FFCP PHASE1:Hg19::chr15:38544361..38544372,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=161742|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20249|TSSclassifier=S|UniProt=Q7Z699|association_with_transcript=-154bp_to_ENST00000299084_5end|description=CAGE_peak_7_at_SPRED1_5end|id=chr15:38544361..38544372,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000235;2.60e-17;6!CL:0000840;6.55e-11;5!CL:0000047;8.43e-09;2!CL:0000097;1.37e-07;5!CL:0000990;2.75e-07;8|ontology_enrichment_celltype_v019_2=CL:0000235,2.74e-17,6;CL:0000557,7.88e-17,67;CL:0000839,3.45e-15,66;CL:0000766,1.37e-13,72;CL:0002009,5.45e-13,61;CL:0002194,9.56e-12,59;CL:0000576,9.56e-12,59;CL:0000040,9.56e-12,59;CL:0000559,9.56e-12,59;CL:0000840,2.16e-11,5;CL:0001029,2.16e-11,5;CL:0000763,7.90e-09,108;CL:0000049,7.90e-09,108;CL:0002031,1.73e-08,120;CL:0000097,1.08e-07,5;CL:0002028,1.08e-07,5;CL:0000990,1.34e-07,8;CL:0000738,5.49e-07,136|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!8.07e-11!115;UBERON:0000468!4.50e-10!659;UBERON:0000062!4.73e-10!511;UBERON:0002616!8.52e-10!59;UBERON:0000480!1.09e-09!626;UBERON:0000467!1.36e-09!625;UBERON:0003075!2.36e-09!86;UBERON:0007284!2.36e-09!86;UBERON:0000922!4.11e-09!612;UBERON:0001049!4.81e-09!57;UBERON:0005068!4.81e-09!57;UBERON:0006241!4.81e-09!57;UBERON:0007135!4.81e-09!57;UBERON:0002050!6.54e-09!605;UBERON:0005423!6.54e-09!605;UBERON:0000923!1.03e-08!604;UBERON:0005291!1.03e-08!604;UBERON:0006598!1.03e-08!604;UBERON:0002532!1.03e-08!604;UBERON:0002346!1.05e-08!90;UBERON:0001017!1.94e-08!82;UBERON:0000955!3.56e-08!69;UBERON:0006238!3.56e-08!69;UBERON:0005743!5.08e-08!86;UBERON:0001893!5.10e-08!34;UBERON:0002780!8.49e-08!41;UBERON:0001890!8.49e-08!41;UBERON:0006240!8.49e-08!41;UBERON:0002020!1.43e-07!34;UBERON:0003528!1.43e-07!34;UBERON:0002791!1.45e-07!33;UBERON:0000033!1.91e-07!123;UBERON:0001869!2.22e-07!32;UBERON:0003080!2.48e-07!42;UBERON:0004121!2.57e-07!169;UBERON:0000924!5.50e-07!173;UBERON:0006601!5.50e-07!173;UBERON:0000073!7.09e-07!94;UBERON:0001016!7.09e-07!94|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.50e-14,76;UBERON:0001474,5.76e-13,82;UBERON:0002390,1.75e-11,98;UBERON:0003061,1.75e-11,98;UBERON:0004765,1.96e-11,90;UBERON:0002405,6.28e-11,93;UBERON:0002193,5.28e-10,108;UBERON:0001434,7.21e-10,100;UBERON:0002204,6.48e-09,167|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.522371256399677,0.245733936501509,0.697801167972428,0,0.527533956456907,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0.273748850145768,0.125542639594803,0,0.0821005894499457,0.0787107813136792,0,0,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,1.34349284543955,0.32389366601898,2.57575567634187,0,0,0.485168122375632,0.232429036905685,0,0.309706370895104,0.863077176966451,0.512321413058201,0.945928919554341,0.344745680736619,0,1.35426486594342,0.188242339542605,0,0,0,0,0.639337125799041,0,0.598390972864896,0.426224750532694,0,0.56738522469114,0,0.251248665256743,1.0429658368404,1.08594422352558,0,0,0.949387162322653,1.05627643155971,0.850417199860174,0.209658645508376,0.112328631146495,0,0.16072558669708,0.855038231223746,2.78483348078726,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0,0.722878304769133,0,0,0.795285947051099,0.486634870302636,0.378139268656271,0.665188192387692,0.614843499