FFCP PHASE1:Hg19::chr1:43735678..43735691,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=128218|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28275|TSSclassifier=S|UniProt=|association_with_transcript=-4bp_to_ENST00000432792,uc001cir.2_5end|coexpression_cluster_id=C95|description=CAGE_peak_5_at_TMEM125_5end|id=chr1:43735678..43735691,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000322;2.79e-07;3|ontology_enrichment_celltype_v019_2=CL:0000322,2.32e-07,3|ontology_enrichment_development_v019=UBERON:0006298;1.42e-19;1!UBERON:0008801;3.25e-19;1!UBERON:0007123;2.70e-15;5!UBERON:0008947;2.06e-10;29!UBERON:0001041;4.47e-10;30|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3910;2.72e-10;2|ontology_enrichment_disease_v019_2=DOID:3910,2.07e-10,2|ontology_enrichment_uberon=UBERON:0001829!1.53e-12!2;UBERON:0003127!4.95e-12!2;UBERON:0000341!8.58e-12!2;UBERON:0001004!2.19e-10!72;UBERON:0001044!4.61e-09!6;UBERON:0003293!4.61e-09!6;UBERON:0003294!4.61e-09!6;UBERON:0010047!4.61e-09!6;UBERON:0000167!4.61e-09!6;UBERON:0001007!1.02e-08!155;UBERON:0001555!1.02e-08!155;UBERON:0007026!1.02e-08!155;UBERON:0007023!1.02e-08!115;UBERON:0004119!1.11e-08!169;UBERON:0000925!1.11e-08!169;UBERON:0006595!1.11e-08!169;UBERON:0004921!1.69e-07!129;UBERON:0004185!1.69e-07!129;UBERON:0005178!2.49e-07!34;UBERON:0002224!2.49e-07!34;UBERON:0002171!2.95e-07!1;UBERON:0006518!2.95e-07!1;UBERON:0008949!2.95e-07!1;UBERON:0000101!2.95e-07!1;UBERON:0002167!2.95e-07!1;UBERON:0001736!3.52e-07!1;UBERON:0006298!3.52e-07!1;UBERON:0005181!4.30e-07!35;UBERON:0000065!4.92e-07!53;UBERON:0001831!4.97e-07!1;UBERON:0001567!4.97e-07!1;UBERON:0008801!4.97e-07!1;UBERON:0001041!5.60e-07!98;UBERON:0007029!7.39e-07!1|ontology_enrichment_uberon_v019=UBERON:0001829;6.22e-37;2!UBERON:0002171;8.94e-20;1!UBERON:0006518;8.94e-20;1!UBERON:0008949;8.94e-20;1!UBERON:0000101;8.94e-20;1!UBERON:0002167;8.94e-20;1!UBERON:0001736;1.42e-19;1!UBERON:0001831;3.25e-19;1!UBERON:0001567;3.25e-19;1!UBERON:0002046;2.70e-15;5!UBERON:0002048;1.28e-13;22!UBERON:0000117;1.28e-13;22!UBERON:0000171;1.28e-13;22!UBERON:0000170;1.28e-13;22!UBERON:0001044;4.95e-13;6!UBERON:0003293;4.95e-13;6!UBERON:0003294;4.95e-13;6!UBERON:0010047;4.95e-13;6!UBERON:0003408;4.95e-13;6!UBERON:0000167;4.95e-13;6!UBERON:0004903;2.72e-10;2!UBERON:0004089;2.72e-10;2!UBERON:0002173;2.72e-10;2!UBERON:0002186;2.72e-10;2!UBERON:0005178;2.13e-07;34!UBERON:0002224;2.13e-07;34!UBERON:0004821;2.79e-07;3!UBERON:0007499;2.79e-07;3!UBERON:0003215;2.79e-07;3!UBERON:0010368;2.79e-07;3!UBERON:0009911;2.79e-07;3!UBERON:0002299;2.79e-07;3!UBERON:0006524;2.79e-07;3!UBERON:0008874;2.79e-07;3!UBERON:0002169;2.79e-07;3!UBERON:0004894;2.79e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001829,9.84e-37,2;UBERON:0002171,8.95e-20,1;UBERON:0006518,8.95e-20,1;UBERON:0008949,8.95e-20,1;UBERON:0000101,8.95e-20,1;UBERON:0002167,8.95e-20,1;UBERON:0001736,1.56e-19,1;UBERON:0006298,1.56e-19,1;UBERON:0001831,4.69e-19,1;UBERON:0001567,4.69e-19,1;UBERON:0008801,4.69e-19,1;UBERON:0002046,2.70e-15,5;UBERON:0004117,2.70e-15,5;UBERON:0007689,2.70e-15,5;UBERON:0007123,2.70e-15,5;UBERON:0003091,2.70e-15,5;UBERON:0002048,1.14e-13,22;UBERON:0000117,1.14e-13,22;UBERON:0000171,1.14e-13,22;UBERON:0000170,1.14e-13,22;UBERON:0005597,1.14e-13,22;UBERON:0000118,1.14e-13,22;UBERON:0001044,5.76e-13,6;UBERON:0003293,5.76e-13,6;UBERON:0003294,5.76e-13,6;UBERON:0010047,5.76e-13,6;UBERON:0000167,5.76e-13,6;UBERON:0004903,2.07e-10,2;UBERON:0002173,2.07e-10,2;UBERON:0002186,2.07e-10,2;UBERON:0004089,3.27e-10,2;UBERON:0005178,5.87e-09,34;UBERON:0002224,5.87e-09,34;UBERON:0001004,1.03e-08,74;UBERON:0005181,1.04e-08,35;UBERON:0005153,2.97e-08,37;UBERON:0003408,3.76e-08,10;UBERON:0008947,4.82e-08,38;UBERON:0003258,4.82e-08,38;UBERON:0005911,7.85e-08,82;UBERON:0009722,1.84e-07,11;UBERON:0007690,1.84e-07,11;UBERON:0001007,1.88e-07,145;UBERON:0001555,1.88e-07,145;UBERON:0007026,1.88e-07,145;UBERON:0001041,2.23e-07,87;UBERON:0004821,2.32e-07,3;UBERON:0003215,2.32e-07,3;UBERON:0010368,2.32e-07,3;UBERON:0009911,2.32e-07,3;UBERON:0002299,2.32e-07,3;UBERON:0006524,2.32e-07,3;UBERON:0008874,2.32e-07,3;UBERON:0002169,2.32e-07,3;UBERON:0004894,2.32e-07,3;UBERON:0001048,9.53e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=128218 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28275 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-4bp_to_ENST00000432792,uc001cir.2_5end | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_5_at_TMEM125_5end | |||
