FFCP PHASE1:Hg19::chr10:17065639..17065653,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8029|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=2548|TSSclassifier=S|UniProt=F5H661|association_with_transcript=0bp_to_ENST00000545090_5end|description=CAGE_peak_2_at_CUBN_5end|id=chr10:17065639..17065653,-|ontology_enrichment_celltype=CL:0002057!3.45e-20!42;CL:0000860!8.20e-18!45;CL:0000766!4.30e-15!76;CL:0000557!7.42e-15!71;CL:0000839!2.00e-14!70;CL:0002194!8.35e-13!63;CL:0000576!8.35e-13!63;CL:0000040!8.35e-13!63;CL:0000559!8.35e-13!63;CL:0002009!8.64e-13!65;CL:0002031!2.64e-11!124;CL:0000738!1.24e-10!140;CL:0002087!1.76e-09!119;CL:0000763!1.68e-07!112;CL:0000049!1.68e-07!112;CL:0002139!3.02e-07!24;CL:0002032!6.76e-07!165;CL:0000837!6.76e-07!165;CL:0000037!9.99e-07!172;CL:0000566!9.99e-07!172|ontology_enrichment_celltype_v019=CL:0000860;6.09e-22;33!CL:0002057;6.09e-22;33!CL:0000473;5.64e-14;39!CL:0000234;5.64e-14;39!CL:0000576;2.05e-13;48!CL:1000413;4.90e-11;9!CL:0000766;7.89e-11;69!CL:0000767;2.44e-10;3!CL:0000623;1.14e-09;3!CL:0000071;7.49e-07;18|ontology_enrichment_celltype_v019_2=CL:0000860,1.43e-22,42;CL:0002057,1.43e-22,42;CL:0000766,2.58e-20,72;CL:0000473,4.42e-19,48;CL:0000234,4.42e-19,48;CL:0000738,4.92e-17,136;CL:0000839,6.96e-17,66;CL:0000557,1.51e-16,67;CL:0002031,3.73e-16,120;CL:0002194,3.19e-14,59;CL:0000576,3.19e-14,59;CL:0000040,3.19e-14,59;CL:0000559,3.19e-14,59;CL:0002009,1.34e-13,61;CL:0002087,1.97e-13,115;CL:0000037,4.88e-13,168;CL:0002032,5.01e-13,161;CL:0000837,5.01e-13,161;CL:0000988,6.30e-12,177;CL:0000763,2.27e-11,108;CL:0000049,2.27e-11,108;CL:1000413,5.78e-11,9;CL:0000767,2.05e-10,3;CL:0000623,7.73e-10,3;CL:0000825,7.73e-10,3;CL:0000071,9.66e-07,18;CL:0002546,9.66e-07,18|ontology_enrichment_development_v019=CL:0002057;2.03e-16;42!CL:0002546;7.49e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.47e-13!80;UBERON:0001474!1.14e-12!86;UBERON:0002193!1.59e-12!112;UBERON:0002390!2.82e-12!102;UBERON:0003061!2.82e-12!102;UBERON:0004765!1.07e-11!101;UBERON:0001434!1.07e-11!101;UBERON:0002405!2.09e-11!115;UBERON:0003081!1.65e-07!216|ontology_enrichment_uberon_v019=UBERON:0003915;4.90e-11;9!UBERON:0004700;4.90e-11;9!UBERON:0001917;4.90e-11;9!UBERON:0004638;7.49e-07;18!UBERON:0001986;7.49e-07;18!UBERON:0004852;7.49e-07;18!UBERON:0000007;9.53e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.68e-15,76;UBERON:0001474,9.56e-14,82;UBERON:0002405,1.28e-12,93;UBERON:0004765,5.27e-12,90;UBERON:0002390,1.15e-11,98;UBERON:0003061,1.15e-11,98;UBERON:0003915,5.78e-11,9;UBERON:0004700,5.78e-11,9;UBERON:0001917,5.78e-11,9;UBERON:0001434,3.14e-10,100;UBERON:0002193,4.92e-10,108;UBERON:0003081,4.61e-09,203;UBERON:0004638,9.66e-07,18;UBERON:0001986,9.66e-07,18;UBERON:0004852,9.66e-07,18|phase1_expression=0.181678379270557,0.642301571672949,0.986680828671798,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,1.43117993565528,0.136874425072884,0.376627918784408,0,0,0,5.90046415273356,3.45446458287491,2.47705797305722,0,0,0,0,0,1.17440175733939,1.10799081706375,0.601633342410425,1.30206522429511,0,0,0,1.01778767145695,1.51150377475524,0.242584061187816,0.697287110717054,0.822335776043652,0.929119112685311,1.43846196161075,4.35473201099471,2.60130452877444,2.41321976515633,0,2.