FFCP PHASE1:Hg19::chr11:57194506..57194517,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29015|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17466|TSSclassifier=S|UniProt=E9PS74|association_with_transcript=0bp_to_ENST00000530005,ENST00000532278_5end|description=CAGE_peak_5_at_SLC43A3_5end|id=chr11:57194506..57194517,-|ontology_enrichment_celltype=CL:0000037!6.03e-35!172;CL:0000566!6.03e-35!172;CL:0000988!5.48e-34!182;CL:0002032!9.07e-33!165;CL:0000837!9.07e-33!165;CL:0000763!1.93e-28!112;CL:0000049!1.93e-28!112;CL:0000738!5.35e-21!140;CL:0002031!8.72e-20!124;CL:0002057!5.37e-18!42;CL:0002087!1.89e-17!119;CL:0000219!3.79e-16!390;CL:0000557!5.51e-16!71;CL:0000839!6.60e-16!70;CL:0000766!8.28e-16!76;CL:0000860!2.53e-15!45;CL:0000134!9.16e-15!358;CL:0002320!3.39e-14!365;CL:0002009!1.39e-13!65;CL:0002194!4.92e-13!63;CL:0000576!4.92e-13!63;CL:0000040!4.92e-13!63;CL:0000559!4.92e-13!63;CL:0000034!1.46e-11!444;CL:0000048!1.79e-11!430;CL:0000723!2.82e-11!436;CL:0000063!5.47e-09!578;CL:0002371!1.16e-08!591;CL:0000012!6.93e-08!682;CL:0000548!1.88e-07!679;CL:0000004!1.88e-07!679;CL:0000255!1.88e-07!679;CL:0000144!3.36e-07!625|ontology_enrichment_celltype_v019=CL:0000860;1.89e-19;33!CL:0002057;1.89e-19;33!CL:0000473;1.65e-16;39!CL:0000234;1.65e-16;39!CL:0000763;3.86e-14;100!CL:0000576;7.55e-11;48!CL:0000766;8.77e-10;69!CL:0000988;2.12e-07;177!CL:0002087;3.45e-07;104|ontology_enrichment_celltype_v019_2=CL:0000037,1.52e-41,168;CL:0000988,1.93e-41,177;CL:0002032,4.61e-41,161;CL:0000837,4.61e-41,161;CL:0000763,1.79e-38,108;CL:0000049,1.79e-38,108;CL:0000738,2.34e-22,136;CL:0002031,9.99e-22,120;CL:0000473,7.97e-21,48;CL:0000234,7.97e-21,48;CL:0000860,2.88e-20,42;CL:0002057,2.88e-20,42;CL:0000839,1.10e-19,66;CL:0000766,3.19e-19,72;CL:0002087,3.40e-19,115;CL:0000557,5.34e-19,67;CL:0002009,1.27e-16,61;CL:0002194,1.65e-16,59;CL:0000576,1.65e-16,59;CL:0000040,1.65e-16,59;CL:0000559,1.65e-16,59;CL:0000219,8.91e-15,386;CL:0000134,7.78e-14,354;CL:0002320,5.48e-13,361;CL:0000034,1.23e-09,441;CL:0000048,1.27e-09,427;CL:0000723,1.87e-09,433|ontology_enrichment_development_v019=CL:0002057;1.45e-15;42!CL:0000049;1.11e-10;108|ontology_enrichment_disease=DOID:2531!1.66e-19!51;DOID:0060083!1.66e-19!51;DOID:1240!6.89e-17!39;DOID:8692!2.22e-13!31|ontology_enrichment_disease_v019=DOID:1240;1.44e-19;39!DOID:8692;2.25e-18;31!DOID:2531;7.32e-14;51!DOID:0060083;7.32e-14;51!DOID:1036;1.75e-08;8|ontology_enrichment_disease_v019_2=DOID:1240,1.10e-24,39;DOID:2531,1.16e-23,51;DOID:0060083,1.16e-23,51;DOID:8692,1.14e-18,31;DOID:1036,6.36e-08,8|ontology_enrichment_uberon=UBERON:0002390!4.66e-16!102;UBERON:0003061!4.66e-16!102;UBERON:0002193!8.42e-16!112;UBERON:0002371!5.88e-15!80;UBERON:0002384!3.81e-14!375;UBERON:0001474!5.51e-13!86;UBERON:0002405!1.97e-11!115;UBERON:0004765!1.96e-09!101;UBERON:0001434!1.96e-09!101;UBERON:0003081!1.87e-07!216;UBERON:0001737!7.99e-07!9|ontology_enrichment_uberon_v019=UBERON:0001737;5.29e-11;9!UBERON:0001557;5.29e-11;9|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.21e-17,76;UBERON:0002390,3.33e-15,98