FFCP PHASE1:Hg19::chr17:76492734..76492735,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_uc002jvt.1_5end|coexpression_cluster_id=C3155|description=CAGE_peak_3_at_uc002jvt.1_5end|id=chr17:76492734..76492735,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006222;4.66e-66;1!UBERON:0006241;3.27e-23;3!UBERON:0003057;3.27e-23;3!UBERON:0006601;1.35e-08;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.82e-47!57;UBERON:0005068!3.82e-47!57;UBERON:0006241!3.82e-47!57;UBERON:0007135!3.82e-47!57;UBERON:0001017!6.76e-36!82;UBERON:0002616!5.54e-35!59;UBERON:0005743!3.73e-34!86;UBERON:0000955!1.95e-33!69;UBERON:0006238!1.95e-33!69;UBERON:0003076!2.76e-32!15;UBERON:0003057!2.76e-32!15;UBERON:0002298!2.47e-31!8;UBERON:0000073!9.24e-31!94;UBERON:0001016!9.24e-31!94;UBERON:0003075!1.18e-30!86;UBERON:0007284!1.18e-30!86;UBERON:0000988!2.24e-30!3;UBERON:0002346!3.35e-29!90;UBERON:0007023!1.59e-25!115;UBERON:0002780!3.73e-22!41;UBERON:0001890!3.73e-22!41;UBERON:0006240!3.73e-22!41;UBERON:0003080!1.31e-21!42;UBERON:0002148!5.20e-21!2;UBERON:0009662!5.20e-21!2;UBERON:0004733!6.76e-21!12;UBERON:0002028!6.76e-21!12;UBERON:0007277!6.76e-21!12;UBERON:0000033!1.65e-20!123;UBERON:0000153!1.86e-19!129;UBERON:0007811!1.86e-19!129;UBERON:0004732!2.75e-19!13;UBERON:0002020!4.17e-17!34;UBERON:0003528!4.17e-17!34;UBERON:0001893!4.97e-17!34;UBERON:0004121!3.03e-16!169;UBERON:0000924!8.12e-16!173;UBERON:0006601!8.12e-16!173;UBERON:0001896!1.08e-14!3;UBERON:0005290!1.08e-14!3;UBERON:0010096!1.08e-14!3;UBERON:0002240!1.23e-14!3;UBERON:0003056!1.45e-14!61;UBERON:0006331!2.42e-14!3;UBERON:0001869!6.93e-14!32;UBERON:0002791!1.52e-13!33;UBERON:0000025!2.71e-12!194;UBERON:0001950!1.49e-11!20;UBERON:0002336!1.97e-11!1;UBERON:0001018!1.97e-11!1;UBERON:0002473!1.97e-11!1;UBERON:0005340!1.97e-11!1;UBERON:0002316!1.97e-11!1;UBERON:0003544!1.97e-11!1;UBERON:0001020!1.97e-11!1;UBERON:0005970!1.97e-11!1;UBERON:0002437!1.97e-11!1;UBERON:0003112!2.96e-11!1;UBERON:0000032!2.96e-11!1;UBERON:0005253!2.96e-11!1;UBERON:0003128!2.96e-11!1;UBERON:0002241!2.96e-11!1;UBERON:0001703!2.96e-11!1;UBERON:0004761!2.96e-11!1;UBERON:0009617!2.96e-11!1;UBERON:0007190!5.43e-11!1;UBERON:0002581!6.00e-11!1;UBERON:0002308!1.14e-10!9;UBERON:0000125!1.14e-10!9;UBERON:0002680!1.53e-10!9;UBERON:0001895!1.53e-10!9;UBERON:0010092!1.53e-10!9;UBERON:0002619!1.53e-10!22;UBERON:0004111!2.15e-09!241;UBERON:0000956!2.60e-09!25;UBERON:0000203!2.60e-09!25;UBERON:0005174!3.83e-09!5;UBERON:0001137!3.83e-09!5;UBERON:0002021!6.70e-09!5;UBERON:0001872!1.12e-08!5;UBERON:0000477!1.19e-08!286;UBERON:0000200!2.41e-07!6;UBERON:0000475!4.07e-07!365;UBERON:0001894!8.61e-07!7;UBERON:0006222!8.61e-07!7;UBERON:0000483!9.72e-07!309|ontology_enrichment_uberon_v019=UBERON:0001896;2.62e-23;3!UBERON:0005290;2.62e-23;3!UBERON:0002240;3.27e-23;3!UBERON:0005174;3.27e-23;3!UBERON:0001137;3.27e-23;3!UBERON:0002298;2.19e-12;6!UBERON:0001894;9.89e-11;7!UBERON:0004733;7.48e-07;12!UBERON:0002028;7.48e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.62e-23,3;UBERON:0005290,2.62e-23,3;UBERON:0010096,2.62e-23,3;UBERON:0002240,3.27e-23,3;UBERON:0005174,3.27e-23,3;UBERON:0001137,3.27e-23,3;UBERON:0003076,1.04e-18,15;UBERON:0003057,1.04e-18,15;UBERON:0002298,2.19e-12,6;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0001894,9.89e-11,7;UBERON:0006222,9.89e-11,7;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89;UBERON:0004733,7.48e-07,12;UBERON:0002028,7.48e-07,12;UBERON:0007277,7.48e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002jvt.1_5end | |||
|coexpression_cluster_id=C3155 | |||
|description=CAGE_peak_3_at_uc002jvt.1_5end | |||
