FFCP PHASE1:Hg19::chr11:35019667..35019690,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:35019667..35019690,+|id=chr11:35019667..35019690,+|ontology_enrichment_celltype=CL:0002057!3.63e-35!42;CL:0000860!5.32e-34!45;CL:0002009!1.62e-29!65;CL:0002194!6.99e-29!63;CL:0000576!6.99e-29!63;CL:0000040!6.99e-29!63;CL:0000559!6.99e-29!63;CL:0000557!1.90e-27!71;CL:0000766!2.63e-26!76;CL:0000839!3.07e-26!70;CL:0000763!2.65e-19!112;CL:0000049!2.65e-19!112;CL:0002031!1.86e-16!124;CL:0002087!1.02e-15!119;CL:0000738!8.22e-15!140;CL:0002032!1.19e-13!165;CL:0000837!1.19e-13!165;CL:0000037!1.66e-12!172;CL:0000566!1.66e-12!172;CL:0000988!4.77e-11!182|ontology_enrichment_celltype_v019=CL:0000860;4.42e-61;33!CL:0002057;4.42e-61;33!CL:0000473;1.56e-41;39!CL:0000234;1.56e-41;39!CL:0000576;6.02e-26;48!CL:0000766;1.58e-14;69!CL:0000763;1.50e-10;100!CL:0002087;2.31e-09;104!CL:0002379;3.12e-09;1|ontology_enrichment_celltype_v019_2=CL:0000860,1.02e-51,42;CL:0002057,1.02e-51,42;CL:0000473,6.84e-45,48;CL:0000234,6.84e-45,48;CL:0002009,2.45e-38,61;CL:0002194,2.50e-35,59;CL:0000576,2.50e-35,59;CL:0000040,2.50e-35,59;CL:0000559,2.50e-35,59;CL:0000557,1.11e-34,67;CL:0000839,2.50e-31,66;CL:0000766,1.64e-28,72;CL:0000763,4.16e-23,108;CL:0000049,4.16e-23,108;CL:0002031,4.12e-18,120;CL:0002087,8.00e-17,115;CL:0000738,1.27e-15,136;CL:0002032,1.87e-14,161;CL:0000837,1.87e-14,161;CL:0000037,1.02e-13,168;CL:0000988,7.51e-13,177;CL:0002379,2.16e-09,1|ontology_enrichment_development_v019=CL:0002057;2.61e-40;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3620;3.12e-09;1!DOID:3565;3.12e-09;1|ontology_enrichment_disease_v019_2=DOID:3620,2.16e-09,1;DOID:3565,2.16e-09,1|ontology_enrichment_uberon=UBERON:0002371!7.00e-26!80;UBERON:0001474!3.65e-23!86;UBERON:0004765!5.64e-20!101;UBERON:0001434!5.64e-20!101;UBERON:0002390!1.19e-19!102;UBERON:0003061!1.19e-19!102;UBERON:0002405!7.05e-17!115;UBERON:0002193!9.83e-17!112;UBERON:0002204!1.83e-08!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.89e-30,76;UBERON:0001474,7.48e-28,82;UBERON:0004765,3.96e-25,90;UBERON:0002405,3.17e-24,93;UBERON:0002390,7.65e-23,98;UBERON:0003061,7.65e-23,98;UBERON:0001434,2.50e-22,100;UBERON:0002193,1.86e-20,108;UBERON:0002204,3.82e-12,167;UBERON:0003081,1.99e-09,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0.767658796194425,0.309632246632152,0,0,0,0,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,1.39457422143411,0.411167888021826,2.16794459626573,0.575384784644301,1.5369642391746,1.18241114944293,0.689491361473237,1.29096936716765,2.70852973188684,0.752969358170419,1.63743690034707,1.79778787556068,0.918251677112708,1.60464513538047,1.27867425159808,0,0.199463657621632,0.426224750532694,2.32167390902867,1.13477044938228,3.73693349397345,0.251248665256743,0,1.95469960234605,1.21079900526674,1.47311054395026,5.06339819905415,0,0,0,0,0.150176892841506,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0.324547393654683,0.696518949197069,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0.412210116953756,0,0,0,0.0974370051611986,0,0.0920498986422993,0.646584227275248,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,5.08016598537319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99921590399346,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.364909578431332,0.19566461893209,1.94224303627274,0,0,0,0,0,0,0.664653872707185,0,0.313932918407225,0,0,0.416024019039416,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0,0,0,2.05562886970126,0.397429223405979,0.0633107959558787,0,0.160317640503067,0,0,4.17862209746907,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:35019667..35019690,+ | |||
|id=chr11:35019667..35019690,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.63e-35!42;CL:0000860!5.32e-34!45;CL:0002009!1.62e-29!65;CL:0002194!6.99e-29!63;CL:0000576!6.99e-29!63;CL:0000040!6.99e-29!63;CL:0000559!6.99e-29!63;CL:0000557!1.90e-27!71;CL:0000766!2.63e-26!76;CL:0000839!3.07e-26!70;CL:0000763!2.65e-19!112;CL:0000049!2.65e-19!112;CL:0002031!1.86e-16!124;CL:0002087!1.02e-15!119;CL:0000738!8.22e-15!140;CL:0002032!1.19e-13!165;CL:0000837!1.19e-13!165;CL:0000037!1.66e-12!172;CL:0000566!1.66e-12!172;CL:0000988!4.77e-11!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.42e-61;33!CL:0002057;4.42e-61;33!CL:0000473;1.56e-41;39!CL:0000234;1.56e-41;39!CL:0000576;6.02e-26;48!CL:0000766;1.58e-14;69!CL:0000763;1.50e-10;100!CL:0002087;2.31e-09;104!CL:0002379;3.12e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.02e-51,42;CL:0002057,1.02e-51,42;CL:0000473,6.84e-45,48;CL:0000234,6.84e-45,48;CL:0002009,2.45e-38,61;CL:0002194,2.50e-35,59;CL:0000576,2.50e-35,59;CL:0000040,2.50e-35,59;CL:0000559,2.50e-35,59;CL:0000557,1.11e-34,67;CL:0000839,2.50e-31,66;CL:0000766,1.64e-28,72;CL:0000763,4.16e-23,108;CL:0000049,4.16e-23,108;CL:0002031,4.12e-18,120;CL:0002087,8.00e-17,115;CL:0000738,1.27e-15,136;CL:0002032,1.87e-14,161;CL:0000837,1.87e-14,161;CL:0000037,1.02e-13,168;CL:0000988,7.51e-13,177;CL:0002379,2.16e-09,1 | |||
