FFCP PHASE1:Hg19::chr13:38164537..38164581,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C349|description=CAGE_peak_at_chr13:38164537..38164581,-|id=chr13:38164537..38164581,-|ontology_enrichment_celltype=CL:0000055!3.26e-25!180;CL:0000680!1.85e-15!57;CL:0000056!1.85e-15!57;CL:0000355!1.85e-15!57;CL:0000057!2.09e-14!75;CL:0000187!6.25e-14!54;CL:0000183!9.52e-12!59;CL:0002334!1.61e-11!12;CL:0000393!2.32e-11!60;CL:0000211!2.32e-11!60;CL:0002494!5.16e-11!16;CL:0000222!4.35e-09!119;CL:0000048!7.11e-09!430;CL:0000723!1.37e-08!436;CL:0000192!2.22e-08!42;CL:0000514!2.22e-08!42;CL:0000034!8.05e-08!444;CL:0002548!9.96e-07!6|ontology_enrichment_celltype_v019=CL:0002334;5.59e-14;12!CL:0002494;3.10e-09;16!CL:1000306;7.33e-08;4!CL:0002547;7.33e-08;4!CL:0002548;1.15e-07;6!CL:0002580;5.24e-07;3|ontology_enrichment_celltype_v019_2=CL:0000057,1.61e-14,76;CL:0002334,4.57e-14,12;CL:0000048,7.80e-11,427;CL:0000723,2.19e-10,433;CL:0000034,8.25e-10,441;CL:0002494,2.95e-09,16;CL:0000680,3.10e-08,58;CL:0000056,3.10e-08,58;CL:0000355,3.10e-08,58;CL:0000187,5.69e-08,55;CL:1000306,5.88e-08,4;CL:0002547,5.88e-08,4;CL:0002548,8.43e-08,6;CL:0002580,5.01e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!6.36e-08!14|ontology_enrichment_disease_v019=DOID:2394;1.59e-11;14|ontology_enrichment_disease_v019_2=DOID:2394,1.96e-11,14|ontology_enrichment_uberon=UBERON:0001134!8.69e-16!61;UBERON:0002036!8.69e-16!61;UBERON:0003082!8.69e-16!61;UBERON:0002385!7.57e-15!63;UBERON:0001015!7.57e-15!63;UBERON:0000383!7.57e-15!63;UBERON:0004872!2.84e-14!84;UBERON:0004290!4.97e-12!70;UBERON:0000914!1.73e-11!83;UBERON:0002329!1.73e-11!83;UBERON:0003077!1.73e-11!83;UBERON:0003059!1.73e-11!83;UBERON:0007282!1.73e-11!83;UBERON:0009618!1.73e-11!83;UBERON:0007285!1.73e-11!83;UBERON:0001637!1.94e-11!42;UBERON:0003509!1.94e-11!42;UBERON:0004572!1.94e-11!42;UBERON:0000948!4.52e-11!24;UBERON:0005498!4.52e-11!24;UBERON:0004140!4.52e-11!24;UBERON:0009881!4.52e-11!24;UBERON:0004141!4.52e-11!24;UBERON:0003084!4.52e-11!24;UBERON:0007005!4.52e-11!24;UBERON:0004139!4.52e-11!24;UBERON:0004291!4.52e-11!24;UBERON:0004535!1.51e-09!110;UBERON:0007100!3.84e-09!27;UBERON:0001009!6.58e-09!113;UBERON:0004573!8.26e-09!33;UBERON:0004571!8.26e-09!33;UBERON:0000486!1.76e-08!82;UBERON:0000490!2.97e-08!138;UBERON:0003914!8.50e-08!118;UBERON:0001981!3.17e-07!60;UBERON:0007500!3.17e-07!60;UBERON:0004537!3.17e-07!60;UBERON:0006965!3.17e-07!60|ontology_enrichment_uberon_v019=UBERON:0004797;7.33e-08;4!UBERON:0000415;7.33e-08;4!UBERON:0007240;7.33e-08;4!UBERON:0005742;7.33e-08;4!UBERON:0005734;7.33e-08;4!UBERON:0004664;7.33e-08;4!UBERON:0004663;7.33e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.24e-08,62;UBERON:0002036,2.24e-08,62;UBERON:0003082,2.24e-08,62;UBERON:0000415,5.88e-08,4;UBERON:0007240,5.88e-08,4;UBERON:0005742,5.88e-08,4;UBERON:0005734,5.88e-08,4;UBERON:0004664,5.88e-08,4;UBERON:0004663,5.88e-08,4;UBERON:0002385,6.12e-08,64;UBERON:0001015,6.12e-08,64;UBERON:0000383,6.12e-08,64;UBERON:0004872,6.44e-08,83;UBERON:0001637,1.16e-07,42;UBERON:0003509,1.16e-07,42;UBERON:0004572,1.16e-07,42;UBERON:0007524,3.87e-07,73;UBERON:0004573,3.87e-07,33;UBERON:0004571,3.87e-07,33;UBERON:0000948,8.64e-07,24;UBERON:0005498,8.64e-07,24;UBERON:0004140,8.64e-07,24;UBERON:0009881,8.64e-07,24;UBERON:0004141,8.64e-07,24;UBERON:0003084,8.64e-07,24;UBERON:0007005,8.64e-07,24;UBERON:0004139,8.64e-07,24;UBERON:0004291,8.64e-07,24|phase1_expression=1.45342703416445,1.71280419112787,0.845726424575827,2.00146596706261,2.23