851882,0.196468613246569,0,0,1.62273696827342,2.26368658489047,1.86141144726411,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.397227542439656,0.573673241497627,0,0,0,0,0,0.404132016209064,0.326923806226917,0.302714855289863,0,0,0,0.570471821544449,0.747243402759005,0.587172493218824,0.647491777472526,0.280901613404497,0.408308342509787,0.368502951935304,0.309977343527296,0,0.247266929278557,0,0,0.673344455816265,0.500474079487857,0.554128230968366,0.438977620880838,0.919463387397059,0.150238058906597,0.453728732640084,0.717558542755448,0.427114777637135,0,0.600182192168805,0,0.772921620136887,0.18611685633159,0.168776332241266,0.194874010322397,0.252433774244115,0.0920498986422993,0.323292113637624,0.355009592516614,0.302256294682921,0,0.193260853163297,0,0.286804595389004,0.365921118388786,0,0.116193942869518,0.414644220061482,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0,0,0.71181185733329,0,0.196221465125346,0,0,1.40241773803446,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0.219500570817251,0,0.100528972411631,0.277765335475589,0,1.03993478527958,0,0.463721619900307,0.352226082707465,0,0,0,0,0,5.41677413392274,1.40402559083543,2.67536092119711,0,0,0.141775097242386,0.358234090811393,0.290633938513962,0.383382679165211,0,0.088048434013226,1.4512968087854,1.29707958075265,1.38866676769018,0.190493682876507,0,2.34434894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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=161742 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20249 | |||
|TSSclassifier=S | |||
|UniProt=Q7Z699 | |||
|association_with_transcript=-154bp_to_ENST00000299084_5end | |||
|description=CAGE_peak_7_at_SPRED1_5end | |||
|id=chr15:38544361..38544372,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.60e-17;6!CL:0000840;6.55e-11;5!CL:0000047;8.43e-09;2!CL:0000097;1.37e-07;5!CL:0000990;2.75e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.74e-17,6;CL:0000557,7.88e-17,67;CL:0000839,3.45e-15,66;CL:0000766,1.37e-13,72;CL:0002009,5.45e-13,61;CL:0002194,9.56e-12,59;CL:0000576,9.56e-12,59;CL:0000040,9.56e-12,59;CL:0000559,9.56e-12,59;CL:0000840,2.16e-11,5;CL:0001029,2.16e-11,5;CL:0000763,7.90e-09,108;CL:0000049,7.90e-09,108;CL:0002031,1.73e-08,120;CL:0000097,1.08e-07,5;CL:0002028,1.08e-07,5;CL:0000990,1.34e-07,8;CL:0000738,5.49e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.07e-11!115;UBERON:0000468!4.50e-10!659;UBERON:0000062!4.73e-10!511;UBERON:0002616!8.52e-10!59;UBERON:0000480!1.09e-09!626;UBERON:0000467!1.36e-09!625;UBERON:0003075!2.36e-09!86;UBERON:0007284!2.36e-09!86;UBERON:0000922!4.11e-09!612;UBERON:0001049!4.81e-09!57;UBERON:0005068!4.81e-09!57;UBERON:0006241!4.81e-09!57;UBERON:0007135!4.81e-09!57;UBERON:0002050!6.54e-09!605;UBERON:0005423!6.54e-09!605;UBERON:0000923!1.03e-08!604;UBERON:0005291!1.03e-08!604;UBERON:0006598!1.03e-08!604;UBERON:0002532!1.03e-08!604;UBERON:0002346!1.05e-08!90;UBERON:0001017!1.94e-08!82;UBERON:0000955!3.56e-08!69;UBERON:0006238!3.56e-08!69;UBERON:0005743!5.08e-08!86;UBERON:0001893!5.10e-08!34;UBERON:0002780!8.49e-08!41;UBERON:0001890!8.49e-08!41;UBERON:0006240!8.49e-08!41;UBERON:0002020!1.43e-07!34;UBERON:0003528!1.43e-07!34;UBERON:0002791!1.45e-07!33;UBERON:0000033!1.91e-07!123;UBERON:0001869!2.22e-07!32;UBERON:0003080!2.48e-07!42;UBERON:0004121!2.57e-07!169;UBERON:0000924!5.50e-07!173;UBERON:0006601!5.50e-07!173;UBERON:0000073!7.09e-07!94;UBERON:0001016!7.09e-07!94 