|id=chr1:43735678..43735691,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,2.32e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.42e-19;1!UBERON:0008801;3.25e-19;1!UBERON:0007123;2.70e-15;5!UBERON:0008947;2.06e-10;29!UBERON:0001041;4.47e-10;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;2.72e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.07e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001829!1.53e-12!2;UBERON:0003127!4.95e-12!2;UBERON:0000341!8.58e-12!2;UBERON:0001004!2.19e-10!72;UBERON:0001044!4.61e-09!6;UBERON:0003293!4.61e-09!6;UBERON:0003294!4.61e-09!6;UBERON:0010047!4.61e-09!6;UBERON:0000167!4.61e-09!6;UBERON:0001007!1.02e-08!155;UBERON:0001555!1.02e-08!155;UBERON:0007026!1.02e-08!155;UBERON:0007023!1.02e-08!115;UBERON:0004119!1.11e-08!169;UBERON:0000925!1.11e-08!169;UBERON:0006595!1.11e-08!169;UBERON:0004921!1.69e-07!129;UBERON:0004185!1.69e-07!129;UBERON:0005178!2.49e-07!34;UBERON:0002224!2.49e-07!34;UBERON:0002171!2.95e-07!1;UBERON:0006518!2.95e-07!1;UBERON:0008949!2.95e-07!1;UBERON:0000101!2.95e-07!1;UBERON:0002167!2.95e-07!1;UBERON:0001736!3.52e-07!1;UBERON:0006298!3.52e-07!1;UBERON:0005181!4.30e-07!35;UBERON:0000065!4.92e-07!53;UBERON:0001831!4.97e-07!1;UBERON:0001567!4.97e-07!1;UBERON:0008801!4.97e-07!1;UBERON:0001041!5.60e-07!98;UBERON:0007029!7.39e-07!1 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001829,9.84e-37,2;UBERON:0002171,8.95e-20,1;UBERON:0006518,8.95e-20,1;UBERON:0008949,8.95e-20,1;UBERON:0000101,8.95e-20,1;UBERON:0002167,8.95e-20,1;UBERON:0001736,1.56e-19,1;UBERON:0006298,1.56e-19,1;UBERON:0001831,4.69e-19,1;UBERON:0001567,4.69e-19,1;UBERON:0008801,4.69e-19,1;UBERON:0002046,2.70e-15,5;UBERON:0004117,2.70e-15,5;UBERON:0007689,2.70e-15,5;UBERON:0007123,2.70e-15,5;UBERON:0003091,2.70e-15,5;UBERON:0002048,1.14e-13,22;UBERON:0000117,1.14e-13,22;UBERON:0000171,1.14e-13,22;UBERON:0000170,1.14e-13,22;UBERON:0005597,1.14e-13,22;UBERON:0000118,1.14e-13,22;UBERON:0001044,5.76e-13,6;UBERON:0003293,5.76e-13,6;UBERON:0003294,5.76e-13,6;UBERON:0010047,5.76e-13,6;UBERON:0000167,5.76e-13,6;UBERON:0004903,2.07e-10,2;UBERON:0002173,2.07e-10,2;UBERON:0002186,2.07e-10,2;UBERON:0004089,3.27e-10,2;UBERON:0005178,5.87e-09,34;UBERON:0002224,5.87e-09,34;UBERON:0001004,1.03e-08,74;UBERON:0005181,1.04e-08,35;UBERON:0005153,2.97e-08,37;UBERON:0003408,3.76e-08,10;UBERON:0008947,4.82e-08,38;UBERON:0003258,4.82e-08,38;UBERON:0005911,7.85e-08,82;UBERON:0009722,1.84e-07,11;UBERON:0007690,1.84e-07,11;UBERON:0001007,1.88e-07,145;UBERON:0001555,1.88e-07,145;UBERON:0007026,1.88e-07,145;UBERON:0001041,2.23e-07,87;UBERON:0004821,2.32e-07,3;UBERON:0003215,2.32e-07,3;UBERON:0010368,2.32e-07,3;UBERON:0009911,2.32e-07,3;UBERON:0002299,2.32e-07,3;UBERON:0006524,2.32e-07,3;UBERON:0008874,2.32e-07,3;UBERON:0002169,2.32e-07,3;UBERON:0004894,2.32e-07,3;UBERON:0001048,9.53e-07,160 | |||
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|short_description=p5@TMEM125 | |||
}} |
Revision as of 05:48, 12 September 2013
Short description: | p5@TMEM125 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_TMEM125_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | -4bp_to_ENST00000432792, uc001cir.2_5end |
EntrezGene: | TMEM125 |
HGNC: | 28275 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.07e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.