FFCP PHASE1:Hg19::chr12:65146669..65146704,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2799|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4422|TSSclassifier=S|UniProt=|association_with_transcript=-18bp_to_ENST00000418919,uc001ssf.2_5end|coexpression_cluster_id=C17|description=CAGE_peak_3_at_GNS_5end|id=chr12:65146669..65146704,-|ontology_enrichment_celltype=CL:0002139!3.43e-23!24;CL:0000071!8.59e-18!18;CL:0002546!8.59e-18!18;CL:0000115!1.56e-14!35;CL:0002274!2.29e-14!5;CL:0000457!2.29e-14!5;CL:0002191!2.29e-14!5;CL:0000097!2.29e-14!5;CL:0000831!2.29e-14!5;CL:0002028!2.29e-14!5;CL:0002078!1.03e-10!44;CL:1000413!3.18e-10!9;CL:0000213!1.51e-09!57;CL:0000215!1.51e-09!57;CL:0002144!1.78e-08!3;CL:0000163!9.93e-08!9;CL:0000763!1.44e-07!112;CL:0000049!1.44e-07!112;CL:0005020!6.03e-07!6;CL:0002138!6.03e-07!6;CL:0005022!6.03e-07!6;CL:0000839!6.68e-07!70|ontology_enrichment_celltype_v019=CL:0000097;5.49e-67;5!CL:0000163;2.54e-37;9!CL:0000151;1.13e-08;36!CL:0002545;7.78e-08;2!CL:0000763;3.26e-07;100!CL:0000071;3.58e-07;18|ontology_enrichment_celltype_v019_2=CL:0000097,5.49e-67,5;CL:0002028,5.49e-67,5;CL:0000163,2.54e-37,9;CL:0000763,1.56e-13,108;CL:0000049,1.56e-13,108;CL:0000151,2.40e-09,36;CL:0002032,1.13e-08,161;CL:0000837,1.13e-08,161;CL:0000037,2.95e-08,168;CL:0002545,8.60e-08,2;CL:0000988,9.07e-08,177;CL:0000071,3.69e-07,18;CL:0002546,3.69e-07,18|ontology_enrichment_development_v019=CL:0002546;3.58e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1036;1.18e-15;8!DOID:8692;1.28e-14;31!DOID:8552;2.25e-14;1!DOID:1240;1.34e-09;39|ontology_enrichment_disease_v019_2=DOID:1036,1.16e-15,8;DOID:8692,4.75e-15,31;DOID:8552,1.84e-14,1;DOID:1240,6.59e-12,39;DOID:2531,4.94e-09,51;DOID:0060083,4.94e-09,51|ontology_enrichment_uberon=UBERON:0001986!8.59e-18!18;UBERON:0004638!8.59e-18!18;UBERON:0004852!8.59e-18!18;UBERON:0000487!5.17e-14!22;UBERON:0006914!5.58e-12!25;UBERON:0003915!3.18e-10!9;UBERON:0004700!3.18e-10!9;UBERON:0001917!3.18e-10!9;UBERON:0000055!2.79e-09!69;UBERON:0001915!1.78e-08!3;UBERON:0001982!1.78e-08!3;UBERON:0002049!1.71e-07!79;UBERON:0007798!1.71e-07!79;UBERON:0003081!3.64e-07!216;UBERON:0001981!9.57e-07!60;UBERON:0007500!9.57e-07!60;UBERON:0004537!9.57e-07!60;UBERON:0006965!9.57e-07!60|ontology_enrichment_uberon_v019=UBERON:0005800;7.78e-08;2!UBERON:0001515;7.78e-08;2!UBERON:0004638;3.58e-07;18!UBERON:0001986;3.58e-07;18!UBERON:0004852;3.58e-07;18|ontology_enrichment_uberon_v019_2=UBERON:0005800,8.60e-08,2;UBERON:0001515,8.60e-08,2;UBERON:0004638,3.69e-07,18;UBERON:0001986,3.69e-07,18;UBERON:0004852,3.69e-07,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.668462741311041,0.294605907474837,0,0,0.25618263945135,0.520237390239513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0.196468613246569,0,0,0.324547393654683,0,0,0,0,0,0.596287222100115,0,0,0,0.419499436209906,1.6507082516404,0.626984899610432,0.258416759169329,0.71153252537342,0,0.402829317109147,8.36299316290364,0.24406205754817,1.10298924103761,0.81014194788176,0.0892997282840798,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.67355336034844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,0,0.190254152234598,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,322.694420821843,93.859630658099,6.01251535068239,9.80015683235338,2.77733353538036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90506224451495,0,0,0,0,0,0,0,0,0,1.03051603426729,0,0,0,0,0.835218521685727,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,1.53403023753232,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,4.55242743545572,1.82832850090172,0,0,0,0,8.74151184392083,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,5.50019889020571,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606596470166591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0|short_description=p3@GNS}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2799 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4422 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-18bp_to_ENST00000418919,uc001ssf.2_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_3_at_GNS_5end | |||
|id=chr12:65146669..65146704,- | |||
