FFCP PHASE1:Hg19::chr1:26317408..26317429,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5051|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=8579|TSSclassifier=S|UniProt=|association_with_transcript=-101bp_to_DQ892796,DQ896043_5end|coexpression_cluster_id=C28|description=CAGE_peak_5_at_PAFAH2_5end|id=chr1:26317408..26317429,-|ontology_enrichment_celltype=CL:0000791!2.58e-26!18;CL:0000789!2.58e-26!18;CL:0002420!2.58e-26!18;CL:0002419!2.58e-26!18;CL:0000790!2.58e-26!18;CL:0000084!1.08e-20!25;CL:0000827!1.08e-20!25;CL:0000625!9.37e-17!11;CL:0000738!1.17e-16!140;CL:0000037!2.82e-13!172;CL:0000566!2.82e-13!172;CL:0002274!2.35e-12!5;CL:0000457!2.35e-12!5;CL:0002191!2.35e-12!5;CL:0000097!2.35e-12!5;CL:0000831!2.35e-12!5;CL:0002028!2.35e-12!5;CL:0000988!5.84e-12!182;CL:0000838!8.20e-12!52;CL:0000542!1.70e-11!53;CL:0000051!1.70e-11!53;CL:0002031!5.24e-10!124;CL:0000624!1.66e-09!6;CL:0000784!5.14e-09!3;CL:0002032!5.29e-09!165;CL:0000837!5.29e-09!165;CL:0002087!6.82e-09!119;CL:0000767!2.15e-08!3;CL:0000623!2.37e-08!3;CL:0000825!2.37e-08!3;CL:0000842!8.85e-08!3;CL:0000898!1.82e-07!3|ontology_enrichment_celltype_v019=CL:0000784;1.91e-27;3!CL:0000625;1.02e-12;11!CL:0000767;1.63e-12;3!CL:0000084;1.56e-08;25!CL:0000451;6.99e-08;10!CL:0000791;7.72e-08;18!CL:0000789;7.72e-08;18!CL:0002419;7.72e-08;18!CL:0000097;9.54e-08;5|ontology_enrichment_celltype_v019_2=CL:0000784,1.91e-27,3;CL:0000625,7.87e-13,11;CL:0000767,1.78e-12,3;CL:0000738,4.84e-10,136;CL:0000084,1.37e-08,25;CL:0000827,1.37e-08,25;CL:0000791,6.61e-08,18;CL:0000789,6.61e-08,18;CL:0002420,6.61e-08,18;CL:0002419,6.61e-08,18;CL:0000790,6.61e-08,18;CL:0000451,6.99e-08,10;CL:0000037,1.10e-07,168;CL:0000097,1.13e-07,5;CL:0002028,1.13e-07,5;CL:0000988,3.58e-07,177|ontology_enrichment_development_v019=CL:0000790;7.72e-08;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!3.09e-10!4;UBERON:0005058!3.09e-10!4;UBERON:0009113!3.09e-10!4;UBERON:0003295!3.09e-10!4;UBERON:0005562!3.09e-10!4;UBERON:0004177!2.13e-08!7;UBERON:0002193!3.37e-07!112;UBERON:0003351!8.53e-07!6|ontology_enrichment_uberon_v019=UBERON:0002370;3.13e-19;2!UBERON:0005058;3.13e-19;2!UBERON:0009113;3.13e-19;2!UBERON:0004177;3.13e-08;5!UBERON:0005057;3.13e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.45e-10,4;UBERON:0005058,4.45e-10,4;UBERON:0009113,4.45e-10,4;UBERON:0003295,4.45e-10,4;UBERON:0005562,4.45e-10,4;UBERON:0003351,5.42e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,2.30297638858328,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0.205601498999509,2.17342444007882,0.32592226663359,0.473447805734733,0,1.11410456885174,0.294605907474837,0.443067789167242,0.541607727530031,1.66518715643378,0.910415432919148,0.657751618414705,1.65810010671509,1.15921234294021,0.444859689486181,0.535081656179426,1.04535523804977,0.793165398882963,0.383220493601921,0.68725489096526,0.253019692019503,0.95569624297229,0.651083453856419,2.85135613334512,0.150575119077773,0.127986611154418,0,0.473554504088034,0,1.41124720257313,1.60464117470104,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,6.20075623193889,3.43196946468077,4.82894751728434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.27072508770766,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,1.40877494421162,0.414656231081544,0.288239906833923,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599837947092342,0,0,0,0,0,0,0,0,0,0.112085143993527,0.985153801009636,1.2937654491571,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0,4.5530779742985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.19024743058172,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.952257725854961,18.8599616721138,16.8843222884733,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0.122241444182866,0,0,3.8242020782295,0|short_description=p5@PAFAH2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5051 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8579 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-101bp_to_DQ892796,DQ896043_5end | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_5_at_PAFAH2_5end | |||
|id=chr1:26317408..26317429,- | |||
