FFCP PHASE1:Hg19::chr3:17784063..17784155,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9779|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19166|TSSclassifier=S|UniProt=F2Z3I5,C9K0P2,C9JDR8,C9JWX0,C9JW04,C9JIU4,C9J397,C9JED7|association_with_transcript=0bp_to_ENST00000412981,ENST00000414349,ENST00000415814,ENST00000423331,ENST00000425944,ENST00000428355,ENST00000430169,ENST00000443499,ENST00000444471,ENST00000444756,ENST00000445294,ENST00000446863,ENST00000452492,ENST00000481396_5end|description=CAGE_peak_1_at_TBC1D5_5end|id=chr3:17784063..17784155,-|ontology_enrichment_celltype=CL:0000542!3.64e-09!53;CL:0000051!3.64e-09!53;CL:0000838!7.68e-09!52;CL:0000945!1.37e-08!24;CL:0000826!1.37e-08!24|ontology_enrichment_celltype_v019=CL:0000945;1.28e-08;24!CL:0000236;6.76e-08;13|ontology_enrichment_celltype_v019_2=CL:0000542,3.64e-09,53;CL:0000051,3.64e-09,53;CL:0000838,7.68e-09,52;CL:0000945,1.37e-08,24;CL:0000826,1.37e-08,24;CL:0000037,8.30e-07,168|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.93e-27!115;UBERON:0001049!6.00e-15!57;UBERON:0005068!6.00e-15!57;UBERON:0006241!6.00e-15!57;UBERON:0007135!6.00e-15!57;UBERON:0000955!5.11e-13!69;UBERON:0006238!5.11e-13!69;UBERON:0002616!3.92e-12!59;UBERON:0003080!6.30e-12!42;UBERON:0000073!1.32e-11!94;UBERON:0001016!1.32e-11!94;UBERON:0002780!1.51e-11!41;UBERON:0001890!1.51e-11!41;UBERON:0006240!1.51e-11!41;UBERON:0001017!1.33e-10!82;UBERON:0005743!2.52e-10!86;UBERON:0003075!4.33e-10!86;UBERON:0007284!4.33e-10!86;UBERON:0001893!7.79e-10!34;UBERON:0002020!1.03e-09!34;UBERON:0003528!1.03e-09!34;UBERON:0002346!2.09e-09!90;UBERON:0002791!2.35e-09!33;UBERON:0001869!9.55e-09!32;UBERON:0000153!2.30e-07!129;UBERON:0007811!2.30e-07!129;UBERON:0002619!4.60e-07!22;UBERON:0000956!4.73e-07!25;UBERON:0000203!4.73e-07!25;UBERON:0000033!8.60e-07!123|ontology_enrichment_uberon_v019=UBERON:0002780;1.27e-08;41!UBERON:0001890;1.27e-08;41!UBERON:0000073;2.36e-08;53!UBERON:0002616;2.36e-08;53!UBERON:0001893;3.12e-08;34!UBERON:0003528;4.59e-08;34!UBERON:0002020;4.59e-08;34!UBERON:0007023;5.52e-08;114!UBERON:0002791;7.95e-08;32!UBERON:0001869;1.00e-07;32!UBERON:0002619;4.58e-07;22!UBERON:0000956;5.01e-07;25!UBERON:0000203;5.01e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.12e-26,114;UBERON:0001049,1.46e-14,56;UBERON:0005068,1.46e-14,56;UBERON:0006241,1.46e-14,56;UBERON:0007135,1.46e-14,56;UBERON:0000073,3.24e-13,53;UBERON:0002616,3.24e-13,53;UBERON:0000955,1.16e-12,68;UBERON:0006238,1.16e-12,68;UBERON:0001016,1.45e-11,89;UBERON:0002780,1.51e-11,41;UBERON:0001890,1.51e-11,41;UBERON:0003080,1.51e-11,41;UBERON:0006240,1.51e-11,41;UBERON:0001017,2.77e-10,81;UBERON:0001893,7.79e-10,34;UBERON:0003528,1.03e-09,34;UBERON:0002020,1.03e-09,34;UBERON:0003075,5.03e-09,82;UBERON:0007284,5.03e-09,82;UBERON:0002791,7.97e-09,32;UBERON:0001869,9.55e-09,32;UBERON:0002346,2.21e-08,86;UBERON:0002619,4.60e-07,22;UBERON:0000956,4.73e-07,25;UBERON:0000203,4.73e-07,25|phase1_expression=23.6181893051724,16.0575392918237,30.4461512847298,18.0131937035635,26.8176656656373,13.9574163856059,5.06599756336621,8.2123583545488,19.3277364867881,7.37201809504527,6.97801167972428,14.1986891884612,11.8695140202804,29.7039247104112,38.4420955844382,11.4295274896802,15.6700577286234,7.30310090387373,16.1017823600867,19.0837640019021,18.1560615207385,13.7920077450359,29.7685426616299,28.7436292653057,25.7362411169346,41.1104122923978,36.6168628946758,40.9296062831132,26.7487708257255,37.6152810135268,26.7831893336811,10.1136334692682,8.73497164456925,16.6389304575054,53.5298356009884,34.404954261956,43.4528650215574,48.1976005422733,35.4963672022151,40.3640219531484,71.6529517567758,56.3574978873024,74.4393390462799,16.2846027433112,11.7141542543531,11.6440349370152,10.4593066607558,11.1015329765893