FFCP PHASE1:Hg19::chr1:207262638..207262666,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=725|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1328|TSSclassifier=S|UniProt=P20851|association_with_transcript=10bp_to_ENST00000391923,NM_001017367,uc001hfm.2_5end|coexpression_cluster_id=C5|description=CAGE_peak_3_at_C4BPB_5end|id=chr1:207262638..207262666,+|ontology_enrichment_celltype=CL:0000181!5.56e-10!12;CL:0000417!5.56e-10!12;CL:0000668!5.56e-10!12;CL:0000414!5.56e-10!12;CL:0000412!5.56e-10!12;CL:0000182!5.56e-10!12;CL:0002150!2.34e-08!3;CL:0000861!2.34e-08!3|ontology_enrichment_celltype_v019=CL:0000182;3.27e-19;12|ontology_enrichment_celltype_v019_2=CL:0000182,3.37e-19,12;CL:0000066,1.45e-08,253|ontology_enrichment_development_v019=UBERON:0008947;3.20e-16;29!UBERON:0004161;1.22e-14;11!UBERON:0009497;2.36e-12;13!UBERON:0005425;2.79e-07;1!UBERON:0003104;5.87e-07;31|ontology_enrichment_disease=DOID:305!1.19e-11!106;DOID:162!7.30e-09!235;DOID:14566!1.85e-08!239;DOID:0050687!1.98e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,7.27e-12,106;DOID:0050687,5.67e-08,143|ontology_enrichment_uberon=UBERON:0001737!6.34e-23!9;UBERON:0009497!1.53e-16!25;UBERON:0000015!1.53e-16!25;UBERON:0002423!1.53e-16!25;UBERON:0006235!1.53e-16!25;UBERON:0004161!1.53e-16!25;UBERON:0000077!5.45e-16!130;UBERON:0004921!7.09e-15!129;UBERON:0004185!7.09e-15!129;UBERON:0009854!1.61e-13!23;UBERON:0001007!2.05e-13!155;UBERON:0001555!2.05e-13!155;UBERON:0007026!2.05e-13!155;UBERON:0004119!3.09e-13!169;UBERON:0000925!3.09e-13!169;UBERON:0006595!3.09e-13!169;UBERON:0001041!1.48e-12!98;UBERON:0008835!4.93e-12!22;UBERON:0003894!4.93e-12!22;UBERON:0009856!1.30e-11!26;UBERON:0002294!4.64e-11!7;UBERON:0001173!4.64e-11!7;UBERON:0004912!4.64e-11!7;UBERON:0003929!2.46e-10!54;UBERON:0007499!2.86e-10!25;UBERON:0005172!5.84e-10!55;UBERON:0005173!5.84e-10!55;UBERON:0002107!8.72e-10!19;UBERON:0006925!8.72e-10!19;UBERON:0008836!8.72e-10!19;UBERON:0001557!9.10e-10!19;UBERON:0001048!1.27e-08!168;UBERON:0002417!1.54e-08!61;UBERON:0000916!1.54e-08!61;UBERON:0005057!4.17e-08!26;UBERON:0002110!2.18e-07!3;UBERON:0006242!2.18e-07!3;UBERON:0003104!3.76e-07!238;UBERON:0009142!3.76e-07!238;UBERON:0000466!7.14e-07!126;UBERON:0005911!7.20e-07!82|ontology_enrichment_uberon_v019=UBERON:0001737;2.12e-55;9!UBERON:0001557;2.12e-55;9!UBERON:0002107;5.63e-21;19!UBERON:0006925;5.63e-21;19!UBERON:0002423;1.18e-15;25!UBERON:0002368;6.84e-13;33!UBERON:0002365;5.84e-12;31!UBERON:0002330;5.84e-12;31!UBERON:0000072;9.22e-12;37!UBERON:0000065;6.48e-10;44!UBERON:0000949;1.31e-09;43!UBERON:0000941;2.79e-07;1!UBERON:0001785;2.79e-07;1!UBERON:0002464;2.79e-07;1!UBERON:0004904;2.79e-07;1!UBERON:0001021;2.79e-07;1!UBERON:0002530;8.68e-07;57|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.05e-55,9;UBERON:0001557,1.60e-25,19;UBERON:0002107,5.78e-21,19;UBERON:0006925,5.78e-21,19;UBERON:0008836,5.78e-21,19;UBERON:0008835,6.06e-18,22;UBERON:0003894,6.06e-18,22;UBERON:0001041,8.00