;UBERON:0003061,3.33e-15,98;UBERON:0001474,8.26e-15,82;UBERON:0002405,5.00e-14,93;UBERON:0002384,2.85e-13,371;UBERON:0002193,3.56e-13,108;UBERON:0004765,2.25e-12,90;UBERON:0001737,4.17e-11,9;UBERON:0001434,1.60e-10,100|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.245733936501509,2.79120467188971,0,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0,0,0,0,0.572471974262113,0.273748850145768,0,2.52164238968239,2.8735206307481,2.83358812729245,1.57345710739562,0.767658796194425,2.16742572642506,0.919421224478927,0.90361775633475,0,1.93668001450754,1.9903692548239,0.880801318004542,1.66198622559563,3.20871115952227,1.51907609501096,0,0,0,3.48955773070955,4.53451132426571,1.21292030593908,4.18372266430232,3.70051099219643,4.33588919253145,1.7261543539329,1.0246428261164,0.47296445977717,4.48169384957604,2.5819387343353,2.70852973188684,3.9530891303947,2.72906150057846,2.9214052977861,3.97909060082173,2.24650318953266,1.91801137739712,0.989553900560148,1.79517291859469,0.852449501065388,3.77272010217159,1.70215567407342,3.73693349397345,1.00499466102697,3.12889751052121,1.3031330682307,3.63239701580021,3.68277635987565,4.1140110367315,0.633765858935825,1.27562579979026,0.628975936525128,0.673971786878971,0.450530678524519,0.64290234678832,0.285012743741249,0.59675003159727,0.365328307529268,1.75996244461323,1.09227722252426,0,0,0.400395987036012,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0,0,3.36305137788922,1.84368859342554,0.786839080455332,0.786021525498329,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0.541607727530031,0,0.130059347559878,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0.602300476311091,0.383959833463255,0,0.947109008176067,0,0.201606743224732,0.802320587350522,0.289648807765598,0,0,0.383587685530591,0.361439152384566,0.50133791063589,0.289693037921647,0,0,0.0945348171640679,0,0.175669571386252,0.261958150995425,0,1.48313777113772,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=29015 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17466 | |||
|TSSclassifier=S | |||
|UniProt=E9PS74 | |||
|association_with_transcript=0bp_to_ENST00000530005,ENST00000532278_5end | |||
|description=CAGE_peak_5_at_SLC43A3_5end | |||
|id=chr11:57194506..57194517,- | |||
|ontology_enrichment_celltype=CL:0000037!6.03e-35!172;CL:0000566!6.03e-35!172;CL:0000988!5.48e-34!182;CL:0002032!9.07e-33!165;CL:0000837!9.07e-33!165;CL:0000763!1.93e-28!112;CL:0000049!1.93e-28!112;CL:0000738!5.35e-21!140;CL:0002031!8.72e-20!124;CL:0002057!5.37e-18!42;CL:0002087!1.89e-17!119;CL:0000219!3.79e-16!390;CL:0000557!5.51e-16!71;CL:0000839!6.60e-16!70;CL:0000766!8.28e-16!76;CL:0000860!2.53e-15!45;CL:0000134!9.16e-15!358;CL:0002320!3.39e-14!365;CL:0002009!1.39e-13!65;CL:0002194!4.92e-13!63;CL:0000576!4.92e-13!63;CL:0000040!4.92e-13!63;CL:0000559!4.92e-13!63;CL:0000034!1.46e-11!444;CL:0000048!1.79e-11!430;CL:0000723!2.82e-11!436;CL:0000063!5.47e-09!578;CL:0002371!1.16e-08!591;CL:0000012!6.93e-08!682;CL:0000548!1.88e-07!679;CL:0000004!1.88e-07!679;CL:0000255!1.88e-07!679;CL:0000144!3.36e