FFCP PHASE1:Hg19::chr2:227659733..227659758,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3667|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6125|TSSclassifier=W|UniProt=|association_with_transcript=203bp_to_ENST00000498335_5end|description=CAGE_peak_3_at_IRS1_5end|id=chr2:227659733..227659758,-|ontology_enrichment_celltype=CL:0000055!1.81e-20!180;CL:0000057!1.25e-11!75;CL:0000680!3.01e-08!57;CL:0000056!3.01e-08!57;CL:0000355!3.01e-08!57;CL:0000187!5.86e-07!54|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000057,3.05e-11,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!2.28e-21!365;UBERON:0000481!4.57e-20!347;UBERON:0002100!7.65e-19!216;UBERON:0004119!3.10e-16!169;UBERON:0000925!3.10e-16!169;UBERON:0006595!3.10e-16!169;UBERON:0003104!1.49e-14!238;UBERON:0009142!1.49e-14!238;UBERON:0005256!6.28e-14!143;UBERON:0000914!1.08e-13!83;UBERON:0002329!1.08e-13!83;UBERON:0003077!1.08e-13!83;UBERON:0003059!1.08e-13!83;UBERON:0007282!1.08e-13!83;UBERON:0009618!1.08e-13!83;UBERON:0007285!1.08e-13!83;UBERON:0001007!2.48e-13!155;UBERON:0001555!2.48e-13!155;UBERON:0007026!2.48e-13!155;UBERON:0003102!7.04e-13!95;UBERON:0000486!2.97e-12!82;UBERON:0000468!1.15e-10!659;UBERON:0001444!7.84e-10!48;UBERON:0004290!2.25e-09!70;UBERON:0002385!1.38e-08!63;UBERON:0001015!1.38e-08!63;UBERON:0000383!1.38e-08!63;UBERON:0001134!2.33e-08!61;UBERON:0002036!2.33e-08!61;UBERON:0003082!2.33e-08!61;UBERON:0000467!7.51e-08!625;UBERON:0000119!7.52e-08!312;UBERON:0000480!1.07e-07!626;UBERON:0004921!1.17e-07!129;UBERON:0004185!1.17e-07!129;UBERON:0000077!2.01e-07!130;UBERON:0000483!2.10e-07!309;UBERON:0001048!3.53e-07!168;UBERON:0000490!4.41e-07!138;UBERON:0005911!6.93e-07!82;UBERON:0000062!9.49e-07!511|ontology_enrichment_uberon_v019=UBERON:0000075;7.58e-09;16!UBERON:0001434;2.03e-08;36!UBERON:0002204;4.96e-08;70!UBERON:0002385;5.24e-08;31!UBERON:0001015;5.24e-08;31!UBERON:0000383;5.24e-08;31!UBERON:0001134;2.78e-07;16!UBERON:0002036;2.78e-07;16!UBERON:0007196;2.81e-07;15!UBERON:0001558;2.81e-07;15!UBERON:0004765;5.33e-07;26!UBERON:0001444;9.11e-07;48|ontology_enrichment_uberon_v019_2=UBERON:0003102,8.75e-13,99;UBERON:0004119,8.40e-10,160;UBERON:0000925,8.40e-10,160;UBERON:0006595,8.40e-10,160;UBERON:0000486,1.60e-09,83;UBERON:0000033,2.64e-09,56;UBERON:0002100,3.07e-09,199;UBERON:0001444,5.36e-09,49;UBERON:0000075,5.47e-09,16;UBERON:0000153,1.34e-08,62;UBERON:0007811,1.34e-08,62;UBERON:0011137,9.00e-08,14;UBERON:0007524,1.33e-07,73;UBERON:0002329,1.96e-07,71;UBERON:0003059,1.96e-07,71;UBERON:0007282,1.96e-07,71;UBERON:0004290,1.96e-07,71;UBERON:0009618,1.96e-07,71;UBERON:0001007,2.66e-07,145;UBERON:0001555,2.66e-07,145;UBERON:0007026,2.66e-07,145;UBERON:0007196,3.02e-07,15;UBERON:0001558,3.02e-07,15;UBERON:0003077,3.58e-07,72;UBERON:0007285,3.58e-07,72;UBERON:0005256,5.99e-07,122;UBERON:0010323,7.20e-07,11;UBERON:0003104,7.50e-07,160;UBERON:0009142,7.50e-07,160;UBERON:0001134,8.32e-07,62;UBERON:0002036,8.32e-07,62;UBERON:0003082,8.32e-07,62|phase1_expression=1.63510541343501,3.63970890614671,1.12763523276777,0,1.78784437770915,0.872338524100369,0,0.631719873426831,0.783556884599516,4.91467873003018,2.09340350391728,0.436882744260345,0,5.94078494208224,3.31397375727916,0,0.602694528023977,0,0.975865597581014,2.70866327768933,0.816002764977012,3.13454721478088,2.28988789704845,2.05311637609326,1.88313959392204,0,0,0,0,0,0.154816123316076,3.67768489791571,0.6024118375565,2.9580320813343,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,3.61439152384566,3.00802746381534,4.