FFCP PHASE1:Mm9::chr7:35597696..35597712,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68947|HGNC=|UniProt=Q8BQ86|association_with_transcript=0bp_to_ENSMUST00000078686_5end|description=CAGE_peak_1_at_Chst8_5end|id=chr7:35597696..35597712,-|ontology_enrichment_celltype=CL:0000221!8.30e-15!44;CL:0000133!8.30e-15!44;CL:0002319!3.45e-14!43;CL:0000540!8.24e-12!33;CL:0000047!8.24e-12!33;CL:0000031!8.24e-12!33;CL:0000404!8.24e-12!33;CL:0000055!1.31e-09!50;CL:0000117!6.77e-08!23;CL:0000337!6.77e-08!23;CL:0000393!1.18e-07!39;CL:0000211!1.18e-07!39;CL:0002321!2.51e-07!70;CL:0000220!2.51e-07!70|ontology_enrichment_celltype_v019_2=CL:0000221,4.78e-15,44;CL:0000133,4.78e-15,44;CL:0002319,2.09e-14,43;CL:0000540,6.31e-12,33;CL:0000047,6.31e-12,33;CL:0000031,6.31e-12,33;CL:0000404,6.31e-12,33;CL:0000117,7.15e-08,23;CL:0000337,7.15e-08,23;CL:0002321,7.79e-08,70;CL:0000393,7.84e-08,39;CL:0000211,7.84e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!8.52e-24!75;UBERON:0001016!8.52e-24!75;UBERON:0001017!3.91e-23!73;UBERON:0005743!3.91e-23!73;UBERON:0004121!2.70e-20!102;UBERON:0000924!2.70e-20!102;UBERON:0006601!2.70e-20!102;UBERON:0002346!1.17e-14!71;UBERON:0003075!1.17e-14!71;UBERON:0007284!1.17e-14!71;UBERON:0000955!3.21e-14!50;UBERON:0006238!3.21e-14!50;UBERON:0001049!5.27e-14!52;UBERON:0005068!5.27e-14!52;UBERON:0006241!5.27e-14!52;UBERON:0007135!5.27e-14!52;UBERON:0002616!7.50e-14!49;UBERON:0000033!1.65e-11!63;UBERON:0003080!7.19e-10!40;UBERON:0002020!1.27e-09!34;UBERON:0002780!1.53e-09!39;UBERON:0001890!1.53e-09!39;UBERON:0006240!1.53e-09!39;UBERON:0002791!2.36e-08!29;UBERON:0003528!2.36e-08!29;UBERON:0001893!2.36e-08!29;UBERON:0003056!1.44e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.75e-24,75;UBERON:0001017,2.79e-23,73;UBERON:0004121,5.10e-17,95;UBERON:0000924,5.10e-17,95;UBERON:0006601,5.10e-17,95;UBERON:0000073,3.71e-15,54;UBERON:0001049,7.18e-14,52;UBERON:0005068,7.18e-14,52;UBERON:0006241,7.18e-14,52;UBERON:0007135,7.18e-14,52;UBERON:0000955,2.46e-12,47;UBERON:0006238,2.46e-12,47;UBERON:0002346,3.58e-12,64;UBERON:0003075,3.58e-12,64;UBERON:0007284,3.58e-12,64;UBERON:0002616,5.75e-12,46;UBERON:0010371,5.20e-10,73;UBERON:0003080,1.28e-09,40;UBERON:0002020,1.47e-09,34;UBERON:0002780,2.77e-09,39;UBERON:0001890,2.77e-09,39;UBERON:0006240,2.77e-09,39;UBERON:0003528,3.03e-08,29;UBERON:0002791,3.03e-08,29;UBERON:0001893,3.03e-08,29;UBERON:0003056,4.46e-07,49;UBERON:0010314,6.68e-07,92|phase1_expression=5.92550734287738,33.850614541018,41.4049307844478,6.0492842261366,9.01612313903425,24.8461322429597,16.5864974822823,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,8.24919914465377,0,0,19.0390983124154,19.2703796096423,26.4146703492909,30.5841017272943,27.5803177837938,3.99049180858385,2.26827116783938,11.0865255327652,0,0,0,0.866554859253824,0.664938581433969,3.06254034393554,0,0,0,0,0,0,0,0,0,7.04152209913235,3.05235218932625,9.88587822305123,6.61061656852564,1.53985063787899,2.87505128729943,0,0,0,0.514518872071894,0.573066879877513,1.03134418455488,11.7343547298567,9.52183762689659,11.4089652631112,1.35537812827653,1.77858959222228,2.6996991518442,1.97773272513395,0,11.6844043102178,13.4476406862544,8.39885859698669,7.56033254657468,9.04397333810943,6.28432165688368,5.30084498283872,1.34739879136449,1.72521847832825,0.919218786610021,16.5173821499083,25.6651549551227,16.1286859919056,10.2871304429551,7.95942499340964,7.29278718779464,13.959149950069,14.069065250792,14.3630352910202,5.00868595305235,4.9830088279686,10.6247684120421,4.7707501799906,8.38844317185319,18.2614627882057,0.860423876981386,0,0,0.649776417447669