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.89e-19;33!CL:0002057;1.89e-19;33!CL:0000473;1.65e-16;39!CL:0000234;1.65e-16;39!CL:0000763;3.86e-14;100!CL:0000576;7.55e-11;48!CL:0000766;8.77e-10;69!CL:0000988;2.12e-07;177!CL:0002087;3.45e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.52e-41,168;CL:0000988,1.93e-41,177;CL:0002032,4.61e-41,161;CL:0000837,4.61e-41,161;CL:0000763,1.79e-38,108;CL:0000049,1.79e-38,108;CL:0000738,2.34e-22,136;CL:0002031,9.99e-22,120;CL:0000473,7.97e-21,48;CL:0000234,7.97e-21,48;CL:0000860,2.88e-20,42;CL:0002057,2.88e-20,42;CL:0000839,1.10e-19,66;CL:0000766,3.19e-19,72;CL:0002087,3.40e-19,115;CL:0000557,5.34e-19,67;CL:0002009,1.27e-16,61;CL:0002194,1.65e-16,59;CL:0000576,1.65e-16,59;CL:0000040,1.65e-16,59;CL:0000559,1.65e-16,59;CL:0000219,8.91e-15,386;CL:0000134,7.78e-14,354;CL:0002320,5.48e-13,361;CL:0000034,1.23e-09,441;CL:0000048,1.27e-09,427;CL:0000723,1.87e-09,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.45e-15;42!CL:0000049;1.11e-10;108 | |||
|ontology_enrichment_disease=DOID:2531!1.66e-19!51;DOID:0060083!1.66e-19!51;DOID:1240!6.89e-17!39;DOID:8692!2.22e-13!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.44e-19;39!DOID:8692;2.25e-18;31!DOID:2531;7.32e-14;51!DOID:0060083;7.32e-14;51!DOID:1036;1.75e-08;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.10e-24,39;DOID:2531,1.16e-23,51;DOID:0060083,1.16e-23,51;DOID:8692,1.14e-18,31;DOID:1036,6.36e-08,8 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.66e-16!102;UBERON:0003061!4.66e-16!102;UBERON:0002193!8.42e-16!112;UBERON:0002371!5.88e-15!80;UBERON:0002384!3.81e-14!375;UBERON:0001474!5.51e-13!86;UBERON:0002405!1.97e-11!115;UBERON:0004765!1.96e-09!101;UBERON:0001434!1.96e-09!101;UBERON:0003081!1.87e-07!216;UBERON:0001737!7.99e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.29e-11;9!UBERON:0001557;5.29e-11;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.21e-17,76;UBERON:0002390,3.33e-15,98;UBERON:0003061,3.33e-15,98;UBERON:0001474,8.26e-15,82;UBERON:0002405,5.00e-14,93;UBERON:0002384,2.85e-13,371;UBERON:0002193,3.56e-13,108;UBERON:0004765,2.25e-12,90;UBERON:0001737,4.17e-11,9;UBERON:0001434,1.60e-10,100 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.245733936501509,2.79120467188971,0,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0,0,0,0,0.572471974262113,0.273748850145768,0,2.52164238968239,2.8735206307481,2.83358812729245,1.57345710739562,0.767658796194425,2.16742572642506,0.919421224478927,0.90361775633475,0,1.93668001450754,1.9903692548239,0.880801318004542,1.66198622559563,3.20871115952227,1.51907609501096,0,0,0,3.48955773070955,4.53451132426571,1.21292030593908,4.18372266430232,3.70051099219643,4.33588919253145,1.7261543539329,1.0246428261164,0.47296445977717,4.48169384957604,2.5819387343353,2.70852973188684,3.9530891303947,2.72906150057846,2.9214052977861,3.97909060082173,2.24650318953266,1.91801137739712,0.989553900560148,1.79517291859469,0.852449501065388,3.77272010217159,1.70215567407342,3.73693349397345,1.00499466102697,3.12889751052121,1.3031330682307,3.63239701580021,3