FFCP PHASE1:Hg19::chr3:52514172..52514193,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11188|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18006|TSSclassifier=S|UniProt=|association_with_transcript=17bp_to_ENST00000485765_5end|coexpression_cluster_id=C67|description=CAGE_peak_4_at_NISCH_5end|id=chr3:52514172..52514193,+|ontology_enrichment_celltype=CL:0002194!6.19e-27!63;CL:0000576!6.19e-27!63;CL:0000040!6.19e-27!63;CL:0000559!6.19e-27!63;CL:0002009!7.99e-26!65;CL:0000766!4.35e-24!76;CL:0000839!2.52e-23!70;CL:0000557!7.21e-23!71;CL:0002057!2.04e-19!42;CL:0000860!1.07e-17!45;CL:0000763!2.63e-13!112;CL:0000049!2.63e-13!112;CL:0002087!9.32e-13!119;CL:0000738!3.62e-11!140;CL:0002031!2.09e-09!124;CL:0002393!1.13e-08!9;CL:0002397!1.13e-08!9;CL:0002619!1.86e-08!3;CL:0000037!4.89e-08!172;CL:0000566!4.89e-08!172;CL:0000988!4.14e-07!182|ontology_enrichment_celltype_v019=CL:0002619;1.20e-22;3!CL:0000235;8.62e-19;6!CL:0000576;8.81e-13;48!CL:0000766;4.92e-11;69!CL:0002393;5.83e-11;6!CL:0002397;5.83e-11;6!CL:0000473;1.31e-10;39!CL:0000234;1.31e-10;39!CL:0000763;3.51e-08;100|ontology_enrichment_celltype_v019_2=CL:0002194,3.55e-23,59;CL:0000576,3.55e-23,59;CL:0000040,3.55e-23,59;CL:0000559,3.55e-23,59;CL:0002619,1.20e-22,3;CL:0002009,2.47e-22,61;CL:0000766,3.42e-21,72;CL:0000839,1.89e-20,66;CL:0000557,4.16e-20,67;CL:0000235,1.09e-18,6;CL:0000473,2.00e-18,48;CL:0000234,2.00e-18,48;CL:0000763,3.67e-13,108;CL:0000049,3.67e-13,108;CL:0002087,1.39e-10,115;CL:0002031,5.01e-10,120;CL:0000738,7.76e-10,136;CL:0000860,2.20e-09,42;CL:0002057,2.20e-09,42;CL:0002032,7.63e-08,161;CL:0000837,7.63e-08,161;CL:0002393,1.60e-07,9;CL:0002397,1.60e-07,9;CL:0000037,2.16e-07,168;CL:0000988,7.25e-07,177|ontology_enrichment_development_v019=UBERON:0010226;1.41e-08;1!UBERON:0000358;1.88e-08;1!UBERON:0010115;4.10e-08;1!CL:0000049;1.41e-07;108!CL:0002057;3.15e-07;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.36e-25!115;UBERON:0002390!4.22e-23!102;UBERON:0003061!4.22e-23!102;UBERON:0002193!6.69e-23!112;UBERON:0002371!9.27e-21!80;UBERON:0001474!1.16e-18!86;UBERON:0002405!2.96e-18!115;UBERON:0004765!1.54e-14!101;UBERON:0001434!1.54e-14!101;UBERON:0003081!2.21e-10!216;UBERON:0000062!2.13e-08!511;UBERON:0002204!6.11e-08!167;UBERON:0000926!3.85e-07!448;UBERON:0004120!3.85e-07!448;UBERON:0006603!3.85e-07!448|ontology_enrichment_uberon_v019=UBERON:0000029;1.22e-08;1!UBERON:0002084;1.41e-08;1!UBERON:0002082;1.41e-08;1!UBERON:0002363;4.10e-08;1!UBERON:0002372;4.10e-08;1!UBERON:0001389;4.10e-08;1!UBERON:0000026;4.10e-08;1!UBERON:0008784;4.10e-08;1!UBERON:0006058;4.10e-08;1!UBERON:0003663;4.10e-08;1!UBERON:0004256;4.10e-08;1!UBERON:0001961;4.10e-08;1!UBERON:0001744;4.10e-08;1!UBERON:0004708;4.10e-08;1!UBERON:0002101;4.10e-08;1!UBERON:0004709;4.10e-08;1!UBERON:0002529;4.10e-08;1!UBERON:0010538;4.10e-08;1!UBERON:0003661;4.10e-08;1!UBERON:0010890;4.10e-08;1!UBERON:0002471;4.10e-08;1!UBERON:0001383;4.10e-08;1!UBERON:0010758;4.10e-08;1!UBERON:0010707;4.10e-08;1!UBERON:0000978;4.10e-08;1!UBERON:0002103;4.10e-08;1!UBERON:0001665;4.10e-08;1!UBERON:0003823;4.10e-08;1!UBERON:0001042;4.10e-08;1!UBERON:0000154;4.10e-08;1!UBERON:0010709;4.10e-08;1!UBERON