e-18,87;UBERON:0004921,2.74e-17,118;UBERON:0009854,4.12e-17,23;UBERON:0007499,1.20e-15,25;UBERON:0009497,1.20e-15,25;UBERON:0000015,1.20e-15,25;UBERON:0002423,1.20e-15,25;UBERON:0006235,1.20e-15,25;UBERON:0004161,1.20e-15,25;UBERON:0009856,5.34e-15,26;UBERON:0002368,1.20e-13,35;UBERON:0001007,2.49e-13,145;UBERON:0001555,2.49e-13,145;UBERON:0007026,2.49e-13,145;UBERON:0002365,2.19e-12,31;UBERON:0002330,2.19e-12,31;UBERON:0008947,4.88e-12,38;UBERON:0003258,4.88e-12,38;UBERON:0004119,1.05e-11,160;UBERON:0000925,1.05e-11,160;UBERON:0006595,1.05e-11,160;UBERON:0001048,1.78e-10,160;UBERON:0000949,2.78e-10,45;UBERON:0003929,3.26e-10,54;UBERON:0000072,1.87e-09,47;UBERON:0002530,3.30e-09,59;UBERON:0011216,4.65e-09,223;UBERON:0005172,2.54e-08,54;UBERON:0005173,2.54e-08,54;UBERON:0000065,4.82e-08,54;UBERON:0002417,2.42e-07,60;UBERON:0000916,2.42e-07,60;UBERON:0000941,2.98e-07,1;UBERON:0001785,2.98e-07,1;UBERON:0002464,2.98e-07,1;UBERON:0004904,2.98e-07,1;UBERON:0001021,2.98e-07,1;UBERON:0003902,2.98e-07,1;UBERON:0005425,2.98e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.86179440231095,5.22612539242115,6.98931986662098,7.05881425487321,3.92182999366331,5.21995362044413,7.41572194880904,7.45641567476315,6.92544882503503,0,0,0,0,380.265104465493,515.001461539076,295.394953340702,0,5.53447973444011,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=725 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1328 | |||
|TSSclassifier=S | |||
|UniProt=P20851 | |||
|association_with_transcript=10bp_to_ENST00000391923,NM_001017367,uc001hfm.2_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_C4BPB_5end | |||
|id=chr1:207262638..207262666,+ | |||
|ontology_enrichment_celltype=CL:0000181!5.56e-10!12;CL:0000417!5.56e-10!12;CL:0000668!5.56e-10!12;CL:0000414!5.56e-10!12;CL:0000412!5.56e-10!12;CL:0000182!5.56e-10!12;CL:0002150!2.34e-08!3;CL:0000861!2.34e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.27e-19;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.37e-19,12;CL:0000066,1.45e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.20e-16;29!UBERON:0004161;1.22e-14;11!UBERON:0009497;2.36e-12;13!UBERON:0005425;2.79e-07;1!UBERON:0003104;5.87e-07;31 | |||
|ontology_enrichment_disease=DOID:305!1.19e-11!106;DOID:162!7.30e-09!235;DOID:14566!1.85e-08!239;DOID:0050687!1.98e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.27e-12,106;DOID:0050687,5.67e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!6.34e-23!9;UBERON:0009497!1.53e-16!25;UBERON:0000015!1.53e-16!25;UBERON:0002423!1.53e-16!25;UBERON:0006235!1.53e-16!25;UBERON:0004161!1.53e-16!25;UBERON:0000077!5.45e-16!130;UBERON:0004921!7.09e-15!129;UBERON:0004185!7.09e-15!129;UBERON:0009854!1.61e-13!23;UBERON:0001007!2.05e-13!155;UBERON:0001555!2.05e-13!155;UBERON:0007026!2.05e-13!155;UBERON:0004119!3.09e-13!169;UBERON:0000925!3.09e-13!169;UBERON:0006595!3.09e-13!169;UBERON:0001041!1.48e-12!98;UBERON:0008835!4.93e-12!22;UBERON:0003894!4.93e-12!22;UBERON:0009856!1