,11.1494293522237,14.6723120084297,12.808035326455,13.7159693335379,17.2372840368309,18.0735711403471,5.41705946377367,13.7416907866101,11.4620583024295,8.98893937780339,17.4467818651414,12.5162320559677,8.95071976118658,15.5030111087757,12.7656740877844,11.5080682643827,16.5419266018293,14.7520158419696,7.4738669879469,14.5724225848911,13.037072960505,12.1625753034865,17.5565855763677,13.9945501675275,10.7597211729901,23.0268262080017,19.346991296819,20.1272299688041,33.9232466062415,30.0353785683013,38.5741408072992,30.2113508365723,25.8591680358817,29.4089287561061,43.9990611153307,58.9829700163102,68.4922125474937,53.7680080433799,53.6530622628257,66.0965305947656,64.7823975329165,52.472956499445,77.412963798885,52.2641098540136,60.7814432719114,38.3296852879175,34.7515309048552,27.9187129861582,40.9156321836773,28.689785680689,32.690638340922,32.7685530965729,25.4219367974201,23.6723902867367,13.6378709885538,30.9721070140783,18.5601721709147,21.045719985444,28.4344056953266,34.2003823667553,33.5553116704486,23.0213066445147,17.6864011382943,23.4740499445393,18.9806800847437,21.6708070752668,15.6803285707465,29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865005,10.6727764772054,11.9428766609585,16.8011661158525,21.633929426516,17.1742239270619,27.7606776103032,25.2331977833567,51.4659819299822,17.7476118536344,17.6830621899572,21.0685451634689,15.173675679401,19.6997725189636,4.32322026025361,24.9983816519726,21.0260083675598,13.3110686406931,14.5290498961642,30.4927407119657,13.4717833275167,7.90035886061194,60.2806781621546,17.1477071778662,26.0415087014192,19.954978099213,42.2616705011872,19.4160597915438,21.1312123358627,17.198916043524,49.6116543077755,31.5153412779293,41.428664610379,21.5403961794654,24.3390343431833,22.394781361187,53.7156359475337,44.1003478612429,17.2992536041486,40.7351950456212,29.0242626221383,14.4550945669144,17.3510069962603,11.1728983594649,24.1683306496598,59.3828939859438,16.8119857139949,13.401685860246,19.5997105506048,53.8240906308331,24.0884179753494,66.0884176496606,46.7665310468921,28.4841016730541,39.0046903898189,41.176289636122,61.3908507114364,29.3461678318067,26.3072483065461,9.17142992608395,14.5562339349426,25.5526003963002,31.7565565987646,18.6981248789298,44.2236730693633,24.0029031757189,31.2605604493237,39.8098175611762,22.2729807813732,26.9098076915022,54.3677556178077,32.0242020431677,54.7720010728138,57.5181398458735,30.6305893050203,23.0268262080017,39.6968942711435,22.6873905223911,12.009668198122,28.9278991374275,60.1947862771695,25.4925553779385,66.2496976832276,35.8357575457061,12.6757386311357,76.9981162374009,55.2593929101642,46.8302147767485,27.7755526077325,38.3748336527639,39.403532610958,38.1790883495885,15.4149689822584,71.2263801997407,13.1715830643359,11.9437921971763,45.0302228312935,43.6117568382325,15.808833850065,17.9074020471657,31.2667432244799,26.3164528487057,26.8028009037501,29.7241654580059,30.97636983506,50.4094323112208,56.5817007600807,42.3387050190929,25.8890761454777,10.2368107269226,12.4220062067066,12.0803866341616,18.3540936860504,18.0438528973759,14.8908632553216,16.4260490969995,26.6757319207786,65.5709840629838,22.2242490289,20.8898313919437,24.259698518624,25.6387606228439,23.307389550031,30.6454572440347,31.1011857175017,23.6044325344274,9.40634592723046,42.4106596634256,7.77732605435366,50.254967581426,77.8261568856965,40.152294120423,22.4303791387918,56.5783186238719,48.6657054200508,30.0822879334036,33.0324786420467,13.762899996912,24.794582306953,18.2584097061629,38.991989089386,69.6630374116053,13.0950396620343,33.1798472131664,26.1810414204226,42.322147241232,16.7397758175038,14.327444487574,9.51778436672336,18.5464644507566,17.7010226581187,17.4843931395783,6.83325159271278,19.7740879896515,20.3087727972007,29.3327820972079,35.6159881625725,39.1227630028021,27.3625915021397,61.6460655336896,34.9703730317609,48.565144018603,21.378929155718,35.0722135771597,20.9686583025747,37.80641201723,49.9229456726802,24.1665590165627,19.1650648607757,45.5299878378612,31.1274371404215,36.5926392200615,22.385898868018,54.3242190517572,63.7138531546902,13.6534307202012,11.7320471201727,47.9186461196837,58.9999458557821,65.2441638701802,47.5006152874822,23.0809314458328|short_description=p1@TBC1D5}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9779 