FFCP PHASE1:Hg19::chr19:49140645..49140654,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1628|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2697|TSSclassifier=S|UniProt=Q10586,Q59HF2|association_with_transcript=-6bp_to_ENST00000222122,NM_001352,uc002pjx.3,uc002pjy.2,uc010elz.1_5end|description=CAGE_peak_6_at_DBP_5end|id=chr19:49140645..49140654,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;5.83e-13;3!UBERON:0006601;5.18e-07;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.51e-22!115;UBERON:0001049!2.69e-17!57;UBERON:0005068!2.69e-17!57;UBERON:0006241!2.69e-17!57;UBERON:0007135!2.69e-17!57;UBERON:0002616!1.89e-14!59;UBERON:0000955!3.63e-14!69;UBERON:0006238!3.63e-14!69;UBERON:0002780!8.48e-14!41;UBERON:0001890!8.48e-14!41;UBERON:0006240!8.48e-14!41;UBERON:0001017!1.44e-13!82;UBERON:0005743!1.45e-13!86;UBERON:0003080!4.23e-13!42;UBERON:0002346!4.58e-13!90;UBERON:0000073!5.90e-13!94;UBERON:0001016!5.90e-13!94;UBERON:0003075!1.64e-12!86;UBERON:0007284!1.64e-12!86;UBERON:0001893!1.94e-11!34;UBERON:0002020!5.69e-11!34;UBERON:0003528!5.69e-11!34;UBERON:0002791!5.96e-11!33;UBERON:0001869!2.19e-10!32;UBERON:0003056!2.06e-09!61;UBERON:0000153!7.83e-09!129;UBERON:0007811!7.83e-09!129;UBERON:0001950!9.56e-09!20;UBERON:0002619!1.87e-08!22;UBERON:0000033!2.22e-08!123;UBERON:0000956!8.36e-08!25;UBERON:0000203!8.36e-08!25|ontology_enrichment_uberon_v019=UBERON:0001893;1.74e-12;34!UBERON:0002780;1.75e-12;41!UBERON:0001890;1.75e-12;41!UBERON:0001869;3.77e-11;32!UBERON:0002791;4.01e-11;32!UBERON:0000073;7.23e-11;53!UBERON:0002616;7.23e-11;53!UBERON:0001950;1.10e-10;20!UBERON:0003528;3.08e-10;34!UBERON:0002020;3.08e-10;34!UBERON:0002619;1.22e-09;22!UBERON:0000369;3.50e-09;4!UBERON:0002435;3.50e-09;4!UBERON:0000204;3.50e-09;4!UBERON:0000955;4.37e-09;68!UBERON:0001017;5.00e-09;75!UBERON:0001905;1.28e-08;2!UBERON:0002757;1.28e-08;2!UBERON:0010134;1.28e-08;2!UBERON:0005408;1.28e-08;2!UBERON:0001899;1.28e-08;2!UBERON:0000956;2.22e-08;25!UBERON:0000203;2.22e-08;25!UBERON:0007023;4.10e-08;114!UBERON:0001016;6.93e-07;83|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.61e-22,114;UBERON:0001049,3.53e-20,56;UBERON:0005068,3.53e-20,56;UBERON:0006241,3.53e-20,56;UBERON:0007135,3.53e-20,56;UBERON:0000073,4.06e-19,53;UBERON:0002616,4.06e-19,53;UBERON:0002780,2.81e-17,41;UBERON:0001890,2.81e-17,41;UBERON:0003080,2.81e-17,41;UBERON:0006240,2.81e-17,41;UBERON:0001017,1.14e-15,81;UBERON:0000955,1.19e-15,68;UBERON:0006238,1.19e-15,68;UBERON:0002346,1.24e-14,86;UBERON:0003075,5.32e-14,82;UBERON:0007284,5.32e-14,82;UBERON:0001016,1.21e-13,89;UBERON:0001893,2.10e-13,34;UBERON:0003056,2.92e-12,61;UBERON:0002791,5.92e-12,32;UBERON:0001869,5.92e-12,32;UBERON:0003528,3.83e-11,34;UBERON:0002020,3.83e-11,34;UBERON:0001950,1.70e-10,20;UBERON:0010371,4.36e-10,104;UBERON:0000369,1.77e-09,4;UBERON:0002435,1.77e-09,4;UBERON:0000204,1.77e-09,4;UBERON:0010082,1.77e-09,4;UBERON:0002619,1.80e-09,22;UBERON:0001905,1.82e-08,2;UBERON:0002757,1.82e-08,2;UBERON:0010134,1.82e-08,2;UBERON:0005408,1.82e-08,2;UBERON:0001899,1.82e-08,2;UBERON:0000956,3.12e-08,25;UBERON:0000203,3.12e-08,25;UBERON:0004121,4.30e-08,171;UBERON:0000924,4.30e-08,171;UBERON:0006601,4.30e-08,171;UBERON:0010314,4.99e-07,132;UBERON:0002037,9.88e-07,6;UBERON:0006215,9.88e-07,6|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.495065411840187,0.662794751455832,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0.136874425072884,0.251085279189606,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0.383829398097213,0.464448369948228,0,0,0,0.0774672005803016,0.142169232487422,0.293600439334847,0.553995408531877,0.401088894940283,0.434021741431704,0.895661896959697,0,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633765858935825,0.212604299965044,0.628975936525128,0.786300418025466,0.750884464207532,0.16072558669708,0.570025487482497,1.19350006319454,0,0,0,0.889509253863555,0.853460445133014,0,1.14950487990897,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0,0,0.384273959177026,0.130059347559878,0.164437904603676,0.276350017785848,0,0.14828656316206,0.267540828089713,0,0,0,0.34362744548263,0,0,0.651083453856419,0.950452044448374,0.602300476311091,0.127986611154418,1.24930726552346,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0.221729397462564,0.351339142772504,0.851363990735132,0,0.370784442784429,0,0.348259474598534,0.531831842075461,0,0,0,0,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0.14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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1628 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2697 | |||
|TSSclassifier=S | |||
|UniProt=Q10586,Q59HF2 | |||
|association_with_transcript=-6bp_to_ENST00000222122,NM_001352,uc002pjx.3,uc002pjy.2,uc010elz.1_5end | |||
|description=CAGE_peak_6_at_DBP_5end | |||
|id=chr19:49140645..49140654,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.83e-13;3!UBERON:0006601;5.18e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p6@DBP | |||
}} |
Revision as of 21:38, 11 September 2013
Short description: | p6@DBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_DBP_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000222122, NM_001352, uc002pjx.3, uc002pjy.2, uc010elz.1_5end |
EntrezGene: | DBP |
HGNC: | 2697 |
UniProt: | Q10586Q59HF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.