|ontology_enrichment_celltype=CL:0002139!3.43e-23!24;CL:0000071!8.59e-18!18;CL:0002546!8.59e-18!18;CL:0000115!1.56e-14!35;CL:0002274!2.29e-14!5;CL:0000457!2.29e-14!5;CL:0002191!2.29e-14!5;CL:0000097!2.29e-14!5;CL:0000831!2.29e-14!5;CL:0002028!2.29e-14!5;CL:0002078!1.03e-10!44;CL:1000413!3.18e-10!9;CL:0000213!1.51e-09!57;CL:0000215!1.51e-09!57;CL:0002144!1.78e-08!3;CL:0000163!9.93e-08!9;CL:0000763!1.44e-07!112;CL:0000049!1.44e-07!112;CL:0005020!6.03e-07!6;CL:0002138!6.03e-07!6;CL:0005022!6.03e-07!6;CL:0000839!6.68e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000097;5.49e-67;5!CL:0000163;2.54e-37;9!CL:0000151;1.13e-08;36!CL:0002545;7.78e-08;2!CL:0000763;3.26e-07;100!CL:0000071;3.58e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.49e-67,5;CL:0002028,5.49e-67,5;CL:0000163,2.54e-37,9;CL:0000763,1.56e-13,108;CL:0000049,1.56e-13,108;CL:0000151,2.40e-09,36;CL:0002032,1.13e-08,161;CL:0000837,1.13e-08,161;CL:0000037,2.95e-08,168;CL:0002545,8.60e-08,2;CL:0000988,9.07e-08,177;CL:0000071,3.69e-07,18;CL:0002546,3.69e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;3.58e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;1.18e-15;8!DOID:8692;1.28e-14;31!DOID:8552;2.25e-14;1!DOID:1240;1.34e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.16e-15,8;DOID:8692,4.75e-15,31;DOID:8552,1.84e-14,1;DOID:1240,6.59e-12,39;DOID:2531,4.94e-09,51;DOID:0060083,4.94e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0001986!8.59e-18!18;UBERON:0004638!8.59e-18!18;UBERON:0004852!8.59e-18!18;UBERON:0000487!5.17e-14!22;UBERON:0006914!5.58e-12!25;UBERON:0003915!3.18e-10!9;UBERON:0004700!3.18e-10!9;UBERON:0001917!3.18e-10!9;UBERON:0000055!2.79e-09!69;UBERON:0001915!1.78e-08!3;UBERON:0001982!1.78e-08!3;UBERON:0002049!1.71e-07!79;UBERON:0007798!1.71e-07!79;UBERON:0003081!3.64e-07!216;UBERON:0001981!9.57e-07!60;UBERON:0007500!9.57e-07!60;UBERON:0004537!9.57e-07!60;UBERON:0006965!9.57e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0005800;7.78e-08;2!UBERON:0001515;7.78e-08;2!UBERON:0004638;3.58e-07;18!UBERON:0001986;3.58e-07;18!UBERON:0004852;3.58e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005800,8.60e-08,2;UBERON:0001515,8.60e-08,2;UBERON:0004638,3.69e-07,18;UBERON:0001986,3.69e-07,18;UBERON:0004852,3.69e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.668462741311041,0.294605907474837,0,0,0.25618263945135,0.520237390239513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0.196468613246569,0,0,0.324547393654683,0,0,0,0,0,0.596287222100115,0,0,0,0.419499436209906,1.6507082516404,0.626984899610432,0.258416759169329,0.71153252537342,0,0.402829317109147,8.36299316290364,0.24406205754817,1.10298924103761,0.81014194788176,0.0892997282840798,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.67355336034844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,0,0.190254152234598,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,322.694420821843,93.859630658099,6.01251535068239,9.80015683235338,2.77733353538036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90506224451495,0,0,0,0,0,0,0,0,0,1.03051603426729,0,0,0,0,0.835218521685727,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,1.53403023753232,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,4.55242743545572,1.82832850090172,0,0,0,0,8.74151184392083,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,5.50019889020571,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606596470166591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p3@GNS | |||
}} |
Revision as of 23:56, 10 September 2013
Short description: | p3@GNS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_GNS_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -18bp_to_ENST00000418919, uc001ssf.2_5end |
EntrezGene: | GNS |
HGNC: | 4422 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.49e-67 | 5 |
basophil mast progenitor cell | 5.49e-67 | 5 |
endocrine cell | 2.54e-37 | 9 |
myeloid cell | 1.56e-13 | 108 |
common myeloid progenitor | 1.56e-13 | 108 |
secretory cell | 2.40e-09 | 36 |
hematopoietic oligopotent progenitor cell | 1.13e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.13e-08 | 161 |
hematopoietic stem cell | 2.95e-08 | 168 |
thoracic aorta endothelial cell | 8.60e-08 | 2 |
hematopoietic cell | 9.07e-08 | 177 |
blood vessel endothelial cell | 3.69e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.69e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
segment of aorta | 8.60e-08 | 2 |
thoracic aorta | 8.60e-08 | 2 |
blood vessel endothelium | 3.69e-07 | 18 |
endothelium | 3.69e-07 | 18 |
cardiovascular system endothelium | 3.69e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.16e-15 | 8 |
myeloid leukemia | 4.75e-15 | 31 |
chronic myeloid leukemia | 1.84e-14 | 1 |
leukemia | 6.59e-12 | 39 |
hematologic cancer | 4.94e-09 | 51 |
immune system cancer | 4.94e-09 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.