FFCP PHASE1:Hg19::chr5:17404114..17404134,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=S | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000508677_5end | |association_with_transcript=0bp_to_ENST00000508677_5end | ||
Revision as of 22:57, 9 July 2013
| Short description: | p1@ENST00000508677 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_ENST00000508677_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | 0bp_to_ENST00000508677_5end |
| EntrezGene: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@ENST00000508677 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| regional part of cerebral cortex | 1.21e-124 | 22 |
| neocortex | 2.55e-112 | 20 |
| cerebral cortex | 8.08e-110 | 25 |
| pallium | 8.08e-110 | 25 |
| cerebral hemisphere | 2.94e-103 | 32 |
| telencephalon | 4.02e-97 | 34 |
| regional part of telencephalon | 3.74e-94 | 32 |
| brain grey matter | 1.52e-88 | 34 |
| gray matter | 1.52e-88 | 34 |
| regional part of forebrain | 3.03e-80 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
