FFCP PHASE1:Hg19::chr10:3477893..3477912,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C328|description=CAGE_peak_at_chr10:3477893..3477912,-|id=chr10:3477893..3477912,-|ontology_enrichment_celltype=CL:0000115!3.32e-27!35;CL:0002139!2.13e-26!24;CL:0002078!2.03e-20!44;CL:0005020!5.82e-17!6;CL:0002138!5.82e-17!6;CL:0005022!5.82e-17!6;CL:0000213!1.90e-14!57;CL:0000215!1.90e-14!57;CL:0000071!1.06e-13!18;CL:0002546!1.06e-13!18;CL:0002144!1.52e-09!3;CL:0002618!7.37e-09!3;CL:0000222!1.77e-08!119;CL:0002543!1.52e-07!6;CL:0000666!5.07e-07!4;CL:0002188!5.07e-07!4|ontology_enrichment_celltype_v019=CL:0000115;1.63e-49;36!CL:0002139;7.54e-39;24!CL:0002188;2.95e-37;5!CL:0002144;2.34e-36;3!CL:0002078;4.89e-35;45!CL:0002138;5.59e-32;6!CL:1000746;9.72e-27;7!CL:1000612;9.72e-27;7!CL:0000213;3.83e-24;58!CL:0000215;3.83e-24;58!CL:0000071;2.13e-16;18!CL:0002681;9.58e-16;12!CL:0002584;9.58e-16;12!CL:1000449;1.18e-12;15!CL:1000497;3.40e-11;17!CL:0002518;3.40e-11;17!CL:0002545;3.09e-07;2!CL:0002262;4.42e-07;2!CL:1000398;4.42e-07;2|ontology_enrichment_celltype_v019_2=CL:0000115,6.53e-62,36;CL:0002078,3.21e-49,45;CL:0002139,8.63e-39,24;CL:0000213,7.88e-38,58;CL:0000215,7.88e-38,58;CL:0002188,2.23e-37,5;CL:0002144,2.08e-36,3;CL:0005020,6.56e-32,6;CL:0002138,6.56e-32,6;CL:0005022,6.56e-32,6;CL:1000746,7.96e-27,7;CL:1000612,7.96e-27,7;CL:0000222,3.12e-17,121;CL:0000071,2.20e-16,18;CL:0002546,2.20e-16,18;CL:0002681,8.54e-16,12;CL:0002584,8.54e-16,12;CL:1000449,1.08e-12,15;CL:1000497,3.14e-11,17;CL:0002518,3.14e-11,17;CL:0000066,6.67e-10,253;CL:0002321,1.49e-08,250;CL:0002545,3.28e-07,2;CL:0002262,4.17e-07,2;CL:1000398,4.17e-07,2|ontology_enrichment_development_v019=CL:0005022;5.59e-32;6!CL:0002546;2.13e-16;18!CL:0000222;7.01e-10;121|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000055!4.86e-16!69;UBERON:0001986!1.06e-13!18;UBERON:0004638!1.06e-13!18;UBERON:0004852!1.06e-13!18;UBERON:0002049!3.59e-13!79;UBERON:0007798!3.59e-13!79;UBERON:0001473!1.72e-12!8;UBERON:0004536!1.72e-12!8;UBERON:0006558!1.72e-12!8;UBERON:0000487!8.82e-11!22;UBERON:0003914!4.71e-10!118;UBERON:0002465!8.26e-10!10;UBERON:0001981!1.07e-09!60;UBERON:0007500!1.07e-09!60;UBERON:0004537!1.07e-09!60;UBERON:0006965!1.07e-09!60;UBERON:0001915!1.52e-09!3;UBERON:0001982!1.52e-09!3;UBERON:0004535!1.74e-09!110;UBERON:0006914!3.27e-09!25;UBERON:0001009!4.64e-09!113;UBERON:0000477!5.89e-09!286;UBERON:0002066!1.12e-08!5;UBERON:0004872!2.94e-08!84;UBERON:0004111!4.20e-08!241;UBERON:0001638!3.20e-07!9;UBERON:0003920!3.20e-07!9;UBERON:0004582!3.20e-07!9;UBERON:0000490!3.23e-07!138|ontology_enrichment_uberon_v019=UBERON:0010523;2.34e-36;3!UBERON:0001915;2.34e-36;3!UBERON:0001982;2.34e-36;3!UBERON:0000074;9.72e-27;7!UBERON:0001229;9.72e-27;7!UBERON:0001473;4.39e-24;8!UBERON:0004536;4.39e-24;8!UBERON:0006558;4.39e-24;8!UBERON:0002465;2.45e-19;10!UBERON:0000353;2.95e-19;15!UBERON:0004638;2.13e-16;18!UBERON:0001986;2.13e-16;18