|id=chr17:76492734..76492735,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;4.66e-66;1!UBERON:0006241;3.27e-23;3!UBERON:0003057;3.27e-23;3!UBERON:0006601;1.35e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.82e-47!57;UBERON:0005068!3.82e-47!57;UBERON:0006241!3.82e-47!57;UBERON:0007135!3.82e-47!57;UBERON:0001017!6.76e-36!82;UBERON:0002616!5.54e-35!59;UBERON:0005743!3.73e-34!86;UBERON:0000955!1.95e-33!69;UBERON:0006238!1.95e-33!69;UBERON:0003076!2.76e-32!15;UBERON:0003057!2.76e-32!15;UBERON:0002298!2.47e-31!8;UBERON:0000073!9.24e-31!94;UBERON:0001016!9.24e-31!94;UBERON:0003075!1.18e-30!86;UBERON:0007284!1.18e-30!86;UBERON:0000988!2.24e-30!3;UBERON:0002346!3.35e-29!90;UBERON:0007023!1.59e-25!115;UBERON:0002780!3.73e-22!41;UBERON:0001890!3.73e-22!41;UBERON:0006240!3.73e-22!41;UBERON:0003080!1.31e-21!42;UBERON:0002148!5.20e-21!2;UBERON:0009662!5.20e-21!2;UBERON:0004733!6.76e-21!12;UBERON:0002028!6.76e-21!12;UBERON:0007277!6.76e-21!12;UBERON:0000033!1.65e-20!123;UBERON:0000153!1.86e-19!129;UBERON:0007811!1.86e-19!129;UBERON:0004732!2.75e-19!13;UBERON:0002020!4.17e-17!34;UBERON:0003528!4.17e-17!34;UBERON:0001893!4.97e-17!34;UBERON:0004121!3.03e-16!169;UBERON:0000924!8.12e-16!173;UBERON:0006601!8.12e-16!173;UBERON:0001896!1.08e-14!3;UBERON:0005290!1.08e-14!3;UBERON:0010096!1.08e-14!3;UBERON:0002240!1.23e-14!3;UBERON:0003056!1.45e-14!61;UBERON:0006331!2.42e-14!3;UBERON:0001869!6.93e-14!32;UBERON:0002791!1.52e-13!33;UBERON:0000025!2.71e-12!194;UBERON:0001950!1.49e-11!20;UBERON:0002336!1.97e-11!1;UBERON:0001018!1.97e-11!1;UBERON:0002473!1.97e-11!1;UBERON:0005340!1.97e-11!1;UBERON:0002316!1.97e-11!1;UBERON:0003544!1.97e-11!1;UBERON:0001020!1.97e-11!1;UBERON:0005970!1.97e-11!1;UBERON:0002437!1.97e-11!1;UBERON:0003112!2.96e-11!1;UBERON:0000032!2.96e-11!1;UBERON:0005253!2.96e-11!1;UBERON:0003128!2.96e-11!1;UBERON:0002241!2.96e-11!1;UBERON:0001703!2.96e-11!1;UBERON:0004761!2.96e-11!1;UBERON:0009617!2.96e-11!1;UBERON:0007190!5.43e-11!1;UBERON:0002581!6.00e-11!1;UBERON:0002308!1.14e-10!9;UBERON:0000125!1.14e-10!9;UBERON:0002680!1.53e-10!9;UBERON:0001895!1.53e-10!9;UBERON:0010092!1.53e-10!9;UBERON:0002619!1.53e-10!22;UBERON:0004111!2.15e-09!241;UBERON:0000956!2.60e-09!25;UBERON:0000203!2.60e-09!25;UBERON:0005174!3.83e-09!5;UBERON:0001137!3.83e-09!5;UBERON:0002021!6.70e-09!5;UBERON:0001872!1.12e-08!5;UBERON:0000477!1.19e-08!286;UBERON:0000200!2.41e-07!6;UBERON:0000475!4.07e-07!365;UBERON:0001894!8.61e-07!7;UBERON:0006222!8.61e-07!7;UBERON:0000483!9.72e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;2.62e-23;3!UBERON:0005290;2.62e-23;3!UBERON:0002240;3.27e-23;3!UBERON:0005174;3.27e-23;3!UBERON:0001137;3.27e-23;3!UBERON:0002298;2.19e-12;6!UBERON:0001894;9.89e-11;7!UBERON:0004733;7.48e-07;12!UBERON:0002028;7.48e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.62e-23,3;UBERON:0005290,2.62e-23,3;UBERON:0010096,2.62e-23,3;UBERON:0002240,3.27e-23,3;UBERON:0005174,3.27e-23,3;UBERON:0001137,3.27e-23,3;UBERON:0003076,1.04e-18,15;UBERON:0003057,1.04e-18,15;UBERON:0002298,2.19e-12,6;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0001894,9.89e-11,7;UBERON:0006222,9.89e-11,7;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89;UBERON:0004733,7.48e-07,12;UBERON:0002028,7.48e-07,12;UBERON:0007277,7.48e-07,12 | |||
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|short_description=p3@uc002jvt.1 | |||
}} |
Revision as of 16:06, 11 September 2013
Short description: | p3@uc002jvt.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_uc002jvt.1_5end |
Coexpression cluster: | C3155_medulla_spinal_diencephalon_corpus_locus_globus_parietal |
Association with transcript: | 0bp_to_uc002jvt.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 2.62e-23 | 3 |
myelencephalon | 2.62e-23 | 3 |
future myelencephalon | 2.62e-23 | 3 |
spinal cord | 3.27e-23 | 3 |
dorsal region element | 3.27e-23 | 3 |
dorsum | 3.27e-23 | 3 |
posterior neural tube | 1.04e-18 | 15 |
chordal neural plate | 1.04e-18 | 15 |
brainstem | 2.19e-12 | 6 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
diencephalon | 9.89e-11 | 7 |
future diencephalon | 9.89e-11 | 7 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |
segmental subdivision of hindbrain | 7.48e-07 | 12 |
hindbrain | 7.48e-07 | 12 |
presumptive hindbrain | 7.48e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.