FFCP PHASE1:Hg19::chr12:30948804..30948817,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-47bp_to_ENST00000547804,uc001rjo.1_5end|description=CAGE_peak_6_at_ENST00000547804_5end,CAGE_peak_6_at_uc001rjo.1_5end|id=chr12:30948804..30948817,+|ontology_enrichment_celltype=CL:0002321!7.67e-10!248;CL:0000220!1.13e-09!246;CL:0000548!6.62e-08!679;CL:0000004!6.62e-08!679;CL:0000255!6.62e-08!679;CL:0000012!1.16e-07!682;CL:0000066!1.23e-07!254;CL:0000055!1.60e-07!180|ontology_enrichment_celltype_v019=CL:0000228;7.49e-10;1!CL:0002372;7.49e-10;1!CL:0000083;2.13e-09;4|ontology_enrichment_celltype_v019_2=CL:0000228,6.88e-10,1;CL:0002372,6.88e-10,1;CL:0000083,2.36e-09,4|ontology_enrichment_development_v019=UBERON:0009117;3.46e-08;10!UBERON:0005564;3.46e-08;10|ontology_enrichment_disease=DOID:305!1.37e-08!106;DOID:0050687!9.09e-07!143|ontology_enrichment_disease_v019=DOID:4929;7.11e-18;2!DOID:3111;3.74e-10;1!DOID:3603;3.74e-10;1!DOID:1793;2.13e-09;4!DOID:299;2.93e-08;25!DOID:3908;8.11e-08;5|ontology_enrichment_disease_v019_2=DOID:4929,9.58e-18,2;DOID:3111,3.74e-10,1;DOID:3603,3.74e-10,1;DOID:1793,2.36e-09,4;DOID:305,2.45e-09,106;DOID:299,2.78e-08,25;DOID:3908,7.98e-08,5;DOID:0050687,1.23e-07,143|ontology_enrichment_uberon=UBERON:0001048!2.55e-11!168;UBERON:0001637!1.13e-08!42;UBERON:0003509!1.13e-08!42;UBERON:0004572!1.13e-08!42;UBERON:0002323!1.29e-08!46;UBERON:0004872!4.64e-08!84;UBERON:0004458!1.21e-07!49;UBERON:0001264!2.74e-07!10;UBERON:0003922!2.74e-07!10;UBERON:0003923!2.74e-07!10;UBERON:0003924!2.74e-07!10;UBERON:0003921!2.74e-07!10;UBERON:0001981!3.35e-07!60;UBERON:0007500!3.35e-07!60;UBERON:0004537!3.35e-07!60;UBERON:0006965!3.35e-07!60;UBERON:0003914!4.81e-07!118;UBERON:0002049!5.46e-07!79;UBERON:0007798!5.46e-07!79|ontology_enrichment_uberon_v019=UBERON:0001264;7.08e-30;10!UBERON:0002075;1.99e-16;18!UBERON:0002323;1.55e-15;45!UBERON:0002553;5.94e-12;52!UBERON:0004458;1.14e-11;48!UBERON:0000991;8.18e-10;21!UBERON:0004913;1.61e-09;1!UBERON:0003703;1.61e-09;1!UBERON:0001174;1.61e-09;1!UBERON:0004914;1.61e-09;1!UBERON:0002394;2.36e-09;4!UBERON:0003928;2.36e-09;4!UBERON:0002119;4.05e-09;4!UBERON:0000058;3.26e-08;10|ontology_enrichment_uberon_v019_2=UBERON:0001264,6.92e-30,10;UBERON:0002323,3.02e-20,46;UBERON:0004458,6.74e-19,49;UBERON:0003886,5.55e-17,54;UBERON:0002075,1.97e-16,18;UBERON:0002553,7.92e-15,61;UBERON:0000991,7.59e-10,21;UBERON:0009196,7.59e-10,21;UBERON:0009117,7.59e-10,21;UBERON:0005564,7.59e-10,21;UBERON:0004913,2.08e-09,1;UBERON:0003703,2.08e-09,1;UBERON:0001174,2.08e-09,1;UBERON:0004914,2.08e-09,1;UBERON:0004176,2.17e-09,22;UBERON:0002119,3.89e-09,4|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.410623275218653,0.376627918784408,0,0,0,0,0,0,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.443458794925128,0.43917392846563,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0.347140501607594,1.13061588384802,0.838998872419812,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0.357198913136319,0,0,0,0,0,0,0,0,0,0.633152558322899,0.264818361626438,0,0.709336764396714,0,0,0.49333509683432,0.311211035399766,0.538842688278752,0.326923806226917,0,0,0,0,0.570471821544449,0,0,0.161872944368132,0,0.204154171254893,0,0.103325781175765,0,0,0.910161361938026,0,0,0.125118519871964,0.554128230968366,0,0,0.300476117813194,0.340296549480063,0.358779271377724,0,0,0,0.206105058476878,0,0,0.675105328965065,0.292311015483596,0,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0.243947412259191,0,0.348581828608555,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.34779121492523,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.626909658919938,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.448524337381443,0,0.66004457238855,0.258543431515556,0,0,0.26593811658487,0,0.257207374262142,0,0.532844358032199,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0.718874566474748,0,2.85273810081437,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0.76228387266739,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0.368323955743585,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0.165284915360978,0.384380134730212,0.255225424989168,0.30347334256665,0,0.62962469366128,0,0,0.532306030317022,0,0.37064843820784,0.572499546967965,0,0,0,0,0,0,0.78494864019923,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-47bp_to_ENST00000547804,uc001rjo.1_5end | |||
