSMUST00000000881, NM_001159289, NM_001242934, NM_016707, uc007ifs.2, uc007ift.2, uc007ifu.2, uc007ifv.2_5end
EntrezGene:Bcl11a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Bcl11a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A19.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.31
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A232.65
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A432.08
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A622.07
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A227.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.92
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.86
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.78
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.31
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H977.16
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A65.30
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.91
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.80
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F19.93
cortex, adult.CNhs10473.12-14D56.78
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B57.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G13.70
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F86.34
liver, embryo E13.CNhs10524.378-3H67.86
liver, embryo E14.CNhs10594.409-16E15.17
liver, embryo E15.CNhs10520.433-16D75.88
liver, embryo E16.CNhs10523.462-17F54.10
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I911.89
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C312.53
skin, neonate N00.CNhs11124.650-25G410.50
skin, neonate N03.CNhs11215.662-22H36.27
skin, neonate N06.CNhs11097.693-20I55.25
skin, neonate N10.CNhs11108.762-6C44.76
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G218.62
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F24.07
spleen, neonate N10.CNhs11116.752-24D16.22
spleen, neonate N20.CNhs11112.824-19H113.26
spleen, neonate N25.CNhs11099.1354-25G311.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.33
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.15
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D53.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter3.84e-1134
brain grey matter3.33e-1029
regional part of telencephalon3.33e-1029
telencephalon3.33e-1029
cerebral cortex6.69e-1021
cerebral hemisphere6.69e-1021
pallium6.69e-1021
regional part of cerebral cortex1.98e-0717
anterior neural tube2.57e-0740
regional part of forebrain5.16e-0739
forebrain5.16e-0739
future forebrain5.16e-0739
regional part of nervous system5.32e-0754
occipital lobe8.47e-0710
visual cortex8.47e-0710
neocortex8.47e-0710







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:23977565..23977612,%2B&oldid=2888203"