05570253090306,7.95285947051099,3.89307896242109,14.8419662947587,9.53436409089025,3.77689578480442,0.327447688744282,1.82147644146271,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66922267785295,0,1.01304409331664,1.19168262731897,4.30254931123221,2.12801029319014,0,0,0.24666754841716,3.11211035399766,0.404132016209064,0,0.605429710579726,1.15235184896,3.98346434117454,2.18512053781224,0,3.43731965269142,0.822041490506354,2.42809416552197,1.40450806702248,14.4949461590974,4.66770405784718,5.57959218349133,7.12801714369232,3.21447008062124,2.73048408581408,2.15585442544872,6.39677233025452,3.87867411603089,8.31192346452549,6.58466431321257,4.29082914118628,2.85452311922534,0.340296549480063,1.25572744982203,2.34913127700424,2.96704661623387,2.70081986475962,4.74041634496819,1.28820270022815,2.79175284497385,1.0126579934476,2.14361411354637,1.7670364197088,4.60249493211497,1.13152239773168,2.4850671476163,1.71278566986988,4.23901480776219,0.966304265816484,4.63668405004419,1.43402297694502,0,0,0.69716365721711,0.10366105501537,0,0,1.56449532329816,0.643240938192885,1.38134921352481,8.35862270457562,5.77503585335668,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3667 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6125 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=203bp_to_ENST00000498335_5end | |||
|description=CAGE_peak_3_at_IRS1_5end | |||
|id=chr2:227659733..227659758,- | |||
|ontology_enrichment_celltype=CL:0000055!1.81e-20!180;CL:0000057!1.25e-11!75;CL:0000680!3.01e-08!57;CL:0000056!3.01e-08!57;CL:0000355!3.01e-08!57;CL:0000187!5.86e-07!54 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.05e-11,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.28e-21!365;UBERON:0000481!4.57e-20!347;UBERON:0002100!7.65e-19!216;UBERON:0004119!3.10e-16!169;UBERON:0000925!3.10e-16!169;UBERON:0006595!3.10e-16!169;UBERON:0003104!1.49e-14!238;UBERON:0009142!1.49e-14!238;UBERON:0005256!6.28e-14!143;UBERON:0000914!1.08e-13!83;UBERON:0002329!1.08e-13!83;UBERON:0003077!1.08e-13!83;UBERON:0003059!1.08e-13!83;UBERON:0007282!1.08e-13!83;UBERON:0009618!1.08e-13!83;UBERON:0007285!1.08e-13!83;UBERON:0001007!2.48e-13!155;UBERON:0001555!2.48e-13!155;UBERON:0007026!2.48e-13!155;UBERON:0003102!7.04e-13!95;UBERON:0000486!2.97e-12!82;UBERON:0000468!1.15e-10!659;UBERON:0001444!7.84e-10!48;UBERON:0004290!2.25e-09!70;UBERON:0002385!1.38e-08!63;UBERON:0001015!1.38e-08!63;UBERON:0000383!1.38e-08!63;UBERON:0001134!2.33e-08!61;UBERON:0002036!2.33e-08!61;UBERON:0003082!2.33e-08!61;UBERON:0000467!7.51e-08!625;UBERON:0000119!7.52e-08!312;UBERON:0000480!1.07e-07!626;UBERON:0004921!1.17e-07!129;UBERON:0004185!1.17e-07!129;UBERON:0000077!2.01e-07!130;UBERON:0000483!2.10e-07!309;UBERON:0001048!3.53e-07!168;UBERON:0000490!4.41e-07!138;UBERON:0005911!6.93e-07!82;UBERON:0000062!9.49e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000075;7.58e-09;16!UBERON:0001434;2.03e-08;36!UBERON:0002204;4.96e-08;70!UBERON:0002385;5.24e-08;31!UBERON:0001015;5.24e-08;31!UBERON:0000383;5.24e-08;31!UBERON:0001134;2.78e-07;16!UBERON:0002036;2.78e-07;16!UBERON:0007196;2.81e-07;15!UBERON:0001558;2.81e-07;15!UBERON:0004765;5.33e-07;26!UBERON:0001444;9.11e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,8.75e-13,99;UBERON:0004119,8.40e-10,160;UBERON:0000925,8.40e-10,160;UBERON:0006595,8.40e-10,160;UBERON:0000486,1.60e-09,83;UBERON:0000033,2.64e-09,56;UBERON:0002100,3.07e-09,199;UBERON:0001444,5.36e-09,49;UBERON:0000075,5.47e-09,16;UBERON:0000153,1.34e-08,62;UBERON:0007811,1.34e-08,62;UBERON