FFCP PHASE1:Hg19::chr1:176176604..176176625,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64326|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17440|TSSclassifier=S|UniProt=Q8NHY2|association_with_transcript=3bp_to_ENST00000367669_5end|coexpression_cluster_id=C2|description=CAGE_peak_5_at_RFWD2_5end|id=chr1:176176604..176176625,-|ontology_enrichment_celltype=CL:0002057!7.08e-20!42;CL:0000860!2.93e-18!45;CL:0000766!6.38e-14!76;CL:0000763!7.06e-14!112;CL:0000049!7.06e-14!112;CL:0002009!2.36e-13!65;CL:0000557!1.49e-12!71;CL:0002194!1.84e-12!63;CL:0000576!1.84e-12!63;CL:0000040!1.84e-12!63;CL:0000559!1.84e-12!63;CL:0002032!7.85e-12!165;CL:0000837!7.85e-12!165;CL:0000037!1.06e-11!172;CL:0000566!1.06e-11!172;CL:0000839!1.94e-11!70;CL:0000988!8.35e-11!182;CL:0000738!3.96e-10!140;CL:0002087!1.36e-09!119;CL:0002031!1.83e-09!124|ontology_enrichment_celltype_v019=CL:0000860;5.36e-32;33!CL:0002057;5.36e-32;33!CL:0000473;5.55e-23;39!CL:0000234;5.55e-23;39!CL:0000576;4.20e-20;48!CL:0000766;5.11e-15;69!CL:0000763;4.96e-09;100!CL:0002087;2.41e-07;104!CL:0000094;2.52e-07;8|ontology_enrichment_celltype_v019_2=CL:0000860,2.61e-34,42;CL:0002057,2.61e-34,42;CL:0000473,1.63e-30,48;CL:0000234,1.63e-30,48;CL:0000766,4.92e-29,72;CL:0002009,1.91e-28,61;CL:0002194,2.04e-26,59;CL:0000576,2.04e-26,59;CL:0000040,2.04e-26,59;CL:0000559,2.04e-26,59;CL:0000557,2.22e-26,67;CL:0000763,9.85e-25,108;CL:0000049,9.85e-25,108;CL:0000839,8.81e-24,66;CL:0000738,9.28e-19,136;CL:0002032,1.59e-18,161;CL:0000837,1.59e-18,161;CL:0000037,8.96e-18,168;CL:0000988,1.03e-16,177;CL:0002031,1.09e-16,120;CL:0002087,4.85e-16,115;CL:0000094,2.12e-07,8|ontology_enrichment_development_v019=CL:0002057;4.72e-25;42!CL:0000049;5.26e-08;108|ontology_enrichment_disease=DOID:14566!9.20e-08!239;DOID:162!1.18e-07!235|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.19e-14!102;UBERON:0003061!2.19e-14!102;UBERON:0002193!1.36e-11!112;UBERON:0002371!3.67e-10!80;UBERON:0001474!1.28e-09!86;UBERON:0002405!1.56e-08!115|ontology_enrichment_uberon_v019=UBERON:0000178;9.72e-09;15!UBERON:0000179;9.72e-09;15!UBERON:0000463;9.72e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.74e-26,98;UBERON:0003061,5.74e-26,98;UBERON:0002193,4.86e-22,108;UBERON:0002371,1.12e-21,76;UBERON:0001474,3.77e-20,82;UBERON:0004765,3.40e-17,90;UBERON:0002405,2.25e-15,93;UBERON:0001434,3.29e-14,100;UBERON:0000178,6.85e-09,15;UBERON:0000179,6.85e-09,15;UBERON:0000463,6.85e-09,15;UBERON:0003081,7.06e-08,203|phase1_expression=0,0.428201047781966,0.281908808191942,0,0,1.74467704820074,0,0,0.783556884599516,0,1.39560233594486,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0,0.572471974262113,0.547497700291537,0.753255837568817,0.764134057479513,0.0821005894499457,0.314843125254717,1.57345710739562,0,0.928896739896456,0,0.6024118375565,0.739508020333575,1.16200800870452,0.568676929949686,0.587200878669695,2.76997704265939,4.8130667392834,1.95309783644267,0,0.32389366601898,0.257575567634187,2.61716829803216,1.13362783106643,0.970336244751265,5.81072592264212,4.52284676824008,1.23882548358041,9.49384894663097,6.66