FFCP PHASE1:Hg19::chr18:74845672..74845681,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4155|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6925|TSSclassifier=S|UniProt=|association_with_transcript=-33bp_to_ENST00000490754,ENST00000497479_5end|coexpression_cluster_id=C1631|description=CAGE_peak_42_at_MBP_5end|id=chr18:74845672..74845681,-|ontology_enrichment_celltype=CL:0000763!3.77e-23!112;CL:0000049!3.77e-23!112;CL:0000557!2.76e-20!71;CL:0002194!1.80e-19!63;CL:0000576!1.80e-19!63;CL:0000040!1.80e-19!63;CL:0000559!1.80e-19!63;CL:0000839!3.40e-19!70;CL:0002009!1.48e-18!65;CL:0000766!3.70e-18!76;CL:0000037!7.97e-16!172;CL:0000566!7.97e-16!172;CL:0000988!4.73e-14!182;CL:0002032!7.30e-14!165;CL:0000837!7.30e-14!165;CL:0000148!3.17e-13!10;CL:0000541!3.17e-13!10;CL:0000738!1.97e-09!140;CL:0002087!4.36e-09!119;CL:0002031!4.79e-09!124;CL:0000147!8.93e-09!14;CL:0000325!9.24e-07!39|ontology_enrichment_celltype_v019=CL:0000148;3.79e-48;10!CL:0000147;2.99e-34;14!CL:0002567;1.86e-31;3!CL:0000235;3.38e-27;6!CL:0000710;8.27e-24;20!CL:0000075;1.77e-17;27!CL:0002077;3.22e-12;34!CL:0002032;1.69e-11;1!CL:0000557;1.69e-11;1!CL:0002566;3.63e-11;1|ontology_enrichment_celltype_v019_2=CL:0000148,1.81e-48,10;CL:0000541,1.81e-48,10;CL:0000147,1.77e-34,14;CL:0002567,1.60e-31,3;CL:0000235,3.74e-27,6;CL:0000710,5.76e-24,20;CL:0000075,1.36e-17,27;CL:0002077,7.77e-14,34;CL:0002566,4.01e-11,1;CL:0000333,8.51e-11,41;CL:0000763,9.86e-08,108;CL:0000049,9.86e-08,108;CL:0000133,2.12e-07,59|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:8692!5.88e-10!31;DOID:1240!2.97e-09!39|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!6.51e-18!80;UBERON:0002390!7.31e-17!102;UBERON:0003061!7.31e-17!102;UBERON:0001474!7.75e-17!86;UBERON:0002193!4.98e-15!112;UBERON:0004765!1.13e-12!101;UBERON:0001434!1.13e-12!101;UBERON:0002405!1.42e-12!115;UBERON:0002204!9.64e-08!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0.553995408531877,0.200544447470142,0,0.895661896959697,0.647787332037959,1.03030227053675,0.726991193897824,0,0.485168122375632,0.232429036905685,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0.502497330513487,0.521482918420201,0,0,0,0,0,0,0.419317291016752,0.112328631146495,0.300353785683013,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.522389211897802,0.531831842075461,1.19245312152671,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0,0.829312462163088,0,0.37872730027914,1.33345578013555,2.67391897890794,4.68869788840188,5.13217338068116,1.54241239054985,1.8020583470635,1.71495859578347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,3.01354254859276,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0.384417447767103,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0.577076851905779,0,0,0.59873811429845,0.191505370132367,0.635020748171649,0,0.842391534340376,3.87998954356427,1.09675927041116,2.50634477090067,0.338583555603207,0.642352300414798,0.605399121573143,0,0.343505344755765,0.307240764308458,0.894704431569664,0.667396566847634,0.390776190804081,0,0,0,0,0,0,1.02555725490326,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0.134802265961354,0,0,0,0,0.242780379534093,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0.0882561266915003,0.451961481561065,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0.687481272035051,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0.1375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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4155 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6925 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-33bp_to_ENST00000490754,ENST00000497479_5end | |||
|coexpression_cluster_id=C1631 | |||
|description=CAGE_peak_42_at_MBP_5end | |||
|id=chr18:74845672..74845681,- | |||