:0011137,9.00e-08,14;UBERON:0007524,1.33e-07,73;UBERON:0002329,1.96e-07,71;UBERON:0003059,1.96e-07,71;UBERON:0007282,1.96e-07,71;UBERON:0004290,1.96e-07,71;UBERON:0009618,1.96e-07,71;UBERON:0001007,2.66e-07,145;UBERON:0001555,2.66e-07,145;UBERON:0007026,2.66e-07,145;UBERON:0007196,3.02e-07,15;UBERON:0001558,3.02e-07,15;UBERON:0003077,3.58e-07,72;UBERON:0007285,3.58e-07,72;UBERON:0005256,5.99e-07,122;UBERON:0010323,7.20e-07,11;UBERON:0003104,7.50e-07,160;UBERON:0009142,7.50e-07,160;UBERON:0001134,8.32e-07,62;UBERON:0002036,8.32e-07,62;UBERON:0003082,8.32e-07,62 | |||
|phase1_expression=1.63510541343501,3.63970890614671,1.12763523276777,0,1.78784437770915,0.872338524100369,0,0.631719873426831,0.783556884599516,4.91467873003018,2.09340350391728,0.436882744260345,0,5.94078494208224,3.31397375727916,0,0.602694528023977,0,0.975865597581014,2.70866327768933,0.816002764977012,3.13454721478088,2.28988789704845,2.05311637609326,1.88313959392204,0,0,0,0,0,0.154816123316076,3.67768489791571,0.6024118375565,2.9580320813343,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,3.61439152384566,3.00802746381534,4.05570253090306,7.95285947051099,3.89307896242109,14.8419662947587,9.53436409089025,3.77689578480442,0.327447688744282,1.82147644146271,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66922267785295,0,1.01304409331664,1.19168262731897,4.30254931123221,2.12801029319014,0,0,0.24666754841716,3.11211035399766,0.404132016209064,0,0.605429710579726,1.15235184896,3.98346434117454,2.18512053781224,0,3.43731965269142,0.822041490506354,2.42809416552197,1.40450806702248,14.4949461590974,4.66770405784718,5.57959218349133,7.12801714369232,3.21447008062124,2.73048408581408,2.15585442544872,6.39677233025452,3.87867411603089,8.31192346452549,6.58466431321257,4.29082914118628,2.85452311922534,0.340296549480063,1.25572744982203,2.34913127700424,2.96704661623387,2.70081986475962,4.74041634496819,1.28820270022815,2.79175284497385,1.0126579934476,2.14361411354637,1.7670364197088,4.60249493211497,1.13152239773168,2.4850671476163,1.71278566986988,4.23901480776219,0.966304265816484,4.63668405004419,1.43402297694502,0,0,0.69716365721711,0.10366105501537,0,0,1.56449532329816,0.643240938192885,1.38134921352481,8.35862270457562,5.77503585335668,0,0,0.241011029883482,0.110293972732394,0.435758888184812,0,0.269662616320329,0.196221465125346,0,0,0,0.4115740113314,1.47008711385542,7.60530208930985,0.982827216677626,2.36315962672562,0,0.614942192715568,7.03428022223955,1.53650399572076,0,0.100528972411631,16.7585085736939,5.2129328849652,2.07986957055916,0,7.9991979432803,0.469634776943287,0,0,0,23.7061319387783,30.9055018354154,0,0,0,1.87467667973554,6.71928512795438,4.67857820899875,7.07512329352502,13.3691611716422,2.30029607499127,0,0,0,0,0,0.380987365753014,0,0,0,0.308482478109971,0,0,1.68196626518041,1.30788020649984,3.00686971865895,0.387815147273333,3.57656445851882,0.845302752556,14.360658295583,4.16029747645464,5.40135485950498,5.67396528093113,2.66422179016099,12.2961074546007,4.88359444852299,2.46972101034231,0.325736184293735,10.3063665135338,1.58390374586686,0,0,0,0,0,0,0,0,4.27910715122155,11.2929419200712,5.54786070886035,6.62525563987614,0,0,0,0,0.508189248444927,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,5.39842563564216,1.00034104211935,1.62759014219841,1.03985430765404,2.14114786556594,0.788512075169673,0.937131319941706,0.902838299183157,0,4.1389228517002,5.97803038681893,2.94990669666725,5.12613325361689,0.391602314925481,0.343143423810856,0,0,0,0,1.66435439510