,0.448026887097336,1.68533304158102,0,0,0,21.5490432258321,0,0,0,0,0,0,1.48439043634778,1.29468941823586,18.7037095221679,3.99016251562112,5.1759131313064,5.76538743140146,5.27529241934179,5.17390311397101,8.67099480174761,9.88779870937496,1.59059292611903,0,0.485300549842228,1.10420759230197,0.969750506270444,3.72783522436244,16.3957246326466,9.84399522023239,1.78819938646014,0.11981512450592,0,0,8.08869452786043,3.66000482254901,0.502617408451458,6.60532416730651,5.8814555185976,18.90871205492,14.6017136760982,0.407357455401265,0.870848794270651,0.758168275301024,0.210441855886474,1.43132487258974,3.44853156650209,2.70093194708024,1.05493372485001,1.42876648217788,0.768682321709099,1.12442069471675,0.517406741478031,1.72454394346274,2.08016688184601,0.351902248327898,0.219195732427575,0.556094498451196,0.348252166522167,1.23469281844766,1.19420560091096,0,0,0,1.03562886267751,1.40715635988658,0,0,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0.584799949701329,0,0,12.4071069652835,9.57012895127345,1.32167513193519,0.264450566663544,0.639864751605702,0.232236671860439,2.96395161040815,4.03367049246685,1.77902435075896,1.90225626112559,2.84717436926707,1.97638745668813,0.754005626400808,2.18852119245266,1.9496408711912,1.79763881730844,0.432276099749388,2.98711909881551,5.69003702859245,6.96915926919346,9.01661885384643,8.96065842519383,7.95205197387266,7.64480436804472,6.89278254654404,7.6757276949393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| ||
|EntrezGene=68947 | |||
|HGNC= | |||
|UniProt=Q8BQ86 | |||
|association_with_transcript=0bp_to_ENSMUST00000078686_5end | |||
|description=CAGE_peak_1_at_Chst8_5end | |||
|id=chr7:35597696..35597712,- | |||
|ontology_enrichment_celltype=CL:0000221!8.30e-15!44;CL:0000133!8.30e-15!44;CL:0002319!3.45e-14!43;CL:0000540!8.24e-12!33;CL:0000047!8.24e-12!33;CL:0000031!8.24e-12!33;CL:0000404!8.24e-12!33;CL:0000055!1.31e-09!50;CL:0000117!6.77e-08!23;CL:0000337!6.77e-08!23;CL:0000393!1.18e-07!39;CL:0000211!1.18e-07!39;CL:0002321!2.51e-07!70;CL:0000220!2.51e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.78e-15,44;CL:0000133,4.78e-15,44;CL:0002319,2.09e-14,43;CL:0000540,6.31e-12,33;CL:0000047,6.31e-12,33;CL:0000031,6.31e-12,33;CL:0000404,6.31e-12,33;CL:0000117,7.15e-08,23;CL:0000337,7.15e-08,23;CL:0002321,7.79e-08,70;CL:0000393,7.84e-08,39;CL:0000211,7.84e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.52e-24!75;UBERON:0001016!8.52e-24!75;UBERON:0001017!3.91e-23!73;UBERON:0005743!3.91e-23!73;UBERON:0004121!2.70e-20!102;UBERON:0000924!2.70e-20!102;UBERON:0006601!2.70e-20!102;UBERON:0002346!1.17e-14!71;UBERON:0003075!1.17e-14!71;UBERON:0007284!1.17e-14!71;UBERON:0000955!3.21e-14!50;UBERON:0006238!3.21e-14!50;UBERON:0001049!5.27e-14!52;UBERON:0005068!5.27e-14!52;UBERON:0006241!5.27e-14!52;UBERON:0007135!5.27e-14!52;UBERON:0002616!7.50e-14!49;UBERON:0000033!1.65e-11!63;UBERON:0003080!7.19e-10!40;UBERON:0002020!1.27e-09!34;UBERON:0002780!1.53e-09!39;UBERON:0001890!1.53e-09!39;UBERON:0006240!1.53e-09!39;UBERON:0002791!2.36e-08!29;UBERON:0003528!2.36e-08!29;UBERON:0001893!2.36e-08!29;UBERON:0003056!1.44e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.75e-24,75;UBERON:0001017,2.79e-23,73;UBERON:0004121,5.10e-17,95;UBERON:0000924,5.10e-17,95;UBERON:0006601,5.10e-17,95;UBERON:0000073,3.71e-15,54;UBERON:0001049,7.18e-14,52;UBERON:0005068,7.18e-14,52;UBERON:0006241,7.18e-14,52;UBERON:0007135,7.18e-14,52;UBERON:0000955,2.46e-12,47;UBERON:0006238,2.46e-12,47;UBERON:0002346,3.58e-12,64;UBERON:0003075,3.58e-12,64;UBERON:0007284,3.58e-12,64;UBERON:0002616,5.75e-12,46;UBERON:0010371,5.20e-10,73;UBERON:0003080,1.28e-09,40;UBERON:0002020,1.47e-09,34;UBERON:0002780,2.77e-09,39;UBERON:0001890,2.77e-09,39;UBERON:0006240,2.77e-09,39;UBERON:0003528,3.03e-08,29;UBERON:0002791,3.03e-08,29;UBERON:0001893,3.03e-08,29;UBERON:0003056,4.46e-07,49;UBERON:0010314,6.68e-07,92 | |||