!UBERON:0004852;2.13e-16;18!UBERON:0001225;9.58e-16;12!UBERON:0008987;9.58e-16;12!UBERON:0000487;2.06e-13;22!UBERON:0001851;1.18e-12;15!UBERON:0006555;1.18e-12;15!UBERON:0004819;1.18e-12;15!UBERON:0001285;1.18e-12;15!UBERON:0007684;1.18e-12;15!UBERON:0006914;8.53e-12;25!UBERON:0000490;9.73e-11;33!UBERON:0000055;7.11e-10;65!UBERON:0002049;1.40e-08;75!UBERON:0007798;1.40e-08;75!UBERON:0002113;5.44e-08;24!UBERON:0011143;5.44e-08;24!UBERON:0002405;2.65e-07;27!UBERON:0005800;3.09e-07;2!UBERON:0001515;3.09e-07;2!UBERON:0001281;4.42e-07;2!UBERON:0003497;4.42e-07;2!UBERON:0003909;4.42e-07;2!UBERON:0003835;4.42e-07;2!UBERON:0003914;6.89e-07;74|ontology_enrichment_uberon_v019_2=UBERON:0010523,2.08e-36,3;UBERON:0001915,2.08e-36,3;UBERON:0001982,2.08e-36,3;UBERON:0010532,7.96e-27,7;UBERON:0000074,7.96e-27,7;UBERON:0001229,7.96e-27,7;UBERON:0001230,7.96e-27,7;UBERON:0003220,7.96e-27,7;UBERON:0005749,7.96e-27,7;UBERON:0004199,7.96e-27,7;UBERON:0004209,7.96e-27,7;UBERON:0004198,7.96e-27,7;UBERON:0001473,4.94e-24,8;UBERON:0004536,4.94e-24,8;UBERON:0006558,4.94e-24,8;UBERON:0005103,1.60e-23,8;UBERON:0000083,1.60e-23,8;UBERON:0009201,1.60e-23,8;UBERON:0006553,1.60e-23,8;UBERON:0003074,1.60e-23,8;UBERON:0003060,1.60e-23,8;UBERON:0000080,5.98e-21,9;UBERON:0002120,5.98e-21,9;UBERON:0004875,5.98e-21,9;UBERON:0005721,5.98e-21,9;UBERON:0005754,5.98e-21,9;UBERON:0007297,5.98e-21,9;UBERON:0000353,2.53e-19,15;UBERON:0002465,2.69e-19,10;UBERON:0004876,3.34e-17,11;UBERON:0004638,2.20e-16,18;UBERON:0001986,2.20e-16,18;UBERON:0004852,2.20e-16,18;UBERON:0000055,4.10e-16,68;UBERON:0001225,8.54e-16,12;UBERON:0008987,8.54e-16,12;UBERON:0003887,8.54e-16,12;UBERON:0000058,2.94e-15,19;UBERON:0002049,6.90e-14,78;UBERON:0007798,6.90e-14,78;UBERON:0000487,2.12e-13,22;UBERON:0001851,1.08e-12,15;UBERON:0004211,1.08e-12,15;UBERON:0009773,1.08e-12,15;UBERON:0001231,1.08e-12,15;UBERON:0001285,1.08e-12,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C328 | |||
|description=CAGE_peak_at_chr10:3477893..3477912,- | |||
|id=chr10:3477893..3477912,- | |||
|ontology_enrichment_celltype=CL:0000115!3.32e-27!35;CL:0002139!2.13e-26!24;CL:0002078!2.03e-20!44;CL:0005020!5.82e-17!6;CL:0002138!5.82e-17!6;CL:0005022!5.82e-17!6;CL:0000213!1.90e-14!57;CL:0000215!1.90e-14!57;CL:0000071!1.06e-13!18;CL:0002546!1.06e-13!18;CL:0002144!1.52e-09!3;CL:0002618!7.37e-09!3;CL:0000222!1.77e-08!119;CL:0002543!1.52e-07!6;CL:0000666!5.07e-07!4;CL:0002188!5.07e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.63e-49;36!CL:0002139;7.54e-39;24!CL:0002188;2.95e-37;5!CL:0002144;2.34e-36;3!CL:0002078;4.89e-35;45!CL:0002138;5.59e-32;6!CL:1000746;9.72e-27;7!CL:1000612;9.72e-27;7!CL:0000213;3.83e-24;58!CL:0000215;3.83e-24;58!CL:0000071;2.13e-16;18!CL:0002681;9.58e-16;12!CL:0002584;9.58e-16;12!CL:1000449;1.18e-12;15!CL:1000497;3.40e-11;17!CL:0002518;3.40e-11;17!CL:0002545;3.09e-07;2!CL:0002262;4.42e-07;2!CL:1000398;4.42e