:0001735;4.10e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0002405,4.70e-18,93;UBERON:0002371,2.04e-17,76;UBERON:0001474,6.03e-16,82;UBERON:0002193,4.13e-15,108;UBERON:0004765,2.74e-14,90;UBERON:0002390,6.74e-13,98;UBERON:0003061,6.74e-13,98;UBERON:0001434,1.38e-12,100;UBERON:0000029,1.22e-08,1;UBERON:0002084,1.41e-08,1;UBERON:0002082,1.41e-08,1;UBERON:0010226,1.41e-08,1;UBERON:0005418,2.33e-08,1;UBERON:0001389,2.33e-08,1;UBERON:0000026,2.33e-08,1;UBERON:0008784,2.33e-08,1;UBERON:0006058,2.33e-08,1;UBERON:0003663,2.33e-08,1;UBERON:0004256,2.33e-08,1;UBERON:0004708,2.33e-08,1;UBERON:0002101,2.33e-08,1;UBERON:0004709,2.33e-08,1;UBERON:0002529,2.33e-08,1;UBERON:0010538,2.33e-08,1;UBERON:0003661,2.33e-08,1;UBERON:0010890,2.33e-08,1;UBERON:0002471,2.33e-08,1;UBERON:0001383,2.33e-08,1;UBERON:0004357,2.33e-08,1;UBERON:0004347,2.33e-08,1;UBERON:0005420,2.33e-08,1;UBERON:0005732,2.33e-08,1;UBERON:0010758,2.33e-08,1;UBERON:0010707,2.33e-08,1;UBERON:0000978,2.33e-08,1;UBERON:0002103,2.33e-08,1;UBERON:0001665,2.33e-08,1;UBERON:0003823,2.33e-08,1;UBERON:0000154,2.33e-08,1;UBERON:0010709,2.33e-08,1;UBERON:0005733,2.33e-08,1;UBERON:0005730,2.33e-08,1;UBERON:0002363,2.69e-08,1;UBERON:0007645,2.69e-08,1;UBERON:0007647,2.69e-08,1;UBERON:0010115,2.69e-08,1;UBERON:0002372,5.43e-08,1;UBERON:0001961,5.43e-08,1;UBERON:0001744,5.43e-08,1;UBERON:0001735,5.43e-08,1;UBERON:0003081,1.45e-07,203;UBERON:0002204,1.73e-07,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0,0.619264493264304,0,0,0,0,0,0.587200878669695,0.553995408531877,0.401088894940283,0.651032612147555,35.378644929908,10.0407036465884,18.5454408696614,1.74477886535478,2.26725566213286,1.94067248950253,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11188 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18006 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=17bp_to_ENST00000485765_5end | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_4_at_NISCH_5end | |||
|id=chr3:52514172..52514193,+ | |||
|ontology_enrichment_celltype=CL:0002194!6.19e-27!63;CL:0000576!6.19e-27!63;CL:0000040!6.19e-27!63;CL:0000559!6.19e-27!63;CL:0002009!7.99e-26!65;CL:0000766!4.35e-24!76;CL:0000839!2.52e-23!70;CL:0000557!7.21e-23!71;CL:0002057!2.04e-19!42;CL:0000860!1.07e-17!45;CL:0000763!2.63e-13!112;CL:0000049!2.63e-13!112;CL:0002087!9.32e-13!119;CL:0000738!3.62e-11!140;CL:0002031!2.09e-09!124;CL:0002393!1.13e-08!9;CL:0002397!1.13e-08!9;CL:0002619!1.86e-08!3;CL:0000037!4.89e-08!172;CL:0000566!4.89e-08!172;CL:0000988!4.14e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0002619;1.20e-22;3!CL:0000235;8.62e-19;6!CL:0000576;8.81e-13;48!CL:0000766;4.92e-11;69!CL:0002393;5.83e-11;6!CL:0002397;5.83e-11;6!CL:0000473;1.31e-10;39!CL:0000234;1.31e-10;39!CL:0000763;3.51e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.55e-23,59;CL:0000576,3.55e-23,59;CL:0000040,3.55e-23,59;CL:0000559,3.55e-23,59;CL:0002619,1.20e-22,3;CL:0002009,2.47e-22,61;CL:0000766,3.42e-21,72;CL:0000839,1.89e-20,66;CL:0000557,4.16e-20,67;CL:0000235,1.09e-18,6;CL:0000473,2.00e-18,48;CL:0000234,2.00e-18,48;CL:0000763,3.67e-13,108;CL:0000049,3.67e-13,108;CL:0002087,1.39e-10,115;CL:0002031,5.01e-10,120;CL:0000