.68277635987565,4.1140110367315,0.633765858935825,1.27562579979026,0.628975936525128,0.673971786878971,0.450530678524519,0.64290234678832,0.285012743741249,0.59675003159727,0.365328307529268,1.75996244461323,1.09227722252426,0,0,0.400395987036012,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0,0,3.36305137788922,1.84368859342554,0.786839080455332,0.786021525498329,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0.541607727530031,0,0.130059347559878,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0.602300476311091,0.383959833463255,0,0.947109008176067,0,0.201606743224732,0.802320587350522,0.289648807765598,0,0,0.383587685530591,0.361439152384566,0.50133791063589,0.289693037921647,0,0,0.0945348171640679,0,0.175669571386252,0.261958150995425,0,1.48313777113772,0,0.522389211897802,0.398873881556595,1.43094374583205,2.28797964312051,1.85728750664782,0.596287222100115,0.860234595106124,2.08284300964557,0,0.419499436209906,0.550236083880135,1.04497483268405,0.775250277507987,0,0,1.61131726843659,0,0.732186172644509,0.735326160691737,0.81014194788176,0.803697554556718,1.79623498100936,1.35133776579987,1.53316637465883,0,0.732806975721629,3.9534125230819,3.87780264148325,0,0.496971951695318,0,0.397227542439656,0,0.354668382198357,0,0,0.24666754841716,0.933633106199299,0.269421344139376,0.490385709340376,0.302714855289863,0,0.70296429550139,1.5608003841516,0.570471821544449,0.298897361103602,1.05691048779388,0.323745888736263,0.140450806702248,0.408308342509787,0.122834317311768,0.206651562351531,1.18800285728205,0.247266929278557,0,0.718618141816238,0.336672227908132,0.250237039743928,0,0,0,0.300476117813194,0.340296549480063,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0,0.194874010322397,0,0.0920498986422993,0.161646056818812,0,0.201504196455281,0.508681776931463,0.193260853163297,0.272746120590835,0.286804595389004,0.243947412259191,0.265059536642971,0.232387885739037,0.207322110030741,0,0,1.56449532329816,0,0,0.464367928031979,0,3.43089720115547,3.70886318171824,2.16909926895134,3.08823123650703,2.61455332910887,1.89816495288877,4.04493924480493,2.74710051175484,5.00171304030308,0,0,0.4115740113314,0,0,0.982827216677626,0,0.882926198829301,0,0.343135620597051,0.109750285408626,0,1.20634766893957,0,0.651616610620649,1.03993478527958,0,0,0,1.29929802984966,0.462985512576611,0.190254152234598,0,0,0.492434012174795,1.8720341211139,2.67536092119711,0,0,0,0.179117045405697,0.581267877027924,0.383382679165211,0.985326475791887,0.528290604079356,3.93923419527467,2.01767934783746,2.65109110195398,3.93686944611448,3.05590740446622,4.68869788840188,6.84289784090821,2.15937734676979,2.40274446275134,0.857479297891735,0.112131084345361,0,0.36669142910475,0.387815147273333,3.57656445851882,0.845302752556,0,0,0.771622122786426,0,1.0656887160644,0.428933980974443,0,0.823240336780769,0,0,0.791951872933429,0,0,0.099972991182057,3.64871341923571,0,0,0,0,0,0.434343920002738,0.410952645100767,0.537182889719687,5.04383147970873,0.197030760201927,1.94064817373566,0.641715181398742,0,0,0,0.335032530668698,0,0