FFCP PHASE1:Hg19::chr11:63258601..63258671,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=117245|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24978|TSSclassifier=S|UniProt=Q96KN8,F5GZ87,F5H4Y9|association_with_transcript=0bp_to_ENST00000301790,ENST00000539221,ENST00000540857_5end|coexpression_cluster_id=C1|description=CAGE_peak_2_at_HRASLS5_5end|id=chr11:63258601..63258671,-|ontology_enrichment_celltype=CL:0002322!2.52e-07!5|ontology_enrichment_celltype_v019=CL:0002322;4.61e-15;5!CL:0000136;1.44e-08;13|ontology_enrichment_celltype_v019_2=CL:0002322,3.62e-15,5;CL:0000136,3.27e-07,15|ontology_enrichment_development_v019=UBERON:0006601;2.55e-10;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.56e-47!115;UBERON:0001049!3.31e-43!57;UBERON:0005068!3.31e-43!57;UBERON:0006241!3.31e-43!57;UBERON:0007135!3.31e-43!57;UBERON:0001017!9.30e-41!82;UBERON:0005743!2.02e-39!86;UBERON:0002616!2.33e-36!59;UBERON:0003075!8.25e-36!86;UBERON:0007284!8.25e-36!86;UBERON:0002346!1.58e-34!90;UBERON:0003080!5.50e-34!42;UBERON:0000073!9.33e-34!94;UBERON:0001016!9.33e-34!94;UBERON:0002780!4.71e-33!41;UBERON:0001890!4.71e-33!41;UBERON:0006240!4.71e-33!41;UBERON:0000955!6.66e-33!69;UBERON:0006238!6.66e-33!69;UBERON:0001893!1.57e-28!34;UBERON:0002020!1.75e-28!34;UBERON:0003528!1.75e-28!34;UBERON:0002791!2.00e-27!33;UBERON:0001869!2.93e-26!32;UBERON:0003056!9.79e-26!61;UBERON:0000956!2.15e-23!25;UBERON:0000203!2.15e-23!25;UBERON:0002619!3.92e-23!22;UBERON:0001950!3.87e-21!20;UBERON:0004121!1.45e-19!169;UBERON:0000924!2.77e-19!173;UBERON:0006601!2.77e-19!173;UBERON:0000033!1.04e-17!123;UBERON:0000153!4.34e-16!129;UBERON:0007811!4.34e-16!129;UBERON:0000025!1.96e-11!194;UBERON:0003076!3.28e-10!15;UBERON:0003057!3.28e-10!15;UBERON:0002298!9.08e-10!8;UBERON:0004111!1.08e-09!241;UBERON:0000200!1.90e-08!6;UBERON:0003135!2.27e-08!11;UBERON:0000064!3.86e-08!219;UBERON:0001872!1.08e-07!5;UBERON:0002021!2.30e-07!5;UBERON:0000477!2.42e-07!286;UBERON:0004733!5.46e-07!12;UBERON:0002028!5.46e-07!12;UBERON:0007277!5.46e-07!12;UBERON:0000119!8.91e-07!312|ontology_enrichment_uberon_v019=UBERON:0002619;1.14e-44;22!UBERON:0001950;2.95e-44;20!UBERON:0000956;6.31e-39;25!UBERON:0000203;6.31e-39;25!UBERON:0001893;7.70e-39;34!UBERON:0003528;3.68e-37;34!UBERON:0002020;3.68e-37;34!UBERON:0001869;3.43e-35;32!UBERON:0002791;3.58e-35;32!UBERON:0002780;3.62e-30;41!UBERON:0001890;3.62e-30;41!UBERON:0000073;9.55e-25;53!UBERON:0002616;9.55e-25;53!UBERON:0001017;2.18e-16;75!UBERON:0001872;5.61e-16;5!UBERON:0000955;1.69e-15;68!UBERON:0002021;1.89e-15;5!UBERON:0001016;2.84e-13;83!UBERON:0000200;1.66e-12;6!UBERON:0007023;2.68e-11;114!UBERON:0001871;3.20e-11;6!UBERON:0002298;1.56e-08;6!UBERON:0000125;1.93e-08;9!UBERON:0002308;1.93e-08;9!UBERON:0002148;2.01e-07;2!UBERON:0006