|description=CAGE_peak_6_at_ENST00000547804_5end,CAGE_peak_6_at_uc001rjo.1_5end | |||
|id=chr12:30948804..30948817,+ | |||
|ontology_enrichment_celltype=CL:0002321!7.67e-10!248;CL:0000220!1.13e-09!246;CL:0000548!6.62e-08!679;CL:0000004!6.62e-08!679;CL:0000255!6.62e-08!679;CL:0000012!1.16e-07!682;CL:0000066!1.23e-07!254;CL:0000055!1.60e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000228;7.49e-10;1!CL:0002372;7.49e-10;1!CL:0000083;2.13e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,6.88e-10,1;CL:0002372,6.88e-10,1;CL:0000083,2.36e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.46e-08;10!UBERON:0005564;3.46e-08;10 | |||
|ontology_enrichment_disease=DOID:305!1.37e-08!106;DOID:0050687!9.09e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:4929;7.11e-18;2!DOID:3111;3.74e-10;1!DOID:3603;3.74e-10;1!DOID:1793;2.13e-09;4!DOID:299;2.93e-08;25!DOID:3908;8.11e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,9.58e-18,2;DOID:3111,3.74e-10,1;DOID:3603,3.74e-10,1;DOID:1793,2.36e-09,4;DOID:305,2.45e-09,106;DOID:299,2.78e-08,25;DOID:3908,7.98e-08,5;DOID:0050687,1.23e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001048!2.55e-11!168;UBERON:0001637!1.13e-08!42;UBERON:0003509!1.13e-08!42;UBERON:0004572!1.13e-08!42;UBERON:0002323!1.29e-08!46;UBERON:0004872!4.64e-08!84;UBERON:0004458!1.21e-07!49;UBERON:0001264!2.74e-07!10;UBERON:0003922!2.74e-07!10;UBERON:0003923!2.74e-07!10;UBERON:0003924!2.74e-07!10;UBERON:0003921!2.74e-07!10;UBERON:0001981!3.35e-07!60;UBERON:0007500!3.35e-07!60;UBERON:0004537!3.35e-07!60;UBERON:0006965!3.35e-07!60;UBERON:0003914!4.81e-07!118;UBERON:0002049!5.46e-07!79;UBERON:0007798!5.46e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0001264;7.08e-30;10!UBERON:0002075;1.99e-16;18!UBERON:0002323;1.55e-15;45!UBERON:0002553;5.94e-12;52!UBERON:0004458;1.14e-11;48!UBERON:0000991;8.18e-10;21!UBERON:0004913;1.61e-09;1!UBERON:0003703;1.61e-09;1!UBERON:0001174;1.61e-09;1!UBERON:0004914;1.61e-09;1!UBERON:0002394;2.36e-09;4!UBERON:0003928;2.36e-09;4!UBERON:0002119;4.05e-09;4!UBERON:0000058;3.26e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,6.92e-30,10;UBERON:0002323,3.02e-20,46;UBERON:0004458,6.74e-19,49;UBERON:0003886,5.55e-17,54;UBERON:0002075,1.97e-16,18;UBERON:0002553,7.92e-15,61;UBERON:0000991,7.59e-10,21;UBERON:0009196,7.59e-10,21;UBERON:0009117,7.59e-10,21;UBERON:0005564,7.59e-10,21;UBERON:0004913,2.08e-09,1;UBERON:0003703,2.08e-09,1;UBERON:0001174,2.08e-09,1;UBERON:0004914,2.08e-09,1;UBERON:0004176,2.17e-09,22;UBERON:0002119,3.89e-09,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.410623275218653,0.376627918784408,0,0,0,0,0,0,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.443458794925128,0.43917392846563,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0.347140501607594,1.13061588384802,0.838998872419812,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0.357198913136319,0,0,0,0,0,0,0,0,0,0.633152558322899,0.264818361626438,0,0.709336764396714,0,0,0.49333509683432,0.311211035399766,0.538842688278752,0.326923806226917,0,0,0,0,0.570471821544449,0,0,0.161872944368132,0,0.204154171254893,0,0.103325781175765,0,0,0.910161361938026,0,0,0.125118519871964,0.554128230968366,0,0,0.300476117813194,0.340296549480063,0.358779271377724,0,0,0,0.206105058476878,0,0,0.675105328965065,0.292311015483596,0,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0.243947412259191,0,0.348581828608555,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.34779121492523,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.626909658919938,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.448524337381443,0,0.66004457238855,0.258543431515556,0,0,0.26593811658487,0,0.257207374262142,0,0.532844358032199,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0.718874566474748,0,2.85273810081437,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0.76228387266739,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0.368323