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.50e-14,76;UBERON:0001474,5.76e-13,82;UBERON:0002390,1.75e-11,98;UBERON:0003061,1.75e-11,98;UBERON:0004765,1.96e-11,90;UBERON:0002405,6.28e-11,93;UBERON:0002193,5.28e-10,108;UBERON:0001434,7.21e-10,100;UBERON:0002204,6.48e-09,167 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.522371256399677,0.245733936501509,0.697801167972428,0,0.527533956456907,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0.273748850145768,0.125542639594803,0,0.0821005894499457,0.0787107813136792,0,0,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,1.34349284543955,0.32389366601898,2.57575567634187,0,0,0.485168122375632,0.232429036905685,0,0.309706370895104,0.863077176966451,0.512321413058201,0.945928919554341,0.344745680736619,0,1.35426486594342,0.188242339542605,0,0,0,0,0.639337125799041,0,0.598390972864896,0.426224750532694,0,0.56738522469114,0,0.251248665256743,1.0429658368404,1.08594422352558,0,0,0.949387162322653,1.05627643155971,0.850417199860174,0.209658645508376,0.112328631146495,0,0.16072558669708,0.855038231223746,2.78483348078726,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0,0.722878304769133,0,0,0.795285947051099,0.486634870302636,0.378139268656271,0.665188192387692,0.614843499851882,0.196468613246569,0,0,1.62273696827342,2.26368658489047,1.86141144726411,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.397227542439656,0.573673241497627,0,0,0,0,0,0.404132016209064,0.326923806226917,0.302714855289863,0,0,0,0.570471821544449,0.747243402759005,0.587172493218824,0.647491777472526,0.280901613404497,0.408308342509787,0.368502951935304,0.309977343527296,0,0.247266929278557,0,0,0.673344455816265,0.500474079487857,0.554128230968366,0.438977620880838,0.919463387397059,0.150238058906597,0.453728732640084,0.717558542755448,0.427114777637135,0,0.600182192168805,0,0.772921620136887,0.18611685633159,0.168776332241266,0.194874010322397,0.252433774244115,0.0920498986422993,0.323292113637624,0.355009592516614,0.302256294682921,0,0.193260853163297,0,0.286804595389004,0.365921118388786,0,0.116193942869518,0.414644220061482,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0,0,0.71181185733329,0,0.196221465125346,0,0,1.40241773803446,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0.219500570817251,0,0.100528972411631,0.277765335475589,0,1.03993478527958,0,0.463721619900307,0.352226082707465,0,0,0,0,0,5.41677413392274,1.40402559083543,2.67536092119711,0,0,0.141775097242386,0.358234090811393,0.290633938513962,0.383382679165211,0,0.088048434013226,1.4512968087854,1.29707958075265,1.38866676769018,0.190493682876507,0,2.34434894420094,0,0.102827492703324,0,0,0.224262168690721,0.43596006883328,0.1466765716419,0.258543431515556,0,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,1.50719688529793,0,0.799783929456456,1.2162378064119,0.502257091432126,2.10833939483032,0.479249710983165,0,2.85273810081437,0.723906533337896,1.02738161275192,0.716243852959582,0,0,0,0,1.01637849688985,1.30139853857622,0.773288812777695,0.167516265334349,0,0.749007023947182,0,0,0,0,0.542530047399471,0.207970861530807,0.356857977594324,0,0,0.601892199455438,4.5481500811197,0,0