331;2.01e-07;2!UBERON:0009662;2.01e-07;2!UBERON:0002771;5.01e-07;2!UBERON:0001905;5.01e-07;2!UBERON:0002757;5.01e-07;2!UBERON:0010134;5.01e-07;2!UBERON:0005408;5.01e-07;2!UBERON:0001899;5.01e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.23e-48,56;UBERON:0005068,5.23e-48,56;UBERON:0006241,5.23e-48,56;UBERON:0007135,5.23e-48,56;UBERON:0001893,5.11e-45,34;UBERON:0003528,6.30e-45,34;UBERON:0002020,6.30e-45,34;UBERON:0002619,1.07e-44,22;UBERON:0001950,1.78e-44,20;UBERON:0000073,5.81e-44,53;UBERON:0002616,5.81e-44,53;UBERON:0002780,3.00e-43,41;UBERON:0001890,3.00e-43,41;UBERON:0003080,3.00e-43,41;UBERON:0006240,3.00e-43,41;UBERON:0001017,1.72e-42,81;UBERON:0001869,4.50e-40,32;UBERON:0002791,6.22e-40,32;UBERON:0000956,5.98e-39,25;UBERON:0000203,5.98e-39,25;UBERON:0001016,2.20e-37,89;UBERON:0000955,2.44e-37,68;UBERON:0006238,2.44e-37,68;UBERON:0007023,7.70e-33,114;UBERON:0003075,2.74e-30,82;UBERON:0007284,2.74e-30,82;UBERON:0002346,1.66e-28,86;UBERON:0003056,4.84e-27,61;UBERON:0010371,3.48e-22,104;UBERON:0010314,5.18e-20,132;UBERON:0004121,2.13e-16,171;UBERON:0000924,2.13e-16,171;UBERON:0006601,2.13e-16,171;UBERON:0001872,4.96e-16,5;UBERON:0002021,2.92e-15,5;UBERON:0000025,6.36e-13,192;UBERON:0000200,7.03e-13,6;UBERON:0001871,3.42e-11,6;UBERON:0011216,1.78e-10,223;UBERON:0004111,4.09e-10,240;UBERON:0002298,1.77e-08,6;UBERON:0000125,4.62e-08,9;UBERON:0002308,4.62e-08,9;UBERON:0003076,3.42e-07,15;UBERON:0003057,3.42e-07,15;UBERON:0002148,3.58e-07,2;UBERON:0006331,3.58e-07,2;UBERON:0009662,3.58e-07,2;UBERON:0002771,4.32e-07,2;UBERON:0001905,4.32e-07,2;UBERON:0002757,4.32e-07,2;UBERON:0010134,4.32e-07,2;UBERON:0005408,4.32e-07,2;UBERON:0001899,4.32e-07,2|phase1_expression=0,0.642301571672949,0.140954404095971,0,0.893922188854576,0,0,1.26343974685366,2.35067065379855,0,0,0.873765488520689,0,0,0,0,0,0,0,0.61560529038394,0.204000691244253,0.313454721478088,0,0.273748850145768,0.376627918784408,0,0,0,0.786728553697808,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.148286563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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=117245 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24978 | |||
|TSSclassifier=S | |||
|UniProt=Q96KN8,F5GZ87,F5H4Y9 | |||
|association_with_transcript=0bp_to_ENST00000301790,ENST00000539221,ENST00000540857_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_HRASLS5_5end | |||
|id=chr11:63258601..63258671,- | |||