|ontology_enrichment_development_v019=CL:0002057;2.61e-40;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;3.12e-09;1!DOID:3565;3.12e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,2.16e-09,1;DOID:3565,2.16e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!7.00e-26!80;UBERON:0001474!3.65e-23!86;UBERON:0004765!5.64e-20!101;UBERON:0001434!5.64e-20!101;UBERON:0002390!1.19e-19!102;UBERON:0003061!1.19e-19!102;UBERON:0002405!7.05e-17!115;UBERON:0002193!9.83e-17!112;UBERON:0002204!1.83e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.89e-30,76;UBERON:0001474,7.48e-28,82;UBERON:0004765,3.96e-25,90;UBERON:0002405,3.17e-24,93;UBERON:0002390,7.65e-23,98;UBERON:0003061,7.65e-23,98;UBERON:0001434,2.50e-22,100;UBERON:0002193,1.86e-20,108;UBERON:0002204,3.82e-12,167;UBERON:0003081,1.99e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0.767658796194425,0.309632246632152,0,0,0,0,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,1.39457422143411,0.411167888021826,2.16794459626573,0.575384784644301,1.5369642391746,1.18241114944293,0.689491361473237,1.29096936716765,2.70852973188684,0.752969358170419,1.63743690034707,1.79778787556068,0.918251677112708,1.60464513538047,1.27867425159808,0,0.199463657621632,0.426224750532694,2.32167390902867,1.13477044938228,3.73693349397345,0.251248665256743,0,1.95469960234605,1.21079900526674,1.47311054395026,5.06339819905415,0,0,0,0,0.150176892841506,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0.324547393654683,0.696518949197069,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0.412210116953756,0,0,0,0.0974370051611986,0,0.0920498986422993,0.646584227275248,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,5.08016598537319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99921590399346,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.364909578431332,0.19566461893209,1.94224303627274,0,0,0,0,0,0,0.664653872707185,0,0.313932918407225,0,0,0.416024019039416,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0,0,0,2.05562886970126,0.397429223405979,0.0633107959558787,0,0.160317640503067,0,0,4.17862209746907,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0.795229689809303,0,0,0,0,1.1248694577575,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0.653174720218818,0,0.246277562248017,0.170388021785422,0,0,0,0,0.26446520348538,0,0.704815022316672,0,0,0,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,1.6468607378872,0,0,0.149254802886874,0,0.554805861502613,0,0,0.889811221596536,0,0,0.310874401165561,0,0,0,0,0.414706207840855,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0.926404341482917,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0.172214979660816,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0.319267718114302,0,0,0,0.161475645631851,0,0.0981477185010256,0.11796972334774,0,0.346576998451015,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,1.04617282831313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87671699929078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0.0644578879735772,0.399764623699716,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0.320568492303233 | |||
|short_description=p@chr11:35019667..35019690,+ | |||
}} |
Revision as of 17:34, 10 September 2013
Short description: | p@chr11:35019667..35019690, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:35019667..35019690, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.02e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.02e-51 | 42 |
defensive cell | 6.84e-45 | 48 |
phagocyte | 6.84e-45 | 48 |
macrophage dendritic cell progenitor | 2.45e-38 | 61 |
monopoietic cell | 2.50e-35 | 59 |
monocyte | 2.50e-35 | 59 |
monoblast | 2.50e-35 | 59 |
promonocyte | 2.50e-35 | 59 |
granulocyte monocyte progenitor cell | 1.11e-34 | 67 |
myeloid lineage restricted progenitor cell | 2.50e-31 | 66 |
myeloid leukocyte | 1.64e-28 | 72 |
myeloid cell | 4.16e-23 | 108 |
common myeloid progenitor | 4.16e-23 | 108 |
hematopoietic lineage restricted progenitor cell | 4.12e-18 | 120 |
nongranular leukocyte | 8.00e-17 | 115 |
leukocyte | 1.27e-15 | 136 |
hematopoietic oligopotent progenitor cell | 1.87e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.87e-14 | 161 |
hematopoietic stem cell | 1.02e-13 | 168 |
hematopoietic cell | 7.51e-13 | 177 |
meningothelial cell | 2.16e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.89e-30 | 76 |
bone element | 7.48e-28 | 82 |
skeletal element | 3.96e-25 | 90 |
immune system | 3.17e-24 | 93 |
hematopoietic system | 7.65e-23 | 98 |
blood island | 7.65e-23 | 98 |
skeletal system | 2.50e-22 | 100 |
hemolymphoid system | 1.86e-20 | 108 |
musculoskeletal system | 3.82e-12 | 167 |
lateral plate mesoderm | 1.99e-09 | 203 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 2.16e-09 | 1 |
meningioma | 2.16e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.