|phase1_expression=5.92550734287738,33.850614541018,41.4049307844478,6.0492842261366,9.01612313903425,24.8461322429597,16.5864974822823,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,8.24919914465377,0,0,19.0390983124154,19.2703796096423,26.4146703492909,30.5841017272943,27.5803177837938,3.99049180858385,2.26827116783938,11.0865255327652,0,0,0,0.866554859253824,0.664938581433969,3.06254034393554,0,0,0,0,0,0,0,0,0,7.04152209913235,3.05235218932625,9.88587822305123,6.61061656852564,1.53985063787899,2.87505128729943,0,0,0,0.514518872071894,0.573066879877513,1.03134418455488,11.7343547298567,9.52183762689659,11.4089652631112,1.35537812827653,1.77858959222228,2.6996991518442,1.97773272513395,0,11.6844043102178,13.4476406862544,8.39885859698669,7.56033254657468,9.04397333810943,6.28432165688368,5.30084498283872,1.34739879136449,1.72521847832825,0.919218786610021,16.5173821499083,25.6651549551227,16.1286859919056,10.2871304429551,7.95942499340964,7.29278718779464,13.959149950069,14.069065250792,14.3630352910202,5.00868595305235,4.9830088279686,10.6247684120421,4.7707501799906,8.38844317185319,18.2614627882057,0.860423876981386,0,0,0.649776417447669,0.448026887097336,1.68533304158102,0,0,0,21.5490432258321,0,0,0,0,0,0,1.48439043634778,1.29468941823586,18.7037095221679,3.99016251562112,5.1759131313064,5.76538743140146,5.27529241934179,5.17390311397101,8.67099480174761,9.88779870937496,1.59059292611903,0,0.485300549842228,1.10420759230197,0.969750506270444,3.72783522436244,16.3957246326466,9.84399522023239,1.78819938646014,0.11981512450592,0,0,8.08869452786043,3.66000482254901,0.502617408451458,6.60532416730651,5.8814555185976,18.90871205492,14.6017136760982,0.407357455401265,0.870848794270651,0.758168275301024,0.210441855886474,1.43132487258974,3.44853156650209,2.70093194708024,1.05493372485001,1.42876648217788,0.768682321709099,1.12442069471675,0.517406741478031,1.72454394346274,2.08016688184601,0.351902248327898,0.219195732427575,0.556094498451196,0.348252166522167,1.23469281844766,1.19420560091096,0,0,0,1.03562886267751,1.40715635988658,0,0,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0.584799949701329,0,0,12.4071069652835,9.57012895127345,1.32167513193519,0.264450566663544,0.639864751605702,0.232236671860439,2.96395161040815,4.03367049246685,1.77902435075896,1.90225626112559,2.84717436926707,1.97638745668813,0.754005626400808,2.18852119245266,1.9496408711912,1.79763881730844,0.432276099749388,2.98711909881551,5.69003702859245,6.96915926919346,9.01661885384643,8.96065842519383,7.95205197387266,7.64480436804472,6.89278254654404,7.67572769493931,6.27994911365499,8.51440431060424,0.296452627087149,1.33476084572875,0.982794975566015,0.674586337154561,0.608580364165509,0,0.763877555344259,1.15078454980324,0.324270453550071,0.549122826376163,1.43768206527355,1.11642284300551,1.24815069245824,0,0.179397413521912,0,5.35784251483154,1.89491411770485,0.651859905768103,1.01847051465113,1.64283173801951,3.51763140627813,6.66522194480839,4.48807390072937,4.41378403497335,5.75808193086815,5.10255259703959,8.02930242107116,2.93564469172023,2.31438493730419,0,0,0.491764273019036,0,12.0412942490844,11.0178985396671,0,0.757412781613119,9.14973836307144,10.9322848403059,9.26320610251035,6.21318874676635,20.4974780155803,32.2707245099269,4.45291771842384,8.76