FFCP PHASE1:Mm9::chr17:35258935..35258984,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13001|HGNC=|MCL_coexpression_id=0|UniProt=G3UWU5|association_with_transcript=0bp_to_ENSMUST00000173915_5end|description=CAGE_peak_2_at_Csnk2b_5end|id=chr17:35258935..35258984,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,2.93e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001301,6.29e-10,3;UBERON:0006555,6.29e-10,3;UBERON:0005103,6.29e-10,3;UBERON:0000083,6.29e-10,3;UBERON:0009201,6.29e-10,3;UBERON:0004819,6.29e-10,3;UBERON:0006553,6.29e-10,3;UBERON:0003074,6.29e-10,3;UBERON:0003060,6.29e-10,3;UBERON:0003135,9.33e-10,15;UBERON:0003101,4.36e-09,16;UBERON:0000079,4.36e-09,16;UBERON:0000473,8.31e-08,14;UBERON:0000080,1.50e-07,4;UBERON:0005904,1.50e-07,4;UBERON:0006947,1.50e-07,4;UBERON:0002120,1.50e-07,4;UBERON:0004054,1.50e-07,4;UBERON:0004875,1.50e-07,4;UBERON:0004876,1.50e-07,4;UBERON:0005721,1.50e-07,4;UBERON:0005754,1.50e-07,4;UBERON:0007297,1.50e-07,4;UBERON:0001343,5.30e-07,2;UBERON:0004910,5.30e-07,2;UBERON:0004909,5.30e-07,2;UBERON:0005154,5.30e-07,2;UBERON:0005295,5.30e-07,2;UBERON:0005297,5.30e-07,2;UBERON:0005294,5.30e-07,2;UBERON:0010141,5.30e-07,2;UBERON:0005891,5.30e-07,2|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0,1.39912375625629,0.473193248037357,0.274228867211478,0,306.751147574909,1.09220046320974,0.522399578277871,0.159992422793407,0.68822784320151,0.57423196411502,0,0,0.190023419456374,0,0,1.90509202037889,0.61506478758457,0,0,0,0,0.418531630736908,0,1.0470474879476,0,0,0,0,0.202753862439029,0.367093504323363,0,0,0,0,0.139986421625363,0,1.34226084846189,0,0.672187598284928,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0.622137673850866,0.135005938331691,0.420649922702764,0.285650984403804,0.220868540951614,0.489963196859816,0.191690942036473,0,0,0.255374676170375,0.153606533256243,0.395658863190582,0.274462930807229,0.52091337055676,0,0,0,0,0.284743361598206,0.372798891650601,0.151452386666368,0,0,0,0,0,0,0,28.3697728666139,0.340860645156116,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,39.2792546233566,0,0,0.346970653532272,0,0,0.301445281105245,0.705532242814229,0,0,0,0.884610551949874,0.485300549842228,0.441683036920787,0,0,0,0.41889341362691,0,1.7972268675888,2.99951365496704,3.30382590389968,0,0,0.628271760564322,0.347648640384553,0.255715457330331,0.20778804455956,0.486723789203273,1.12023300235348,1.99051152976149,2.27450482590307,0.420883711772948,0,0,0.360124259610698,0.452114453507145,0.680364991513279,0.768682321709099,0.0937017245597288,0,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,1.28673953557358,1.70498099637356,0.207125772535502,0,0,0.23674473558521,0.590292695242212,0.154267112887378,0,0,1.16765342367169,0.16455984991348,0,0.486412857275134,0.730999937126662,0,0.671032093801859,0,0.823236899034275,0,0,0.213288250535234,0.464473343720877,0,0,0,0.190225626112559,0,0.494096864172033,0,0.397912944082302,0,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0.631222379012867,0.189709611372772,0,0.156998727841375,0,0,0.500535317148282,0,0,0.405720242777006,0,0,0,0.648540907100142,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0.433947175744535,0,0,0,0,0,0.468846746368813,0.163934945376675,0.757412781613119,0.315508219416257,0.390438744296638,0.861693590931196,0,0.445597348164788,0.566153061577665,1.21443210502468,0,0,0,0.141940085208269,0.534196811001766,0.651547837414304,0.164970122972535,0,0.728341908464944,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0.646793418913773,0.643011105094777,0.886701168211368,0.713475270408282,0.164549020602121,3.04464949114599,0,0,0,0.16488625294148,0.807322133479528,0.301564624640779,0.119372344003136,0,0,0.18