70852973188684,0.941211697713023,1.91034305040492,0.898893937780338,1.22433556948361,1.28371610830437,1.91801137739712,0.659702600373432,0.997318288108159,0.426224750532694,3.19230162491442,1.13477044938228,0,3.51748131359441,3.65038042894141,2.82345498116652,0.605399502633369,4.41933163185078,1.26584954976354,0,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0,0.285012743741249,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.764546456250458,0,1.12101712596307,0.263384084775077,1.57367816091066,1.17903228824749,0.822405995998037,0,0.32592226663359,0,0,0,0,0.221533894583621,0,0,0,0,0,0.579606171470105,0.444859689486181,0.267540828089713,0,0.113309342697566,1.53288197440768,0.34362744548263,0.506039384039006,0,0.651083453856419,0,0,0,0,0,0,5.44338206706778,2.13952156626806,1.30341963494519,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0.567208902984407,0.665188192387692,0.175669571386252,0.130979075497713,0,0,0.324547393654683,0,0.132957960518865,0,0,0,1.39133685156694,2.58070378531837,2.42998351125316,0,2.09749718104953,1.10047216776027,1.46296476575767,0.258416759169329,0.71153252537342,0.66944122552934,0.402829317109147,0,0.488124115096339,0.735326160691737,0,1.07159673940896,0.22452937262617,0.225222960966644,0,0,0.732806975721629,0,0,0,0,0,0.264818361626438,0,0.354668382198357,0,0,0,1.8672662123986,0.134710672069688,0.653847612453835,0.151357427644931,0,0,1.24864030732128,1.1409436430889,0.448346041655403,0,0.161872944368132,0.140450806702248,0.61246251376468,0.491337269247072,0.413303124703062,2.37600571456411,0,0,0,0.673344455816265,0.375355559615893,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8029 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2548 | |||
|TSSclassifier=S | |||
|UniProt=F5H661 | |||
|association_with_transcript=0bp_to_ENST00000545090_5end | |||
|description=CAGE_peak_2_at_CUBN_5end | |||
|id=chr10:17065639..17065653,- | |||
|ontology_enrichment_celltype=CL:0002057!3.45e-20!42;CL:0000860!8.20e-18!45;CL:0000766!4.30e-15!76;CL:0000557!7.42e-15!71;CL:0000839!2.00e-14!70;CL:0002194!8.35e-13!63;CL:0000576!8.35e-13!63;CL:0000040!8.35e-13!63;CL:0000559!8.35e-13!63;CL:0002009!8.64e-13!65;CL:0002031!2.64e-11!124;CL:0000738!1.24e-10!140;CL:0002087!1.76e-09!119;CL:0000763!1.68e-07!112;CL:0000049!1.68e-07!112;CL:0002139!3.02e-07!24;CL:0002032!6.76e-07!165;CL:0000837!6.76e-07!165;CL:0000037!9.99e-07!172;CL:0000566!9.99e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.09e-22;33!CL:0002057;6.09e-22;33!CL:0000473;5.64e-14;39!CL:0000234;5.64e-14;39!CL:0000576;2.05e-13;48!CL:1000413;4.90e-11;9!CL:0000766;7.89e-11;69!CL:0000767;2.44e-10;3!CL:0000623;1.14e-09;3!CL:0000071;7.49e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.43e-22,42;CL:0002057,1.43e-22,42;CL:0000766,2.58e-20,72;CL:0000473,4.42e-19,48;CL:0000234,4.42e-19,48;CL:0000738,4.92e-17,136;CL:0000839,6.96e-17,66;CL:0000557,1.51e-16,67;CL:0002031,3.73e-16,120;CL:0002194,3.19e-14,59;CL:0000576,3.19e-14,59;CL:0000040,3.19e-14,59;CL:0000559,3.19e-14,59;CL:0002009,1.34e-13,61;CL:0002087,1.97e-13,115;CL:0000037,4.88e-13,168;CL:0002032,5.01e-13,161;CL:0000837,5.01e-13,161;CL:0000988,6.30e-12,177;CL:0000763,2.27e-11,108;CL:0000049,2.27e-11,108;CL:1000413,5.78e-11,9;CL:0000767,2.05e-10,3;CL:0000623,