767573733936,9.88219444866309,8.35435422696698,25.5492153374884,0.890328018336276,0.325773918707152,1.15479086080775,3.98235415019888,2.42780636154981,1.81394134178851,0.377210159511796,1.18120757152309,1.22974059177571,2.06742634534577,1.81766864738753,1.78248689192361,2.21225730555071,2.10837217149998,0,30.6395645178409,1.26042765821917,1.94038025674132,0.857348140126369,1.24138163549592,4.45922044005176,5.75921572107423,12.178597964584,0.469343416127421,19.2767184486076,0,2.14352128823924,1.29171541356724,0.904693873922338,0.596861720015682,0.820704498725306,1.7488850197791,10.0129663085675,0.170870880797853,0.82554747185289,0.925972636848558,0.188368457004691,0.27338845544205,0.228778173206523,0,0.139951452323658,0,0.954670618015114,0.632671987162271,1.21991680276109,1.83609079397062,0.627264888043406,1.31017538247707,1.21377911746339,1.65306911450672,1.30877970992015,1.68499465279331,1.24267862617385,0,1.34564891439581,2.48187735685646,1.75006069509643,2.0665571756437,2.36538575687089,2.11243029562357,0.911430693907651,0.943734099831398,0.241584120826006,0.288030006257865,2.8441000856536,1.82452693761148,1.02710957164827,0.77952493786677,1.61124026100733,0.993406773906324,1.9231271923195,2.36303243479324,1.9183625490148,0.990688486514998,0.705783295957884,2.82627854145282,1.44317762460494,1.63627663054197,0.453460767230423,3.7737612073591,2.42227412845584,4.7007692581942,0.965947970160952,45.6068415346372,26.1906822702189,9.00347192132076,1.00314420807073,9.60078132449013,6.44455331110048,9.16632821503035,6.35856774671644,6.16574267793578,8.3093328712867,9.45031500324528,6.30449684513909,9.06284817968409,9.83744592328458,4.04770655578289,4.78829848081237,4.43907374960749,1.21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| |||
|short_description=p1@Chst8 | |||
}} |
Revision as of 13:22, 14 September 2013
Short description: | p1@Chst8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Chst8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000078686_5end |
EntrezGene: | Chst8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.78e-15 | 44 |
neurectodermal cell | 4.78e-15 | 44 |
neural cell | 2.09e-14 | 43 |
neuron | 6.31e-12 | 33 |
neuronal stem cell | 6.31e-12 | 33 |
neuroblast | 6.31e-12 | 33 |
electrically signaling cell | 6.31e-12 | 33 |
CNS neuron (sensu Vertebrata) | 7.15e-08 | 23 |
neuroblast (sensu Vertebrata) | 7.15e-08 | 23 |
embryonic cell | 7.79e-08 | 70 |
electrically responsive cell | 7.84e-08 | 39 |
electrically active cell | 7.84e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.75e-24 | 75 |
central nervous system | 2.79e-23 | 73 |
ectoderm-derived structure | 5.10e-17 | 95 |
ectoderm | 5.10e-17 | 95 |
presumptive ectoderm | 5.10e-17 | 95 |
regional part of nervous system | 3.71e-15 | 54 |
neural tube | 7.18e-14 | 52 |
neural rod | 7.18e-14 | 52 |
future spinal cord | 7.18e-14 | 52 |
neural keel | 7.18e-14 | 52 |
brain | 2.46e-12 | 47 |
future brain | 2.46e-12 | 47 |
neurectoderm | 3.58e-12 | 64 |
neural plate | 3.58e-12 | 64 |
presumptive neural plate | 3.58e-12 | 64 |
regional part of brain | 5.75e-12 | 46 |
ecto-epithelium | 5.20e-10 | 73 |
anterior neural tube | 1.28e-09 | 40 |
gray matter | 1.47e-09 | 34 |
regional part of forebrain | 2.77e-09 | 39 |
forebrain | 2.77e-09 | 39 |
future forebrain | 2.77e-09 | 39 |
brain grey matter | 3.03e-08 | 29 |
regional part of telencephalon | 3.03e-08 | 29 |
telencephalon | 3.03e-08 | 29 |
pre-chordal neural plate | 4.46e-07 | 49 |
structure with developmental contribution from neural crest | 6.68e-07 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.