542530201051,0,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,2.20971958992012,2.51912614182584,1.93479963326193,0,0.158167996790568,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0.129614973291793,0,1903.59105393651,0.149516546043979,0.330916980914195,0.194451188344048,0.645799117388655,0.168956125490778,1.05621514781179,0.2604087696879,0.943734099831398,365.516774809747,809.940377597118,0,0.202725215290164,0.410843828659309,0.77952493786677,0.358053391334963,0.198681354781265,0.841368146639782,0.738447635872886,1.00966449948148,1.295515713135,1.00826185136841,0.38983152295901,0.481059208201647,0.584384510907845,0.906921534460845,0,0.717710852875806,0,0,0.187682475451182,0.183151624267265,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0.62272408550506,0,0.341467211508268,0.729320151204882,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0.505394423527595,0,0.1886263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| ||
|EntrezGene=13001 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=G3UWU5 | |||
|association_with_transcript=0bp_to_ENSMUST00000173915_5end | |||
|description=CAGE_peak_2_at_Csnk2b_5end | |||
|id=chr17:35258935..35258984,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,2.93e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,6.29e-10,3;UBERON:0006555,6.29e-10,3;UBERON:0005103,6.29e-10,3;UBERON:0000083,6.29e-10,3;UBERON:0009201,6.29e-10,3;UBERON:0004819,6.29e-10,3;UBERON:0006553,6.29e-10,3;UBERON:0003074,6.29e-10,3;UBERON:0003060,6.29e-10,3;UBERON:0003135,9.33e-10,15;UBERON:0003101,4.36e-09,16;UBERON:0000079,4.36e-09,16;UBERON:0000473,8.31e-08,14;UBERON:0000080,1.50e-07,4;UBERON:0005904,1.50e-07,4;UBERON:0006947,1.50e-07,4;UBERON:0002120,1.50e-07,4;UBERON:0004054,1.50e-07,4;UBERON:0004875,1.50e-07,4;UBERON:0004876,1.50e-07,4;UBERON:0005721,1.50e-07,4;UBERON:0005754,1.50e-07,4;UBERON:0007297,1.50e-07,4;UBERON:0001343,5.30e-07,2;UBERON:0004910,5.30e-07,2;UBERON:0004909,5.30e-07,2;UBERON:0005154,5.30e-07,2;UBERON:0005295,5.30e-07,2;UBERON:0005297,5.30e-07,2;UBERON:0005294,5.30e-07,2;UBERON:0010141,5.30e-07,2;UBERON:0005891,5.30e-07,2 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0,1.39912375625629,0.473193248037357,0.274228867211478,0,306.751147574909,1.09220046320974,0.522399578277871,0.159992422793407,0.68822784320151,0.57423196411502,0,0,0.190023419456374,0,0,1.90509202037889,0.61506478758457,0,0,0,0,0.418531630736908,0,1.0470474879476,0,0,0,0,0.202753862439029,0.367093504323363,0,0,0,0,0.139986421625363,0,1.34226084846189,0,0.672187598284928,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0.622137673850866,0.135005938331691,0.420649922702764,0.285650984403804,0.220868540951614,0.489963196859816,0.191690942036473,0,0,0.255374676170375,0.153606533256243,0.395658863190582,0.274462930807229,0.52091337055676,0,0,0,0,0.284743361598206,0.372798891650601,0.151452386666368,0,0,0,0,0,0,0,28.3697728666139,0.340860645156116,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,39.2792546233566,0,0,0.346970653532272,0,0,0.301445281105245,0.705532242814229,0,0,0,0.884610551949874,0.485300549842228,0.441683036920787,0,0,0,0.41889341362691,0,1.7972268675888,2.99951365496704,3.30382590389968,0,0,0.628271760564322,0.347648640384553,0.255715457330331,0.20778804455956,0.486723789203273,1.12023300235348,1.99051152976149,2.27450482590307,0.420883711772948,0,0,0.360124259610698,0.452114453507145,0.680364991513279,0.768682321709099,0.0937017245597288,0,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,1.28673953557358,1.70498099637356,0.207125772535502,0,0,0.23674473558521,0.590292695242212,0.154267112887378,0,0,1.16765342367169,0.16455984991348,0,0.486412857275134,0.730999937126662