738,7.76e-10,136;CL:0000860,2.20e-09,42;CL:0002057,2.20e-09,42;CL:0002032,7.63e-08,161;CL:0000837,7.63e-08,161;CL:0002393,1.60e-07,9;CL:0002397,1.60e-07,9;CL:0000037,2.16e-07,168;CL:0000988,7.25e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.41e-08;1!UBERON:0000358;1.88e-08;1!UBERON:0010115;4.10e-08;1!CL:0000049;1.41e-07;108!CL:0002057;3.15e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.36e-25!115;UBERON:0002390!4.22e-23!102;UBERON:0003061!4.22e-23!102;UBERON:0002193!6.69e-23!112;UBERON:0002371!9.27e-21!80;UBERON:0001474!1.16e-18!86;UBERON:0002405!2.96e-18!115;UBERON:0004765!1.54e-14!101;UBERON:0001434!1.54e-14!101;UBERON:0003081!2.21e-10!216;UBERON:0000062!2.13e-08!511;UBERON:0002204!6.11e-08!167;UBERON:0000926!3.85e-07!448;UBERON:0004120!3.85e-07!448;UBERON:0006603!3.85e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.22e-08;1!UBERON:0002084;1.41e-08;1!UBERON:0002082;1.41e-08;1!UBERON:0002363;4.10e-08;1!UBERON:0002372;4.10e-08;1!UBERON:0001389;4.10e-08;1!UBERON:0000026;4.10e-08;1!UBERON:0008784;4.10e-08;1!UBERON:0006058;4.10e-08;1!UBERON:0003663;4.10e-08;1!UBERON:0004256;4.10e-08;1!UBERON:0001961;4.10e-08;1!UBERON:0001744;4.10e-08;1!UBERON:0004708;4.10e-08;1!UBERON:0002101;4.10e-08;1!UBERON:0004709;4.10e-08;1!UBERON:0002529;4.10e-08;1!UBERON:0010538;4.10e-08;1!UBERON:0003661;4.10e-08;1!UBERON:0010890;4.10e-08;1!UBERON:0002471;4.10e-08;1!UBERON:0001383;4.10e-08;1!UBERON:0010758;4.10e-08;1!UBERON:0010707;4.10e-08;1!UBERON:0000978;4.10e-08;1!UBERON:0002103;4.10e-08;1!UBERON:0001665;4.10e-08;1!UBERON:0003823;4.10e-08;1!UBERON:0001042;4.10e-08;1!UBERON:0000154;4.10e-08;1!UBERON:0010709;4.10e-08;1!UBERON:0001735;4.10e-08;1 | |||
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|short_description=p4@NISCH | |||
}} |
Revision as of 00:49, 13 September 2013
Short description: | p4@NISCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_NISCH_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 17bp_to_ENST00000485765_5end |
EntrezGene: | NISCH |
HGNC: | 18006 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.55e-23 | 59 |
monocyte | 3.55e-23 | 59 |
monoblast | 3.55e-23 | 59 |
promonocyte | 3.55e-23 | 59 |
adult endothelial progenitor cell | 1.20e-22 | 3 |
macrophage dendritic cell progenitor | 2.47e-22 | 61 |
myeloid leukocyte | 3.42e-21 | 72 |
myeloid lineage restricted progenitor cell | 1.89e-20 | 66 |
granulocyte monocyte progenitor cell | 4.16e-20 | 67 |
macrophage | 1.09e-18 | 6 |
defensive cell | 2.00e-18 | 48 |
phagocyte | 2.00e-18 | 48 |
myeloid cell | 3.67e-13 | 108 |
common myeloid progenitor | 3.67e-13 | 108 |
nongranular leukocyte | 1.39e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 5.01e-10 | 120 |
leukocyte | 7.76e-10 | 136 |
classical monocyte | 2.20e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.20e-09 | 42 |
hematopoietic oligopotent progenitor cell | 7.63e-08 | 161 |
hematopoietic multipotent progenitor cell | 7.63e-08 | 161 |
intermediate monocyte | 1.60e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.60e-07 | 9 |
hematopoietic stem cell | 2.16e-07 | 168 |
hematopoietic cell | 7.25e-07 | 177 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.