017836975662,3.54723344832878,5.5159308917859,1.29096936716765,2.70852973188684,3.20011977222428,1.91034305040492,1.57306439111559,5.81559395504715,1.92557416245656,4.47535988059329,5.60747210317417,4.18873681005427,2.55734850319616,13.3496249769149,5.10646702222026,1.86846674698672,6.53246529667532,5.73631210262222,3.69221035998698,4.84319602106695,5.89244217580104,5.06339819905415,0.211255286311942,0.212604299965044,0.838634582033504,1.23561494261145,0.300353785683013,0.803627933485401,0.855038231223746,1.79025009479181,0.365328307529268,1.75996244461323,1.09227722252426,0,0.426730222566507,0,0.574752439954483,0,0,0,0,1.52909291250092,0,0.560508562981536,0.263384084775077,1.57367816091066,0.393010762749165,0,0,0.651844533267181,0,0,0,0,0.443067789167242,0,0,0,0.164437904603676,0,0,0,0.267540828089713,0,0.113309342697566,0.766440987203842,0.34362744548263,0,0,0,1.90090408889675,0.301150238155546,0,0,0.710331756132051,0.821127996921047,0.604820229674197,0.534880391567015,0.724122019413995,0,0,0.383587685530591,0,0,0.144846518960824,0,0.973269740605272,0.661743720148475,0.221729397462564,0.527008714158756,0.196468613246569,0.364295288292542,0,0,0.522389211897802,0.664789802594326,0.238490624305342,0,0,0.198762407366705,0,0.694281003215189,0.56530794192401,0,0,0.417989933073621,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0.446498641420399,0,0.337834441449967,0,0.949265659568129,0.732806975721629,18.4492584410489,15.511210565933,0,0,0,0.397227542439656,0.286836620748814,0,0,2.1349799145941,0,0.622422070799533,0.134710672069688,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0.23486899728753,0.323745888736263,0.280901613404497,0,0.122834317311768,0.206651562351531,0,0,0,0,0.336672227908132,0.875829639103749,0,0,0,0.45071417671979,0.453728732640084,0.358779271377724,0,0.211931901159562,0,0.309157587715317,0.257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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64326 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17440 | |||
|TSSclassifier=S | |||
|UniProt=Q8NHY2 | |||
|association_with_transcript=3bp_to_ENST00000367669_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_5_at_RFWD2_5end | |||
|id=chr1:176176604..176176625,- | |||
|ontology_enrichment_celltype=CL:0002057!7.08e-20!42;CL:0000860!2.93e-18!45;CL:0000766!6.38e-14!76;CL:0000763!7.06e-14!112;CL:0000049!7.06e-14!112;CL:0002009!2.36e-13!65;CL:0000557!1.49e-12!71;CL:0002194!1.84e-12!63;CL:0000576!1.84e-12!63;CL:0000040!1.84e-12!63;CL:0000559!1.84e-12!63;CL:0002032!7.85e-12!165;CL:0000837!7.85e-12!165;CL:0000037!1.06e-11!172;CL:0000566!1.06e-11!172;CL:0000839!1.94e-11!70;CL:0000988!8.35e-11!182;CL:0000738!3.96e-10!140;CL:0002087!1.36e-09!119;CL:0002031!1.83e-09!