|ontology_enrichment_celltype=CL:0000763!3.77e-23!112;CL:0000049!3.77e-23!112;CL:0000557!2.76e-20!71;CL:0002194!1.80e-19!63;CL:0000576!1.80e-19!63;CL:0000040!1.80e-19!63;CL:0000559!1.80e-19!63;CL:0000839!3.40e-19!70;CL:0002009!1.48e-18!65;CL:0000766!3.70e-18!76;CL:0000037!7.97e-16!172;CL:0000566!7.97e-16!172;CL:0000988!4.73e-14!182;CL:0002032!7.30e-14!165;CL:0000837!7.30e-14!165;CL:0000148!3.17e-13!10;CL:0000541!3.17e-13!10;CL:0000738!1.97e-09!140;CL:0002087!4.36e-09!119;CL:0002031!4.79e-09!124;CL:0000147!8.93e-09!14;CL:0000325!9.24e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.79e-48;10!CL:0000147;2.99e-34;14!CL:0002567;1.86e-31;3!CL:0000235;3.38e-27;6!CL:0000710;8.27e-24;20!CL:0000075;1.77e-17;27!CL:0002077;3.22e-12;34!CL:0002032;1.69e-11;1!CL:0000557;1.69e-11;1!CL:0002566;3.63e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.81e-48,10;CL:0000541,1.81e-48,10;CL:0000147,1.77e-34,14;CL:0002567,1.60e-31,3;CL:0000235,3.74e-27,6;CL:0000710,5.76e-24,20;CL:0000075,1.36e-17,27;CL:0002077,7.77e-14,34;CL:0002566,4.01e-11,1;CL:0000333,8.51e-11,41;CL:0000763,9.86e-08,108;CL:0000049,9.86e-08,108;CL:0000133,2.12e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!5.88e-10!31;DOID:1240!2.97e-09!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.51e-18!80;UBERON:0002390!7.31e-17!102;UBERON:0003061!7.31e-17!102;UBERON:0001474!7.75e-17!86;UBERON:0002193!4.98e-15!112;UBERON:0004765!1.13e-12!101;UBERON:0001434!1.13e-12!101;UBERON:0002405!1.42e-12!115;UBERON:0002204!9.64e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0.553995408531877,0.200544447470142,0,0.895661896959697,0.647787332037959,1.03030227053675,0.726991193897824,0,0.485168122375632,0.232429036905685,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0.502497330513487,0.521482918420201,0,0,0,0,0,0,0.419317291016752,0.112328631146495,0.300353785683013,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.522389211897802,0.531831842075461,1.19245312152671,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0,0.829312462163088,0,0.37872730027914,1.33345578013555,2.67391897890794,4.68869788840188,5.13217338068116,1.54241239054985,1.8020583470635,1.71495859578347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,3.01354254859276,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0.384417447767103,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0.577076851905779,0,0,0.59873811429845,0.191505370132367,0.635020748171649,0,0.842391534340376,3.87998954356427,1.09675927041116,2.50634477090067,0.338583555603207,0.642352300414798,0.605399121573143,0,0.343505344755765,0.307240764308458,0.894704431569664,0.667396566847634,0.390776190804081,0,0,0,0,0,0,1.02555725490326,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0.134802265961354,0,0,0,0,0.242780379534093,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0.0882561266915003,0.451961481561065,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0.687481272035051,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,0,0.7520696820681,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73495839002757,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.0757786982182394,0,0,0.103432995861895,0,0,0.0645889098360061,0.0620747142958579,0,0,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0.665320713092027,0,0,0,0,0,0.488965776731466,0,0,0,0 | |||
|short_description=p42@MBP | |||
}} |
Revision as of 18:20, 11 September 2013
Short description: | p42@MBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_42_at_MBP_5end |
Coexpression cluster: | C1631_Monocytederived_Melanocyte_CD14_Macrophage_Mast_Mesenchymal_Fibroblast |
Association with transcript: | -33bp_to_ENST00000490754, ENST00000497479_5end |
EntrezGene: | MBP |
HGNC: | 6925 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.81e-48 | 10 |
melanoblast | 1.81e-48 | 10 |
pigment cell | 1.77e-34 | 14 |
light melanocyte | 1.60e-31 | 3 |
macrophage | 3.74e-27 | 6 |
neurecto-epithelial cell | 5.76e-24 | 20 |
columnar/cuboidal epithelial cell | 1.36e-17 | 27 |
ecto-epithelial cell | 7.77e-14 | 34 |
dark melanocyte | 4.01e-11 | 1 |
migratory neural crest cell | 8.51e-11 | 41 |
myeloid cell | 9.86e-08 | 108 |
common myeloid progenitor | 9.86e-08 | 108 |
neurectodermal cell | 2.12e-07 | 59 |
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