480547213644,2.61701557230111,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,2.01697543935533,1.20538905604795,0.730310090387373,1.95173119516203,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.68280343881454,1.2786256184353,1.0843174571537,1.50401373190767,0.289693037921647,6.36228757640879,4.37971383272372,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,1.25849830862972,0.275118041940067,0.626984899610432,0,0,0.33472061276467,0,0,0,0,3.24056779152704,0,0,0,0,0,0,0,0,0,25.3455695364612,1.8994576749687,4.36950296683622,10.6129549677061,4.25602058638028,1.68203280042692,5.33744978648525,2.96001058100592,0.933633106199299,5.92726957106628,8.50001896189985,0.151357427644931,2.88087962239999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,2.45190236639216,0.300476117813194,7.48652408856139,2.15267562826634,0.640672166455702,1.90738711043606,0.900273288253207,0.309157587715317,0.772921620136887,0.930584281657949,0.337552664482532,0.389748020644795,2.27190396819703,1.56484827691909,0,3.19508633264953,0.705264687593482,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C349 | |||
|description=CAGE_peak_at_chr13:38164537..38164581,- | |||
|id=chr13:38164537..38164581,- | |||
|ontology_enrichment_celltype=CL:0000055!3.26e-25!180;CL:0000680!1.85e-15!57;CL:0000056!1.85e-15!57;CL:0000355!1.85e-15!57;CL:0000057!2.09e-14!75;CL:0000187!6.25e-14!54;CL:0000183!9.52e-12!59;CL:0002334!1.61e-11!12;CL:0000393!2.32e-11!60;CL:0000211!2.32e-11!60;CL:0002494!5.16e-11!16;CL:0000222!4.35e-09!119;CL:0000048!7.11e-09!430;CL:0000723!1.37e-08!436;CL:0000192!2.22e-08!42;CL:0000514!2.22e-08!42;CL:0000034!8.05e-08!444;CL:0002548!9.96e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002334;5.59e-14;12!CL:0002494;3.10e-09;16!CL:1000306;7.33e-08;4!CL:0002547;7.33e-08;4!CL:0002548;1.15e-07;6!CL:0002580;5.24e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.61e-14,76;CL:0002334,4.57e-14,12;CL:0000048,7.80e-11,427;CL:0000723,2.19e-10,433;CL:0000034,8.25e-10,441;CL:0002494,2.95e-09,16;CL:0000680,3.10e-08,58;CL:0000056,3.10e-08,58;CL:0000355,3.10e-08,58;CL:0000187,5.69e-08,55;CL:1000306,5.88e-08,4;CL:0002547,5.88e-08,4;CL:0002548,8.43e-08,6;CL:0002580,5.01e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.36e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.59e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.96e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!8.69e-16!61;UBERON:0002036!8.69e-16!61;UBERON:0003082!8.69e-16!61;UBERON:0002385!7.57e-15!63;UBERON:0001015!7.57e-15!63;UBERON:0000383!7.57e-15!63;UBERON:0004872!2.84e-14!84;UBERON:0004290!4.97e-12!70;UBERON:0000914!1.73e-11!83;UBERON:0002329!1.73e-11!83;UBERON:0003077!1.73e-11!83;UBERON:0003059!1.73e-11!83;UBERON:0007282!1.73e-11!83;UBERON:0009618!1.73e-11!83;UBERON:0007285!1.73e-11!83;UBERON:0001637!1.94e-11!42;UBERON:0003509!1.94e-11!42;UBERON:0004572!1.94e-11!42;UBERON:0000948!4.52e-11!24;UBERON:0005498!4.52e-11!24;UBERON:0004140!4.52e-11!24;UBERON:0009881!4.52e-11!24;UBERON:0004141!4.52e-11!24;UBERON:0003084!4.52e-11!24;UBERON:0007005!4.52e-11!24;UBERON:0004139!4.52e-11!24;UBERON:0004291!4.52e-11!24;UBERON:0004535!1.51e-09!110;UBERON:0007100!3.84e-09!27;UBERON:0001009!6.58e-09!113;UBERON:0004573!8.26e-09!33;UBERON:0004571!8.26e-09!33;UBERON:0000486!1.76e-08!82;UBERON:0000490!2.97e-08!138;UBERON:0003914!8.50e-08!118;UBERON:0001981!3.17e-07!60;UBERON:0007500!3.17e-07!60;UBERON:0004537!3.17e-07!60;UBERON:0006965!3.17e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