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.53e-62,36;CL:0002078,3.21e-49,45;CL:0002139,8.63e-39,24;CL:0000213,7.88e-38,58;CL:0000215,7.88e-38,58;CL:0002188,2.23e-37,5;CL:0002144,2.08e-36,3;CL:0005020,6.56e-32,6;CL:0002138,6.56e-32,6;CL:0005022,6.56e-32,6;CL:1000746,7.96e-27,7;CL:1000612,7.96e-27,7;CL:0000222,3.12e-17,121;CL:0000071,2.20e-16,18;CL:0002546,2.20e-16,18;CL:0002681,8.54e-16,12;CL:0002584,8.54e-16,12;CL:1000449,1.08e-12,15;CL:1000497,3.14e-11,17;CL:0002518,3.14e-11,17;CL:0000066,6.67e-10,253;CL:0002321,1.49e-08,250;CL:0002545,3.28e-07,2;CL:0002262,4.17e-07,2;CL:1000398,4.17e-07,2 | |||
|ontology_enrichment_development_v019=CL:0005022;5.59e-32;6!CL:0002546;2.13e-16;18!CL:0000222;7.01e-10;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!4.86e-16!69;UBERON:0001986!1.06e-13!18;UBERON:0004638!1.06e-13!18;UBERON:0004852!1.06e-13!18;UBERON:0002049!3.59e-13!79;UBERON:0007798!3.59e-13!79;UBERON:0001473!1.72e-12!8;UBERON:0004536!1.72e-12!8;UBERON:0006558!1.72e-12!8;UBERON:0000487!8.82e-11!22;UBERON:0003914!4.71e-10!118;UBERON:0002465!8.26e-10!10;UBERON:0001981!1.07e-09!60;UBERON:0007500!1.07e-09!60;UBERON:0004537!1.07e-09!60;UBERON:0006965!1.07e-09!60;UBERON:0001915!1.52e-09!3;UBERON:0001982!1.52e-09!3;UBERON:0004535!1.74e-09!110;UBERON:0006914!3.27e-09!25;UBERON:0001009!4.64e-09!113;UBERON:0000477!5.89e-09!286;UBERON:0002066!1.12e-08!5;UBERON:0004872!2.94e-08!84;UBERON:0004111!4.20e-08!241;UBERON:0001638!3.20e-07!9;UBERON:0003920!3.20e-07!9;UBERON:0004582!3.20e-07!9;UBERON:0000490!3.23e-07!138 | |||
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|short_description=p@chr10:3477893..3477912,- | |||
}} |
Revision as of 13:15, 10 September 2013
Short description: | p@chr10:3477893..3477912, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:3477893..3477912, - |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.53e-62 | 36 |
meso-epithelial cell | 3.21e-49 | 45 |
endothelial cell of vascular tree | 8.63e-39 | 24 |
lining cell | 7.88e-38 | 58 |
barrier cell | 7.88e-38 | 58 |
glomerular endothelial cell | 2.23e-37 | 5 |
capillary endothelial cell | 2.08e-36 | 3 |
lymphangioblast | 6.56e-32 | 6 |
endothelial cell of lymphatic vessel | 6.56e-32 | 6 |
vascular lymphangioblast | 6.56e-32 | 6 |
glomerular cell | 7.96e-27 | 7 |
kidney corpuscule cell | 7.96e-27 | 7 |
mesodermal cell | 3.12e-17 | 121 |
blood vessel endothelial cell | 2.20e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.20e-16 | 18 |
kidney cortical cell | 8.54e-16 | 12 |
renal cortical epithelial cell | 8.54e-16 | 12 |
epithelial cell of nephron | 1.08e-12 | 15 |
kidney cell | 3.14e-11 | 17 |
kidney epithelial cell | 3.14e-11 | 17 |
epithelial cell | 6.67e-10 | 253 |
embryonic cell | 1.49e-08 | 250 |
thoracic aorta endothelial cell | 3.28e-07 | 2 |
endothelial cell of sinusoid | 4.17e-07 | 2 |
endothelial cell of hepatic sinusoid | 4.17e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.