.30e-11!26;UBERON:0002294!4.64e-11!7;UBERON:0001173!4.64e-11!7;UBERON:0004912!4.64e-11!7;UBERON:0003929!2.46e-10!54;UBERON:0007499!2.86e-10!25;UBERON:0005172!5.84e-10!55;UBERON:0005173!5.84e-10!55;UBERON:0002107!8.72e-10!19;UBERON:0006925!8.72e-10!19;UBERON:0008836!8.72e-10!19;UBERON:0001557!9.10e-10!19;UBERON:0001048!1.27e-08!168;UBERON:0002417!1.54e-08!61;UBERON:0000916!1.54e-08!61;UBERON:0005057!4.17e-08!26;UBERON:0002110!2.18e-07!3;UBERON:0006242!2.18e-07!3;UBERON:0003104!3.76e-07!238;UBERON:0009142!3.76e-07!238;UBERON:0000466!7.14e-07!126;UBERON:0005911!7.20e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.12e-55;9!UBERON:0001557;2.12e-55;9!UBERON:0002107;5.63e-21;19!UBERON:0006925;5.63e-21;19!UBERON:0002423;1.18e-15;25!UBERON:0002368;6.84e-13;33!UBERON:0002365;5.84e-12;31!UBERON:0002330;5.84e-12;31!UBERON:0000072;9.22e-12;37!UBERON:0000065;6.48e-10;44!UBERON:0000949;1.31e-09;43!UBERON:0000941;2.79e-07;1!UBERON:0001785;2.79e-07;1!UBERON:0002464;2.79e-07;1!UBERON:0004904;2.79e-07;1!UBERON:0001021;2.79e-07;1!UBERON:0002530;8.68e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.05e-55,9;UBERON:0001557,1.60e-25,19;UBERON:0002107,5.78e-21,19;UBERON:0006925,5.78e-21,19;UBERON:0008836,5.78e-21,19;UBERON:0008835,6.06e-18,22;UBERON:0003894,6.06e-18,22;UBERON:0001041,8.00e-18,87;UBERON:0004921,2.74e-17,118;UBERON:0009854,4.12e-17,23;UBERON:0007499,1.20e-15,25;UBERON:0009497,1.20e-15,25;UBERON:0000015,1.20e-15,25;UBERON:0002423,1.20e-15,25;UBERON:0006235,1.20e-15,25;UBERON:0004161,1.20e-15,25;UBERON:0009856,5.34e-15,26;UBERON:0002368,1.20e-13,35;UBERON:0001007,2.49e-13,145;UBERON:0001555,2.49e-13,145;UBERON:0007026,2.49e-13,145;UBERON:0002365,2.19e-12,31;UBERON:0002330,2.19e-12,31;UBERON:0008947,4.88e-12,38;UBERON:0003258,4.88e-12,38;UBERON:0004119,1.05e-11,160;UBERON:0000925,1.05e-11,160;UBERON:0006595,1.05e-11,160;UBERON:0001048,1.78e-10,160;UBERON:0000949,2.78e-10,45;UBERON:0003929,3.26e-10,54;UBERON:0000072,1.87e-09,47;UBERON:0002530,3.30e-09,59;UBERON:0011216,4.65e-09,223;UBERON:0005172,2.54e-08,54;UBERON:0005173,2.54e-08,54;UBERON:0000065,4.82e-08,54;UBERON:0002417,2.42e-07,60;UBERON:0000916,2.42e-07,60;UBERON:0000941,2.98e-07,1;UBERON:0001785,2.98e-07,1;UBERON:0002464,2.98e-07,1;UBERON:0004904,2.98e-07,1;UBERON:0001021,2.98e-07,1;UBERON:0003902,2.98e-07,1;UBERON:0005425,2.98e-07,1 | |||
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|short_description=p3@C4BPB | |||
}} |
Revision as of 03:13, 12 September 2013
Short description: | p3@C4BPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_C4BPB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 10bp_to_ENST00000391923, NM_001017367, uc001hfm.2_5end |
EntrezGene: | C4BPB |
HGNC: | 1328 |
UniProt: | P20851 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.37e-19 | 12 |
epithelial cell | 1.45e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.27e-12 | 106 |
cell type cancer | 5.67e-08 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.