497,0.604780586659361,0.744323423456331,0.153461973288062,1.12264037773229,0.128139149255701,0,0.160853921143607,0,2.15893571323718,3.9063579568888,9.93738587767091,3.11552657510173,6.39157081529776,0.241718899183244,4.81215528727884,2.4861867012692,1.49258782613989,2.00300284807389,1.44236856455367,0.902399225814824,0.462092022626489,3.13739907670742,1.46139224653261,1.05551628892876,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0.223874754722178,0,0,4.61610225209501,0.656029291399411,4.22991913063594,10.5101831880677,11.4461831022929,17.822051982847,0,0,0,2.90012154876366,2.7728751080636,2.14905144616581,3.1702411671442,2.79292636657511,3.0453505721988,2.30111894023472,2.31483292681517,3.96683796866347,1.53752053892085,6.50824833722379,0.30347334256665,3.71876439437829,3.46293581513704,2.0911118104818,0.924100740528266,1.06461206063404,5.21959795245044,0.37064843820784,0.572499546967965,1.116475108079,1.2655176988749,0.38126038784765,7.42103594802868,4.2793898803392,0.95460974377781,0,9.713112709499,6.31435168392926,6.59749453135844,0.404364963146632,1.58510321173008,0,2.92580243453754,1.46228093778771,0,4.7774968992795,1.97967604735198,1.13008116620243,0.551365343546124,0.66343897524122,0.438450885253763,4.05142873986681,3.9353685122798,0,0.6196469961995,0.845086807596724,4.7325746227337,1.76848273823618,0,7.09522128141196,2.11107635297664,0.987884678879706,1.89736586882858,2.44954304171488,3.65644028356946,2.01090682660736,1.08890984861323,11.2972560932135,5.59656984472599,5.05414427002877,4.87773168890343,2.98640420269047,0,0,0,0,0,0,0,0,1.06824071127473,2.88743956579008,0,0,0.144269212976445,2.91681557728498,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55722532125772,0.23874448473769,0.296964680832639,0,0,0.140669416410513,1.78093928036649,0,0,0.398495976502139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| |||
|short_description=p3@IRS1 | |||
}} |
Revision as of 17:11, 12 September 2013
Short description: | p3@IRS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_IRS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 203bp_to_ENST00000498335_5end |
EntrezGene: | IRS1 |
HGNC: | 6125 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.05e-11 | 76 |
Ontology term | p-value | n |
---|---|---|
surface structure | 8.75e-13 | 99 |
endoderm-derived structure | 8.40e-10 | 160 |
endoderm | 8.40e-10 | 160 |
presumptive endoderm | 8.40e-10 | 160 |
multilaminar epithelium | 1.60e-09 | 83 |
head | 2.64e-09 | 56 |
trunk | 3.07e-09 | 199 |
subdivision of head | 5.36e-09 | 49 |
subdivision of skeletal system | 5.47e-09 | 16 |
anterior region of body | 1.34e-08 | 62 |
craniocervical region | 1.34e-08 | 62 |
axial skeletal system | 9.00e-08 | 14 |
dense mesenchyme tissue | 1.33e-07 | 73 |
somite | 1.96e-07 | 71 |
presomitic mesoderm | 1.96e-07 | 71 |
presumptive segmental plate | 1.96e-07 | 71 |
dermomyotome | 1.96e-07 | 71 |
trunk paraxial mesoderm | 1.96e-07 | 71 |
digestive system | 2.66e-07 | 145 |
digestive tract | 2.66e-07 | 145 |
primitive gut | 2.66e-07 | 145 |
tracheobronchial tree | 3.02e-07 | 15 |
lower respiratory tract | 3.02e-07 | 15 |
paraxial mesoderm | 3.58e-07 | 72 |
presumptive paraxial mesoderm | 3.58e-07 | 72 |
trunk mesenchyme | 5.99e-07 | 122 |
cranial skeletal system | 7.20e-07 | 11 |
mesenchyme | 7.50e-07 | 160 |
entire embryonic mesenchyme | 7.50e-07 | 160 |
skeletal muscle tissue | 8.32e-07 | 62 |
striated muscle tissue | 8.32e-07 | 62 |
myotome | 8.32e-07 | 62 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.