FFCP PHASE1:Hg19::chr17:45286476..45286481,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4635|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7585|TSSclassifier=S|UniProt=P12829|association_with_transcript=48bp_to_ENST00000354968,NM_001002841,uc002ilg.2_5end|coexpression_cluster_id=C3644|description=CAGE_peak_3_at_MYL4_5end|id=chr17:45286476..45286481,+|ontology_enrichment_celltype=CL:0000764!5.54e-11!2;CL:0000765!5.54e-11!2;CL:0000050!5.54e-11!2;CL:0000038!5.54e-11!2;CL:0000558!5.54e-11!2;CL:0000547!5.54e-11!2;CL:0000549!5.54e-11!2;CL:0000550!5.54e-11!2;CL:0000552!5.54e-11!2|ontology_enrichment_celltype_v019=CL:0000764;1.88e-23;2!CL:0000558;1.88e-23;2|ontology_enrichment_celltype_v019_2=CL:0000764,1.42e-23,2;CL:0000765,1.42e-23,2;CL:0000050,1.42e-23,2;CL:0000038,1.42e-23,2;CL:0000558,1.42e-23,2;CL:0000547,1.42e-23,2;CL:0000549,1.42e-23,2;CL:0000550,1.42e-23,2;CL:0000552,1.42e-23,2|ontology_enrichment_development_v019=UBERON:0010227;7.03e-13;1!UBERON:0004140;1.86e-12;1!UBERON:0005062;4.44e-12;4!UBERON:0007284;4.44e-12;4|ontology_enrichment_disease=DOID:1036!3.24e-20!8;DOID:8692!2.10e-10!31;DOID:1240!5.89e-08!39|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003978!4.33e-15!3;UBERON:0009751!4.33e-15!3;UBERON:0000946!4.33e-15!3;UBERON:0002523!4.33e-15!3;UBERON:0005983!4.33e-15!3;UBERON:0002165!4.33e-15!3;UBERON:0002062!4.33e-15!3;UBERON:0007280!4.33e-15!3;UBERON:0002081!7.40e-11!2;UBERON:0002133!7.77e-11!2;UBERON:0007100!1.15e-07!27;UBERON:0004151!1.67e-07!3|ontology_enrichment_uberon_v019=UBERON:0002081;2.95e-23;2!UBERON:0002133;3.69e-23;2!UBERON:0004151;7.54e-16;3!UBERON:0003978;8.76e-16;3!UBERON:0000946;8.76e-16;3!UBERON:0002079;7.03e-13;1!UBERON:0002135;8.84e-13;1!UBERON:0002426;1.86e-12;1!UBERON:0003831;1.86e-12;1!UBERON:0003898;1.86e-12;1!UBERON:0004830;1.86e-12;1!UBERON:0003830;1.86e-12;1!UBERON:0005175;1.86e-12;1!UBERON:0001774;1.86e-12;1!UBERON:0001103;1.86e-12;1!UBERON:0002134;3.64e-12;1!UBERON:0005208;3.64e-12;1!UBERON:0004145;3.64e-12;1!UBERON:0005946;3.64e-12;1!UBERON:0005965;3.64e-12;1!UBERON:0002078;3.64e-12;1!UBERON:0000948;2.20e-08;22!UBERON:0007100;2.13e-07;25!UBERON:0001905;7.40e-07;2!UBERON:0005090;7.40e-07;2!UBERON:0001630;7.40e-07;2!UBERON:0002757;7.40e-07;2!UBERON:0010134;7.40e-07;2!UBERON:0005408;7.40e-07;2!UBERON:0001899;7.40e-07;2!UBERON:0001134;7.76e-07;16!UBERON:0002036;7.76e-07;16|ontology_enrichment_uberon_v019_2=UBERON:0002081,2.79e-23,2;UBERON:0010227,2.79e-23,2;UBERON:0002133,3.12e-23,2;UBERON:0004151,7.27e-16,3;UBERON:0003978,7.83e-16,3;UBERON:0009751,7.83e-16,3;UBERON:0000946,7.83e-16,3;UBERON:0002523,7.83e-16,3;UBERON:0005983,7.83e-16,3;UBERON:0002165,7.83e-16,3;UBERON:0002062,7.83e-16,3;UBERON:0007280,7.83e-16,3;UBERON:0002079,7.03e-13,1;UBERON:0002135,7.89e-13,1;UBERON:0002426,1.75e-12,1;UBERON:0003831,1.75e-12,1;UBERON:0003898,1.75e-12,1;UBERON:0004830,1.75e-12,1;UBERON:0003830,1.75e-12,1;UBERON:0005175,1.75e-12,1;UBERON:0001774,1.75e-12,1;UBERON:0001103,1.75e-12,1;UBERON:0010084,1.75e-12,1;UBERON:0002134,3.45e-12,1;UBERON:0005208,3.45e-12,1;UBERON:0005946,3.45e-12,1;UBERON:0005965,3.45e-12,1;UBERON:0002078,3.45e-12,1;UBERON:0000948,1.06e-07,24;UBERON:0005498,1.06e-07,24;UBERON:0004140,1