955743585,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0.165284915360978,0.384380134730212,0.255225424989168,0.30347334256665,0,0.62962469366128,0,0,0.532306030317022,0,0.37064843820784,0.572499546967965,0,0,0,0,0,0,0.78494864019923,0,0,0,0.606547444719948,3.17020642346017,0.842516912477962,0,0.487426979262569,1.05650146756755,0,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0.281695602532241,0.286822704408103,0.196498082026242,0.7133421029625,0,0,0,0.379473173765715,0,0.384888450902048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96685908293468,0,0,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0.511343412510774,0,0.311039587661807,3.86433909933505,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0.331737779793674,0.295547618953547,0,0.10893846351899,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,1.21390189767046,0,0,0,0,0,0,3.32326936353593,1.98595173525299,2.5114633472578,2.38944859545918,0,0,0,0.0979923974143777,0.0870592065804026,0,0.51595809741485,0.483781656445426,0.365446585430928,0.410577285266046,0,0,0,0.822251547880505,0.993573058514948,0,0,0.320635281006135,0.213452994739353,0,1.72908500584927,0,0,0.288109595976299,0.99402028452346,0,0.407712618220842,0.313808538937,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0.0824158583811665,0,0,0,0,0,0.321506296930038,0.962776056180637,0,0,0,0.0607495566580247,0,0,0,2.74560874950457,0,0.575745591958336,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0.915360273587694,0.151230923763239,0.15543720058278,0.443565449968902,0,1.34940933649081,0.155262956876259,1.24411862352257,0,0,0.300515217994437,0.380805212168795,0.406870733204662,0.363697318405119,0.537052785212442,0.464033759878494,0,0,0,0,0,0.192619830407303,0,0,0.680117776536817,0,0.97894681802587,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,6.55067582411744,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0.107824811396682,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.392590874004102,0,0,0,0,0,0,0,0,0,0,0,1.18284868973636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0.135939465953663,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473328002922261,0.426067023795788,0,0,0,0.955538938977433,0,0.098150233615243,1.70685094975177,0,0,0,0,0,0.795803100645473,0,0,0,0,0,0,0,0,0.471353094203252,0.196308467114945,0,0,0.169927114687817,0,0.128915775947154,0,0.178553938605658,1.05868461514708,0.561689566824178,0,0,0,0,0,0,0,0,0,0.432626562123789,0.756998549010474,0.109265571963696,0,1.32585478664576,2.93939145792117,0.18378979906969,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0.071722205392676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| |||
|short_description=p6@ENST00000547804,p6@uc001rjo.1 | |||
}} |
Revision as of 22:25, 10 September 2013
Short description: | p6@ENST00000547804, p6@uc001rjo.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ENST00000547804_5end, CAGE_peak_6_at_uc001rjo.1_5end |
Coexpression cluster: | NA |
Association with transcript: | -47bp_to_ENST00000547804, uc001rjo.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 6.88e-10 | 1 |
myotube | 6.88e-10 | 1 |
epithelial cell of pancreas | 2.36e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
pancreas | 6.92e-30 | 10 |
body cavity | 3.02e-20 | 46 |
body cavity or lining | 6.74e-19 | 49 |
body cavity precursor | 5.55e-17 | 54 |
viscus | 1.97e-16 | 18 |
anatomical cavity | 7.92e-15 | 61 |
gonad | 7.59e-10 | 21 |
indifferent external genitalia | 7.59e-10 | 21 |
indifferent gonad | 7.59e-10 | 21 |
gonad primordium | 7.59e-10 | 21 |
hepatopancreatic ampulla | 2.08e-09 | 1 |
extrahepatic bile duct | 2.08e-09 | 1 |
common bile duct | 2.08e-09 | 1 |
duodenal papilla | 2.08e-09 | 1 |
external genitalia | 2.17e-09 | 22 |
left ovary | 3.89e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 9.58e-18 | 2 |
cystadenocarcinoma | 3.74e-10 | 1 |
mucinous cystadenocarcinoma | 3.74e-10 | 1 |
pancreatic cancer | 2.36e-09 | 4 |
carcinoma | 2.45e-09 | 106 |
adenocarcinoma | 2.78e-08 | 25 |
non-small cell lung carcinoma | 7.98e-08 | 5 |
cell type cancer | 1.23e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.