;7.33e-08;4!UBERON:0000415;7.33e-08;4!UBERON:0007240;7.33e-08;4!UBERON:0005742;7.33e-08;4!UBERON:0005734;7.33e-08;4!UBERON:0004664;7.33e-08;4!UBERON:0004663;7.33e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.24e-08,62;UBERON:0002036,2.24e-08,62;UBERON:0003082,2.24e-08,62;UBERON:0000415,5.88e-08,4;UBERON:0007240,5.88e-08,4;UBERON:0005742,5.88e-08,4;UBERON:0005734,5.88e-08,4;UBERON:0004664,5.88e-08,4;UBERON:0004663,5.88e-08,4;UBERON:0002385,6.12e-08,64;UBERON:0001015,6.12e-08,64;UBERON:0000383,6.12e-08,64;UBERON:0004872,6.44e-08,83;UBERON:0001637,1.16e-07,42;UBERON:0003509,1.16e-07,42;UBERON:0004572,1.16e-07,42;UBERON:0007524,3.87e-07,73;UBERON:0004573,3.87e-07,33;UBERON:0004571,3.87e-07,33;UBERON:0000948,8.64e-07,24;UBERON:0005498,8.64e-07,24;UBERON:0004140,8.64e-07,24;UBERON:0009881,8.64e-07,24;UBERON:0004141,8.64e-07,24;UBERON:0003084,8.64e-07,24;UBERON:0007005,8.64e-07,24;UBERON:0004139,8.64e-07,24;UBERON:0004291,8.64e-07,24 | |||
|phase1_expression=1.45342703416445,1.71280419112787,0.845726424575827,2.00146596706261,2.23480547213644,2.61701557230111,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,2.01697543935533,1.20538905604795,0.730310090387373,1.95173119516203,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.68280343881454,1.2786256184353,1.0843174571537,1.50401373190767,0.289693037921647,6.36228757640879,4.37971383272372,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,1.25849830862972,0.275118041940067,0.626984899610432,0,0,0.33472061276467,0,0,0,0,3.24056779152704,0,0,0,0,0,0,0,0,0,25.3455695364612,1.8994576749687,4.36950296683622,10.6129549677061,4.25602058638028,1.68203280042692,5.33744978648525,2.96001058100592,0.933633106199299,5.92726957106628,8.50001896189985,0.151357427644931,2.88087962239999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,2.45190236639216,0.300476117813194,7.48652408856139,2.15267562826634,0.640672166455702,1.90738711043606,0.900273288253207,0.309157587715317,0.772921620136887,0.930584281657949,0.337552664482532,0.389748020644795,2.27190396819703,1.56484827691909,0,3.19508633264953,0.705264687593482,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0,0,0,0,0,0.352226082707465,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68053230485111,0,1.690605505112,0.531876233169741,1.04007436911366,0,0,0,0.57191197463259,0,0,0.977208552881205,0,0,12.9618932135622,8.71533458600294,28.2923565045221,0,0,0,3.35474797688216,3.44585807502342,0,2.89562613335158,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,8.31883446123229,14.2743191037729,2.20783381047509,0.468565659970853,0.902838299183157,4.5481500811197,0,1.32845119707087,0.737476674166813,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,9.6762045049323,5.98501695823444,15.9976253826852,5.25370511948374,0.511707249066704,14.3159989817811,1.48418066444991,2.15893571323718,3.9063579568888,0.492762936082855,3.63478100428535,1.62694529843943,0,0.200506470303285,0,1.14814448164607,1.63882051206045,0.524497659837696,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.773365746336976,0.308097234229289,1.07452572308291,1.24052915236078,0.644521469209642,1.59518363305651,1.10794615640931,3.47224939022276,0.495854746082934,0.384380134730212,0,0,0.929691098594572,2.83331112147576,0,0.616067160352178,0,0,1.48259375283136,3.43499728180779,0,0.632758849437452,0.953150969619124,0,0.42793898803392,0,0.78494864019923,0.899362287916574,5.76527762445715,1.88499843753098,0,3.17020642346017,0.421258456238981,0,3.41198885483798,0