,0,0.671032093801859,0,0.823236899034275,0,0,0.213288250535234,0.464473343720877,0,0,0,0.190225626112559,0,0.494096864172033,0,0.397912944082302,0,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0.631222379012867,0.189709611372772,0,0.156998727841375,0,0,0.500535317148282,0,0,0.405720242777006,0,0,0,0.648540907100142,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0.433947175744535,0,0,0,0,0,0.468846746368813,0.163934945376675,0.757412781613119,0.315508219416257,0.390438744296638,0.861693590931196,0,0.445597348164788,0.566153061577665,1.21443210502468,0,0,0,0.141940085208269,0.534196811001766,0.651547837414304,0.164970122972535,0,0.728341908464944,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0.646793418913773,0.643011105094777,0.886701168211368,0.713475270408282,0.164549020602121,3.04464949114599,0,0,0,0.16488625294148,0.807322133479528,0.301564624640779,0.119372344003136,0,0,0.18542530201051,0,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,2.20971958992012,2.51912614182584,1.93479963326193,0,0.158167996790568,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0.129614973291793,0,1903.59105393651,0.149516546043979,0.330916980914195,0.194451188344048,0.645799117388655,0.168956125490778,1.05621514781179,0.2604087696879,0.943734099831398,365.516774809747,809.940377597118,0,0.202725215290164,0.410843828659309,0.77952493786677,0.358053391334963,0.198681354781265,0.841368146639782,0.738447635872886,1.00966449948148,1.295515713135,1.00826185136841,0.38983152295901,0.481059208201647,0.584384510907845,0.906921534460845,0,0.717710852875806,0,0,0.187682475451182,0.183151624267265,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0.62272408550506,0,0.341467211508268,0.729320151204882,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0.505394423527595,0,0.188626341386076,0.187283014939765,0,0.229741875822453,0.476293691283074,0,0,0,0,0.685738504770831,0.354951612318675,0,0,0,0.169229215783353,0,0.789209134313529,0.407412341537585,0,0.118635018124174,0,0,0,0.578719832943424,0.249810577937946,0.233931608445408,0.644613162144895,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Csnk2b | |||
}} |
Revision as of 14:21, 13 September 2013
Short description: | p2@Csnk2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Csnk2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000173915_5end |
EntrezGene: | Csnk2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 2.93e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
epididymis | 6.29e-10 | 3 |
excretory tube | 6.29e-10 | 3 |
mesonephric epithelium | 6.29e-10 | 3 |
mesonephric tubule | 6.29e-10 | 3 |
nephric duct | 6.29e-10 | 3 |
kidney epithelium | 6.29e-10 | 3 |
renal duct | 6.29e-10 | 3 |
mesonephric duct | 6.29e-10 | 3 |
pronephric duct | 6.29e-10 | 3 |
male reproductive organ | 9.33e-10 | 15 |
male organism | 4.36e-09 | 16 |
male reproductive system | 4.36e-09 | 16 |
testis | 8.31e-08 | 14 |
mesonephros | 1.50e-07 | 4 |
duct of male reproductive system | 1.50e-07 | 4 |
male genital duct | 1.50e-07 | 4 |
pronephros | 1.50e-07 | 4 |
internal male genitalia | 1.50e-07 | 4 |
nephrogenic cord | 1.50e-07 | 4 |
urogenital ridge | 1.50e-07 | 4 |
pronephric mesoderm | 1.50e-07 | 4 |
rostral part of nephrogenic cord | 1.50e-07 | 4 |
presumptive pronephric mesoderm | 1.50e-07 | 4 |
seminiferous tubule of testis | 5.30e-07 | 2 |
epithelium of male gonad | 5.30e-07 | 2 |
epithelium of gonad | 5.30e-07 | 2 |
epithelial cord | 5.30e-07 | 2 |
sex cord | 5.30e-07 | 2 |
testis sex cord | 5.30e-07 | 2 |
genital ridge | 5.30e-07 | 2 |
primitive sex cord of indifferent gonad | 5.30e-07 | 2 |
coelomic epithelium | 5.30e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.