,0.553107505625109,0.0868836144680828,0.391602314925481,0.343143423810856,0,0.215714200818617,0,0.303127571446259,0,0.30239029332968,0.248107807818777,0.61384789315225,0.561320188866147,0.128139149255701,0,0.321707842287215,0,0.462629081407967,1.06537035187876,0.739144404124282,0,1.04589340613963,0.120859449591622,0.200506470303285,0.828728900423067,0.459257792658427,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0,0,0.261435451024901,0.256450125116389,0,0,0,0,0.082509499920588,0.574265537996172,0,0,0.386682873168488,0.154048617114644,0,0.137836572484531,0.107420244868274,0.290033387828457,0.596586391912706,0.0890320356467374,0.165284915360978,0.192190067365106,0.765676274967505,0.2023155617111,0.464845549297286,0.62962469366128,1.3940745403212,0,1.06461206063404,0,0.18532421910392,0.572499546967965,0.372158369359667,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0,0.824686816419805,0.202182481573316,1.58510321173008,0,0,0.974853958525138,0,0.818999468447914,0.282810863907425,0,0,0,0.438450885253763,0,0,0.811641507850816,0,0.281695602532241,0.430234056612155,0.196498082026242,0,0,0.211107635297664,0,0.379473173765715,0.699869440489966,0.192444225451024,0,0,0.564862804660675,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,1.58625035258854,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.935702702041099,0.439524537815682,0.121360521749513,0,0,0,0,0,0.994147647766298,0.703347082052564,0.111308705022906,0.494411622680279,0,0.19924798825107,0.552567831062295,0,0,0.123084805461069,0.311039587661807,0,0.895105873378046,0,0,0,0,2.90799823828566,0.74214478529481,0,0,0.437299999980979,0,0.682760689712998,0,0,0,0.291604613383254,0,0,0.723578631752448,1.52581736317083,0.663475559587348,0.29554761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| |||
|short_description=p7@SPRED1 | |||
}} |
Revision as of 06:45, 11 September 2013
Short description: | p7@SPRED1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SPRED1_5end |
Coexpression cluster: | NA |
Association with transcript: | -154bp_to_ENST00000299084_5end |
EntrezGene: | SPRED1 |
HGNC: | 20249 |
UniProt: | Q7Z699 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.74e-17 | 6 |
granulocyte monocyte progenitor cell | 7.88e-17 | 67 |
myeloid lineage restricted progenitor cell | 3.45e-15 | 66 |
myeloid leukocyte | 1.37e-13 | 72 |
macrophage dendritic cell progenitor | 5.45e-13 | 61 |
monopoietic cell | 9.56e-12 | 59 |
monocyte | 9.56e-12 | 59 |
monoblast | 9.56e-12 | 59 |
promonocyte | 9.56e-12 | 59 |
immature conventional dendritic cell | 2.16e-11 | 5 |
common dendritic progenitor | 2.16e-11 | 5 |
myeloid cell | 7.90e-09 | 108 |
common myeloid progenitor | 7.90e-09 | 108 |
hematopoietic lineage restricted progenitor cell | 1.73e-08 | 120 |
mast cell | 1.08e-07 | 5 |
basophil mast progenitor cell | 1.08e-07 | 5 |
conventional dendritic cell | 1.34e-07 | 8 |
leukocyte | 5.49e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.50e-14 | 76 |
bone element | 5.76e-13 | 82 |
hematopoietic system | 1.75e-11 | 98 |
blood island | 1.75e-11 | 98 |
skeletal element | 1.96e-11 | 90 |
immune system | 6.28e-11 | 93 |
hemolymphoid system | 5.28e-10 | 108 |
skeletal system | 7.21e-10 | 100 |
musculoskeletal system | 6.48e-09 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.