7.73e-10,3;CL:0000825,7.73e-10,3;CL:0000071,9.66e-07,18;CL:0002546,9.66e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;2.03e-16;42!CL:0002546;7.49e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.47e-13!80;UBERON:0001474!1.14e-12!86;UBERON:0002193!1.59e-12!112;UBERON:0002390!2.82e-12!102;UBERON:0003061!2.82e-12!102;UBERON:0004765!1.07e-11!101;UBERON:0001434!1.07e-11!101;UBERON:0002405!2.09e-11!115;UBERON:0003081!1.65e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;4.90e-11;9!UBERON:0004700;4.90e-11;9!UBERON:0001917;4.90e-11;9!UBERON:0004638;7.49e-07;18!UBERON:0001986;7.49e-07;18!UBERON:0004852;7.49e-07;18!UBERON:0000007;9.53e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.68e-15,76;UBERON:0001474,9.56e-14,82;UBERON:0002405,1.28e-12,93;UBERON:0004765,5.27e-12,90;UBERON:0002390,1.15e-11,98;UBERON:0003061,1.15e-11,98;UBERON:0003915,5.78e-11,9;UBERON:0004700,5.78e-11,9;UBERON:0001917,5.78e-11,9;UBERON:0001434,3.14e-10,100;UBERON:0002193,4.92e-10,108;UBERON:0003081,4.61e-09,203;UBERON:0004638,9.66e-07,18;UBERON:0001986,9.66e-07,18;UBERON:0004852,9.66e-07,18 | |||
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| |||
|short_description=p2@CUBN | |||
}} |
Revision as of 12:38, 10 September 2013
Short description: | p2@CUBN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CUBN_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000545090_5end |
EntrezGene: | CUBN |
HGNC: | 2548 |
UniProt: | F5H661 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.43e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.43e-22 | 42 |
myeloid leukocyte | 2.58e-20 | 72 |
defensive cell | 4.42e-19 | 48 |
phagocyte | 4.42e-19 | 48 |
leukocyte | 4.92e-17 | 136 |
myeloid lineage restricted progenitor cell | 6.96e-17 | 66 |
granulocyte monocyte progenitor cell | 1.51e-16 | 67 |
hematopoietic lineage restricted progenitor cell | 3.73e-16 | 120 |
monopoietic cell | 3.19e-14 | 59 |
monocyte | 3.19e-14 | 59 |
monoblast | 3.19e-14 | 59 |
promonocyte | 3.19e-14 | 59 |
macrophage dendritic cell progenitor | 1.34e-13 | 61 |
nongranular leukocyte | 1.97e-13 | 115 |
hematopoietic stem cell | 4.88e-13 | 168 |
hematopoietic oligopotent progenitor cell | 5.01e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.01e-13 | 161 |
hematopoietic cell | 6.30e-12 | 177 |
myeloid cell | 2.27e-11 | 108 |
common myeloid progenitor | 2.27e-11 | 108 |
endothelial cell of artery | 5.78e-11 | 9 |
basophil | 2.05e-10 | 3 |
natural killer cell | 7.73e-10 | 3 |
pro-NK cell | 7.73e-10 | 3 |
blood vessel endothelial cell | 9.66e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.66e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.68e-15 | 76 |
bone element | 9.56e-14 | 82 |
immune system | 1.28e-12 | 93 |
skeletal element | 5.27e-12 | 90 |
hematopoietic system | 1.15e-11 | 98 |
blood island | 1.15e-11 | 98 |
endothelial tube | 5.78e-11 | 9 |
arterial system endothelium | 5.78e-11 | 9 |
endothelium of artery | 5.78e-11 | 9 |
skeletal system | 3.14e-10 | 100 |
hemolymphoid system | 4.92e-10 | 108 |
lateral plate mesoderm | 4.61e-09 | 203 |
blood vessel endothelium | 9.66e-07 | 18 |
endothelium | 9.66e-07 | 18 |
cardiovascular system endothelium | 9.66e-07 | 18 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.