|ontology_enrichment_celltype=CL:0002322!2.52e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.61e-15;5!CL:0000136;1.44e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.62e-15,5;CL:0000136,3.27e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.55e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.56e-47!115;UBERON:0001049!3.31e-43!57;UBERON:0005068!3.31e-43!57;UBERON:0006241!3.31e-43!57;UBERON:0007135!3.31e-43!57;UBERON:0001017!9.30e-41!82;UBERON:0005743!2.02e-39!86;UBERON:0002616!2.33e-36!59;UBERON:0003075!8.25e-36!86;UBERON:0007284!8.25e-36!86;UBERON:0002346!1.58e-34!90;UBERON:0003080!5.50e-34!42;UBERON:0000073!9.33e-34!94;UBERON:0001016!9.33e-34!94;UBERON:0002780!4.71e-33!41;UBERON:0001890!4.71e-33!41;UBERON:0006240!4.71e-33!41;UBERON:0000955!6.66e-33!69;UBERON:0006238!6.66e-33!69;UBERON:0001893!1.57e-28!34;UBERON:0002020!1.75e-28!34;UBERON:0003528!1.75e-28!34;UBERON:0002791!2.00e-27!33;UBERON:0001869!2.93e-26!32;UBERON:0003056!9.79e-26!61;UBERON:0000956!2.15e-23!25;UBERON:0000203!2.15e-23!25;UBERON:0002619!3.92e-23!22;UBERON:0001950!3.87e-21!20;UBERON:0004121!1.45e-19!169;UBERON:0000924!2.77e-19!173;UBERON:0006601!2.77e-19!173;UBERON:0000033!1.04e-17!123;UBERON:0000153!4.34e-16!129;UBERON:0007811!4.34e-16!129;UBERON:0000025!1.96e-11!194;UBERON:0003076!3.28e-10!15;UBERON:0003057!3.28e-10!15;UBERON:0002298!9.08e-10!8;UBERON:0004111!1.08e-09!241;UBERON:0000200!1.90e-08!6;UBERON:0003135!2.27e-08!11;UBERON:0000064!3.86e-08!219;UBERON:0001872!1.08e-07!5;UBERON:0002021!2.30e-07!5;UBERON:0000477!2.42e-07!286;UBERON:0004733!5.46e-07!12;UBERON:0002028!5.46e-07!12;UBERON:0007277!5.46e-07!12;UBERON:0000119!8.91e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.14e-44;22!UBERON:0001950;2.95e-44;20!UBERON:0000956;6.31e-39;25!UBERON:0000203;6.31e-39;25!UBERON:0001893;7.70e-39;34!UBERON:0003528;3.68e-37;34!UBERON:0002020;3.68e-37;34!UBERON:0001869;3.43e-35;32!UBERON:0002791;3.58e-35;32!UBERON:0002780;3.62e-30;41!UBERON:0001890;3.62e-30;41!UBERON:0000073;9.55e-25;53!UBERON:0002616;9.55e-25;53!UBERON:0001017;2.18e-16;75!UBERON:0001872;5.61e-16;5!UBERON:0000955;1.69e-15;68!UBERON:0002021;1.89e-15;5!UBERON:0001016;2.84e-13;83!UBERON:0000200;1.66e-12;6!UBERON:0007023;2.68e-11;114!UBERON:0001871;3.20e-11;6!UBERON:0002298;1.56e-08;6!UBERON:0000125;1.93e-08;9!UBERON:0002308;1.93e-08;9!UBERON:0002148;2.01e-07;2!UBERON:0006331;2.01e-07;2!UBERON:0009662;2.01e-07;2!UBERON:0002771;5.01e-07;2!UBERON:0001905;5.01e-07;2!UBERON:0002757;5.01e-07;2!UBERON:0010134;5.01e-07;2!UBERON:0005408;5.01e-07;2!UBERON:0001899;5.01e-07;2 | |||
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|short_description=p2@HRASLS5 | |||
}} |
Revision as of 18:38, 10 September 2013
Short description: | p2@HRASLS5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_HRASLS5_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000301790, ENST00000539221, ENST00000540857_5end |
EntrezGene: | HRASLS5 |
HGNC: | 24978 |
UniProt: | Q96KN8F5GZ87F5H4Y9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.62e-15 | 5 |
fat cell | 3.27e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.