,0.9554993798559,18.5241115859364,0,0,0.66343897524122,2.19225442626881,0,0,0.811641507850816,0.6196469961995,0,0,0,1.07001315444375,0.354761064070598,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,5.90975216557434,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,0.802577647298789,0,0,0,0,0,2.41981432097328,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.627617077873999,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.134366944973453,2.16179930125442,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,1.8697064787778,7.76728206103659,0.378806010550178,1.50940741051545,0,1.14420034198462,0.151230923763239,0.466311601748341,0.591420599958536,0,0.899606224327209,1.39736661188633,3.31764966272684,12.7604022987838,7.82617592717601,3.60618261593324,29.702806549166,3.25496586563729,1.09109195521536,2.7926744831047,0,5.17524655308201,1.20008329398946,6.18112269329027,9.76573517421165,0,0,0,0,11.5620022011259,0,0.244736704506468,1.07453304648892,0,0.657852148736121,0,0,0,0,0,0,0,0,0.132864840313363,0,2.94848863961771,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04208266241495,0,0,8.46422264857641,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,1.90691047733584,0,0,0,0.20170506870352,0,0,3.43921026771203,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0.857440047187092,0,0,0,0,0,0,0,3.65263488203798,0,0,0,0,6.04455411914251,0,0,0.62164849248911,0.6828739083758,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,11.59814431338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| |||
|short_description=p@chr13:38164537..38164581,- | |||
}} |
Revision as of 02:10, 11 September 2013
Short description: | p@chr13:38164537..38164581, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:38164537..38164581, - |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.61e-14 | 76 |
preadipocyte | 4.57e-14 | 12 |
multi fate stem cell | 7.80e-11 | 427 |
somatic stem cell | 2.19e-10 | 433 |
stem cell | 8.25e-10 | 441 |
cardiocyte | 2.95e-09 | 16 |
muscle precursor cell | 3.10e-08 | 58 |
myoblast | 3.10e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.10e-08 | 58 |
muscle cell | 5.69e-08 | 55 |
fibroblast of tunica adventitia of artery | 5.88e-08 | 4 |
fibroblast of the aortic adventitia | 5.88e-08 | 4 |
cardiac fibroblast | 8.43e-08 | 6 |
preadipocyte of the breast | 5.01e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.24e-08 | 62 |
striated muscle tissue | 2.24e-08 | 62 |
myotome | 2.24e-08 | 62 |
artery wall | 5.88e-08 | 4 |
tunica adventitia of artery | 5.88e-08 | 4 |
adventitia | 5.88e-08 | 4 |
tunica adventitia of blood vessel | 5.88e-08 | 4 |
aorta tunica adventitia | 5.88e-08 | 4 |
aorta wall | 5.88e-08 | 4 |
muscle tissue | 6.12e-08 | 64 |
musculature | 6.12e-08 | 64 |
musculature of body | 6.12e-08 | 64 |
splanchnic layer of lateral plate mesoderm | 6.44e-08 | 83 |
artery | 1.16e-07 | 42 |
arterial blood vessel | 1.16e-07 | 42 |
arterial system | 1.16e-07 | 42 |
dense mesenchyme tissue | 3.87e-07 | 73 |
systemic artery | 3.87e-07 | 33 |
systemic arterial system | 3.87e-07 | 33 |
heart | 8.64e-07 | 24 |
primitive heart tube | 8.64e-07 | 24 |
primary heart field | 8.64e-07 | 24 |
anterior lateral plate mesoderm | 8.64e-07 | 24 |
heart tube | 8.64e-07 | 24 |
heart primordium | 8.64e-07 | 24 |
cardiac mesoderm | 8.64e-07 | 24 |
cardiogenic plate | 8.64e-07 | 24 |
heart rudiment | 8.64e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.96e-11 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.