,0,0.414415513436035,0.36807447515742,0,0.271265023699736,0.207970861530807,0,0,0.234282829985426,0.902838299183157,0,0,0.664225598535437,0,0.173767228936166,0.391602314925481,0,0.206768026122887,0.862856803274467,1.17400313583789,0,0,0,0.248107807818777,0,0,0,0,0,0,0.308419387605311,1.06537035187876,0.246381468041427,1.03850885836724,0.464841513839837,0,0,0.0920809889358963,0.114814448164607,0,0,0.451199612907412,0.0770153371044148,0,0,0.211103257785751,2.27466768141793,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0.509752546090077,0,0.895499018888713,3.72741790298089,3.66009631434861,0,0.656029291399411,0,0.721287081534056,0.0915694648183434,0,0,0,0,0.193341436584244,0.308097234229289,1.07452572308291,1.24052915236078,1.50388342815583,1.16013355131383,0.93749290157711,0,0,0.192190067365106,0,0,0,0,0,0,1.06461206063404,0,0,0.143124886741991,0.744316738719335,0,0.190630193923825,0.255897791311334,0,0.636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| |||
|short_description=p5@SLC43A3 | |||
}} |
Revision as of 18:09, 10 September 2013
Short description: | p5@SLC43A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SLC43A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000530005, ENST00000532278_5end |
EntrezGene: | SLC43A3 |
HGNC: | 17466 |
UniProt: | E9PS74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.52e-41 | 168 |
hematopoietic cell | 1.93e-41 | 177 |
hematopoietic oligopotent progenitor cell | 4.61e-41 | 161 |
hematopoietic multipotent progenitor cell | 4.61e-41 | 161 |
myeloid cell | 1.79e-38 | 108 |
common myeloid progenitor | 1.79e-38 | 108 |
leukocyte | 2.34e-22 | 136 |
hematopoietic lineage restricted progenitor cell | 9.99e-22 | 120 |
defensive cell | 7.97e-21 | 48 |
phagocyte | 7.97e-21 | 48 |
classical monocyte | 2.88e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.88e-20 | 42 |
myeloid lineage restricted progenitor cell | 1.10e-19 | 66 |
myeloid leukocyte | 3.19e-19 | 72 |
nongranular leukocyte | 3.40e-19 | 115 |
granulocyte monocyte progenitor cell | 5.34e-19 | 67 |
macrophage dendritic cell progenitor | 1.27e-16 | 61 |
monopoietic cell | 1.65e-16 | 59 |
monocyte | 1.65e-16 | 59 |
monoblast | 1.65e-16 | 59 |
promonocyte | 1.65e-16 | 59 |
motile cell | 8.91e-15 | 386 |
mesenchymal cell | 7.78e-14 | 354 |
connective tissue cell | 5.48e-13 | 361 |
stem cell | 1.23e-09 | 441 |
multi fate stem cell | 1.27e-09 | 427 |
somatic stem cell | 1.87e-09 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.21e-17 | 76 |
hematopoietic system | 3.33e-15 | 98 |
blood island | 3.33e-15 | 98 |
bone element | 8.26e-15 | 82 |
immune system | 5.00e-14 | 93 |
connective tissue | 2.85e-13 | 371 |
hemolymphoid system | 3.56e-13 | 108 |
skeletal element | 2.25e-12 | 90 |
larynx | 4.17e-11 | 9 |
skeletal system | 1.60e-10 | 100 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.10e-24 | 39 |
hematologic cancer | 1.16e-23 | 51 |
immune system cancer | 1.16e-23 | 51 |
myeloid leukemia | 1.14e-18 | 31 |
chronic leukemia | 6.36e-08 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.