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19166 | |||
|TSSclassifier=S | |||
|UniProt=F2Z3I5,C9K0P2,C9JDR8,C9JWX0,C9JW04,C9JIU4,C9J397,C9JED7 | |||
|association_with_transcript=0bp_to_ENST00000412981,ENST00000414349,ENST00000415814,ENST00000423331,ENST00000425944,ENST00000428355,ENST00000430169,ENST00000443499,ENST00000444471,ENST00000444756,ENST00000445294,ENST00000446863,ENST00000452492,ENST00000481396_5end | |||
|description=CAGE_peak_1_at_TBC1D5_5end | |||
|id=chr3:17784063..17784155,- | |||
|ontology_enrichment_celltype=CL:0000542!3.64e-09!53;CL:0000051!3.64e-09!53;CL:0000838!7.68e-09!52;CL:0000945!1.37e-08!24;CL:0000826!1.37e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.28e-08;24!CL:0000236;6.76e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.64e-09,53;CL:0000051,3.64e-09,53;CL:0000838,7.68e-09,52;CL:0000945,1.37e-08,24;CL:0000826,1.37e-08,24;CL:0000037,8.30e-07,168 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;1.27e-08;41!UBERON:0001890;1.27e-08;41!UBERON:0000073;2.36e-08;53!UBERON:0002616;2.36e-08;53!UBERON:0001893;3.12e-08;34!UBERON:0003528;4.59e-08;34!UBERON:0002020;4.59e-08;34!UBERON:0007023;5.52e-08;114!UBERON:0002791;7.95e-08;32!UBERON:0001869;1.00e-07;32!UBERON:0002619;4.58e-07;22!UBERON:0000956;5.01e-07;25!UBERON:0000203;5.01e-07;25 | |||
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| |||
|short_description=p1@TBC1D5 | |||
}} |
Revision as of 22:49, 12 September 2013
Short description: | p1@TBC1D5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TBC1D5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000412981, ENST00000414349, ENST00000415814, ENST00000423331, ENST00000425944, ENST00000428355, ENST00000430169, ENST00000443499, ENST00000444471, ENST00000444756, ENST00000445294, ENST00000446863, ENST00000452492, ENST00000481396_5end |
EntrezGene: | TBC1D5 |
HGNC: | 19166 |
UniProt: | F2Z3I5C9K0P2C9JDR8C9JWX0C9JW04C9JIU4C9J397C9JED7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.64e-09 | 53 |
common lymphoid progenitor | 3.64e-09 | 53 |
lymphoid lineage restricted progenitor cell | 7.68e-09 | 52 |
lymphocyte of B lineage | 1.37e-08 | 24 |
pro-B cell | 1.37e-08 | 24 |
hematopoietic stem cell | 8.30e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.12e-26 | 114 |
neural tube | 1.46e-14 | 56 |
neural rod | 1.46e-14 | 56 |
future spinal cord | 1.46e-14 | 56 |
neural keel | 1.46e-14 | 56 |
regional part of nervous system | 3.24e-13 | 53 |
regional part of brain | 3.24e-13 | 53 |
brain | 1.16e-12 | 68 |
future brain | 1.16e-12 | 68 |
nervous system | 1.45e-11 | 89 |
regional part of forebrain | 1.51e-11 | 41 |
forebrain | 1.51e-11 | 41 |
anterior neural tube | 1.51e-11 | 41 |
future forebrain | 1.51e-11 | 41 |
central nervous system | 2.77e-10 | 81 |
telencephalon | 7.79e-10 | 34 |
brain grey matter | 1.03e-09 | 34 |
gray matter | 1.03e-09 | 34 |
neural plate | 5.03e-09 | 82 |
presumptive neural plate | 5.03e-09 | 82 |
regional part of telencephalon | 7.97e-09 | 32 |
cerebral hemisphere | 9.55e-09 | 32 |
neurectoderm | 2.21e-08 | 86 |
regional part of cerebral cortex | 4.60e-07 | 22 |
cerebral cortex | 4.73e-07 | 25 |
pallium | 4.73e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.