.06e-07,24;UBERON:0009881,1.06e-07,24;UBERON:0004141,1.06e-07,24;UBERON:0003084,1.06e-07,24;UBERON:0007005,1.06e-07,24;UBERON:0004139,1.06e-07,24;UBERON:0004291,1.06e-07,24;UBERON:0004797,2.69e-07,7;UBERON:0001905,6.80e-07,2;UBERON:0002757,6.80e-07,2;UBERON:0010134,6.80e-07,2;UBERON:0005408,6.80e-07,2;UBERON:0001899,6.80e-07,2;UBERON:0005090,7.20e-07,2;UBERON:0001630,7.20e-07,2;UBERON:0007100,7.35e-07,27|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37257369524342,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85037839639715,4.18296721639841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,3.02708921198907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664846727600626,1.80476528493745,1.1763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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4635 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7585 | |||
|TSSclassifier=S | |||
|UniProt=P12829 | |||
|association_with_transcript=48bp_to_ENST00000354968,NM_001002841,uc002ilg.2_5end | |||
|coexpression_cluster_id=C3644 | |||
|description=CAGE_peak_3_at_MYL4_5end | |||
|id=chr17:45286476..45286481,+ | |||
|ontology_enrichment_celltype=CL:0000764!5.54e-11!2;CL:0000765!5.54e-11!2;CL:0000050!5.54e-11!2;CL:0000038!5.54e-11!2;CL:0000558!5.54e-11!2;CL:0000547!5.54e-11!2;CL:0000549!5.54e-11!2;CL:0000550!5.54e-11!2;CL:0000552!5.54e-11!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.88e-23;2!CL:0000558;1.88e-23;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.42e-23,2;CL:0000765,1.42e-23,2;CL:0000050,1.42e-23,2;CL:0000038,1.42e-23,2;CL:0000558,1.42e-23,2;CL:0000547,1.42e-23,2;CL:0000549,1.42e-23,2;CL:0000550,1.42e-23,2;CL:0000552,1.42e-23,2 | |||
|ontology_enrichment_development_v019=UBERON:0010227;7.03e-13;1!UBERON:0004140;1.86e-12;1!UBERON:0005062;4.44e-12;4!UBERON:0007284;4.44e-12;4 | |||
|ontology_enrichment_disease=DOID:1036!3.24e-20!8;DOID:8692!2.10e-10!31;DOID:1240!5.89e-08!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!4.33e-15!3;UBERON:0009751!4.33e-15!3;UBERON:0000946!4.33e-15!3;UBERON:0002523!4.33e-15!3;UBERON:0005983!4.33e-15!3;UBERON:0002165!4.33e-15!3;UBERON:0002062!4.33e-15!3;UBERON:0007280!4.33e-15!3;UBERON:0002081!7.40e-11!2;UBERON:0002133!7.77e-11!2;UBERON:0007100!1.15e-07!27;UBERON:0004151!1.67e-07!3 | |||
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|short_description=p3@MYL4 | |||
}} |
Revision as of 14:08, 11 September 2013
Short description: | p3@MYL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MYL4_5end |
Coexpression cluster: | C3644_skeletal_left_Skeletal_heart_Reticulocytes_Pericytes_pineal |
Association with transcript: | 48bp_to_ENST00000354968, NM_001002841, uc002ilg.2_5end |
EntrezGene: | MYL4 |
HGNC: | 7585 |
UniProt: | P12829 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.42e-23 | 2 |
erythroblast | 1.42e-23 | 2 |
megakaryocyte-erythroid progenitor cell | 1.42e-23 | 2 |
erythroid progenitor cell | 1.42e-23 | 2 |
reticulocyte | 1.42e-23 | 2 |
proerythroblast | 1.42e-23 | 2 |
basophilic erythroblast | 1.42e-23 | 2 |
polychromatophilic erythroblast | 1.42e-23 | 2 |
orthochromatic erythroblast | 1.42e-23 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.