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.36e-32;33!CL:0002057;5.36e-32;33!CL:0000473;5.55e-23;39!CL:0000234;5.55e-23;39!CL:0000576;4.20e-20;48!CL:0000766;5.11e-15;69!CL:0000763;4.96e-09;100!CL:0002087;2.41e-07;104!CL:0000094;2.52e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.61e-34,42;CL:0002057,2.61e-34,42;CL:0000473,1.63e-30,48;CL:0000234,1.63e-30,48;CL:0000766,4.92e-29,72;CL:0002009,1.91e-28,61;CL:0002194,2.04e-26,59;CL:0000576,2.04e-26,59;CL:0000040,2.04e-26,59;CL:0000559,2.04e-26,59;CL:0000557,2.22e-26,67;CL:0000763,9.85e-25,108;CL:0000049,9.85e-25,108;CL:0000839,8.81e-24,66;CL:0000738,9.28e-19,136;CL:0002032,1.59e-18,161;CL:0000837,1.59e-18,161;CL:0000037,8.96e-18,168;CL:0000988,1.03e-16,177;CL:0002031,1.09e-16,120;CL:0002087,4.85e-16,115;CL:0000094,2.12e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.72e-25;42!CL:0000049;5.26e-08;108 | |||
|ontology_enrichment_disease=DOID:14566!9.20e-08!239;DOID:162!1.18e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.19e-14!102;UBERON:0003061!2.19e-14!102;UBERON:0002193!1.36e-11!112;UBERON:0002371!3.67e-10!80;UBERON:0001474!1.28e-09!86;UBERON:0002405!1.56e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.72e-09;15!UBERON:0000179;9.72e-09;15!UBERON:0000463;9.72e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.74e-26,98;UBERON:0003061,5.74e-26,98;UBERON:0002193,4.86e-22,108;UBERON:0002371,1.12e-21,76;UBERON:0001474,3.77e-20,82;UBERON:0004765,3.40e-17,90;UBERON:0002405,2.25e-15,93;UBERON:0001434,3.29e-14,100;UBERON:0000178,6.85e-09,15;UBERON:0000179,6.85e-09,15;UBERON:0000463,6.85e-09,15;UBERON:0003081,7.06e-08,203 | |||
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| |||
|short_description=p5@RFWD2 | |||
}} |
Revision as of 01:57, 12 September 2013
Short description: | p5@RFWD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_RFWD2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 3bp_to_ENST00000367669_5end |
EntrezGene: | RFWD2 |
HGNC: | 17440 |
UniProt: | Q8NHY2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.61e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.61e-34 | 42 |
defensive cell | 1.63e-30 | 48 |
phagocyte | 1.63e-30 | 48 |
myeloid leukocyte | 4.92e-29 | 72 |
macrophage dendritic cell progenitor | 1.91e-28 | 61 |
monopoietic cell | 2.04e-26 | 59 |
monocyte | 2.04e-26 | 59 |
monoblast | 2.04e-26 | 59 |
promonocyte | 2.04e-26 | 59 |
granulocyte monocyte progenitor cell | 2.22e-26 | 67 |
myeloid cell | 9.85e-25 | 108 |
common myeloid progenitor | 9.85e-25 | 108 |
myeloid lineage restricted progenitor cell | 8.81e-24 | 66 |
leukocyte | 9.28e-19 | 136 |
hematopoietic oligopotent progenitor cell | 1.59e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.59e-18 | 161 |
hematopoietic stem cell | 8.96e-18 | 168 |
hematopoietic cell | 1.03e-16 | 177 |
hematopoietic lineage restricted progenitor cell | 1.09e-16 | 120 |
nongranular leukocyte | 4.85e-16 | 115 |
granulocyte | 2.12e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.74e-26 | 98 |
blood island | 5.74e-26 | 98 |
hemolymphoid system | 4.86e-22 | 108 |
bone marrow | 1.12e-21 | 76 |
bone element | 3.77e-20 | 82 |
skeletal element | 3.40e-17 | 90 |
immune system | 2.25e-15 | 93 |
skeletal system | 3.29e-14 | 100 |
blood | 6.85e-09 | 15 |
haemolymphatic fluid | 6.85e-09 | 15 |
organism substance | 6.85e-09 | 15 |
lateral plate mesoderm | 7.06e-08 | 203 |
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