|ontology_enrichment_celltype=CL:0000791!2.58e-26!18;CL:0000789!2.58e-26!18;CL:0002420!2.58e-26!18;CL:0002419!2.58e-26!18;CL:0000790!2.58e-26!18;CL:0000084!1.08e-20!25;CL:0000827!1.08e-20!25;CL:0000625!9.37e-17!11;CL:0000738!1.17e-16!140;CL:0000037!2.82e-13!172;CL:0000566!2.82e-13!172;CL:0002274!2.35e-12!5;CL:0000457!2.35e-12!5;CL:0002191!2.35e-12!5;CL:0000097!2.35e-12!5;CL:0000831!2.35e-12!5;CL:0002028!2.35e-12!5;CL:0000988!5.84e-12!182;CL:0000838!8.20e-12!52;CL:0000542!1.70e-11!53;CL:0000051!1.70e-11!53;CL:0002031!5.24e-10!124;CL:0000624!1.66e-09!6;CL:0000784!5.14e-09!3;CL:0002032!5.29e-09!165;CL:0000837!5.29e-09!165;CL:0002087!6.82e-09!119;CL:0000767!2.15e-08!3;CL:0000623!2.37e-08!3;CL:0000825!2.37e-08!3;CL:0000842!8.85e-08!3;CL:0000898!1.82e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.91e-27;3!CL:0000625;1.02e-12;11!CL:0000767;1.63e-12;3!CL:0000084;1.56e-08;25!CL:0000451;6.99e-08;10!CL:0000791;7.72e-08;18!CL:0000789;7.72e-08;18!CL:0002419;7.72e-08;18!CL:0000097;9.54e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.91e-27,3;CL:0000625,7.87e-13,11;CL:0000767,1.78e-12,3;CL:0000738,4.84e-10,136;CL:0000084,1.37e-08,25;CL:0000827,1.37e-08,25;CL:0000791,6.61e-08,18;CL:0000789,6.61e-08,18;CL:0002420,6.61e-08,18;CL:0002419,6.61e-08,18;CL:0000790,6.61e-08,18;CL:0000451,6.99e-08,10;CL:0000037,1.10e-07,168;CL:0000097,1.13e-07,5;CL:0002028,1.13e-07,5;CL:0000988,3.58e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;7.72e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!3.09e-10!4;UBERON:0005058!3.09e-10!4;UBERON:0009113!3.09e-10!4;UBERON:0003295!3.09e-10!4;UBERON:0005562!3.09e-10!4;UBERON:0004177!2.13e-08!7;UBERON:0002193!3.37e-07!112;UBERON:0003351!8.53e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.13e-19;2!UBERON:0005058;3.13e-19;2!UBERON:0009113;3.13e-19;2!UBERON:0004177;3.13e-08;5!UBERON:0005057;3.13e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.45e-10,4;UBERON:0005058,4.45e-10,4;UBERON:0009113,4.45e-10,4;UBERON:0003295,4.45e-10,4;UBERON:0005562,4.45e-10,4;UBERON:0003351,5.42e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,2.30297638858328,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0.205601498999509,2.17342444007882,0.32592226663359,0.473447805734733,0,1.11410456885174,0.294605907474837,0.443067789167242,0.541607727530031,1.66518715643378,0.910415432919148,0.657751618414705,1.65810010671509,1.15921234294021,0.444859689486181,0.535081656179426,1.04535523804977,0.793165398882963,0.383220493601921,0.68725489096526,0.253019692019503,0.95569624297229,0.651083453856419,2.85135613334512,0.150575119077773,0.127986611154418,0,0.473554504088034,0,1.41124720257313,1.60464117470104,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,6.20075623193889,3.43196946468077,4.82894751728434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.27072508770766,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,1.40877494421162,0.414656231081544,0.288239906833923,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599837947092342,0,0,0,0,0,0,0,0,0,0.112085143993527,0.985153801009636,1.2937654491571,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0,4.5530779742985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.19024743058172,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.952257725854961,18.8599616721138,16.8843222884733,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0.122241444182866,0,0,3.8242020782295,0 | |||
|short_description=p5@PAFAH2 | |||
}} |
Revision as of 04:56, 12 September 2013
Short description: | p5@PAFAH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_PAFAH2_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -101bp_to_DQ892796, DQ896043_5end |
EntrezGene: | PAFAH2 |
HGNC: | 8579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.91e-27 | 3 |
CD8-positive, alpha-beta T cell | 7.87e-13 | 11 |
basophil | 1.78e-12 | 3 |
leukocyte | 4.84e-10 | 136 |
T cell | 1.37e-08 | 25 |
pro-T cell | 1.37e-08 | 25 |
mature alpha-beta T cell | 6.61e-08 | 18 |
alpha-beta T cell | 6.61e-08 | 18 |
immature T cell | 6.61e-08 | 18 |
mature T cell | 6.61e-08 | 18 |
immature alpha-beta T cell | 6.61e-08 | 18 |
dendritic cell | 6.99e-08 | 10 |
hematopoietic stem cell | 1.10e-07 | 168 |
mast cell | 1.13e-07 | 5 |
basophil mast progenitor cell | 1.13e-07 | 5 |
hematopoietic cell | 3.58e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.45e-10 | 4 |
hemolymphoid system gland | 4.45e-10 | 4 |
thymic region | 4.45e-10 | 4 |
pharyngeal gland | 4.45e-10 | 4 |
thymus primordium | 4.45e-10 | 4 |
pharyngeal epithelium | 5.42e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.