FFCP PHASE1:Hg19::chr4:6324609..6324619,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5522|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=9306|TSSclassifier=W|UniProt=|association_with_transcript=-138bp_to_BC045682_5end|coexpression_cluster_id=C42|description=CAGE_peak_24_at_PPP2R2C_5end|id=chr4:6324609..6324619,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;5.74e-23;12|ontology_enrichment_celltype_v019_2=CL:0000182,5.74e-23,12|ontology_enrichment_development_v019=UBERON:0004161;6.20e-25;11!UBERON:0009497;2.66e-21;13!UBERON:0001041;8.88e-21;30!UBERON:0003104;2.91e-09;31|ontology_enrichment_disease=DOID:178!2.89e-08!1;DOID:326!2.89e-08!1;DOID:3978!2.89e-08!1;DOID:3394!2.89e-08!1;DOID:5844!2.89e-08!1|ontology_enrichment_disease_v019=DOID:5409;7.35e-18;4!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9!DOID:7;1.03e-07;39|ontology_enrichment_disease_v019_2=DOID:5409,7.35e-18,4;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9;DOID:7,7.07e-08,39|ontology_enrichment_uberon=UBERON:0001893!1.16e-35!34;UBERON:0002619!2.87e-34!22;UBERON:0001869!1.16e-32!32;UBERON:0002791!1.10e-31!33;UBERON:0001950!4.75e-31!20;UBERON:0001049!1.05e-30!57;UBERON:0005068!1.05e-30!57;UBERON:0006241!1.05e-30!57;UBERON:0007135!1.05e-30!57;UBERON:0002020!1.06e-30!34;UBERON:0003528!1.06e-30!34;UBERON:0000956!4.27e-30!25;UBERON:0000203!4.27e-30!25;UBERON:0002616!1.42e-29!59;UBERON:0002780!2.80e-29!41;UBERON:0001890!2.80e-29!41;UBERON:0006240!2.80e-29!41;UBERON:0003080!1.55e-28!42;UBERON:0000955!1.29e-27!69;UBERON:0006238!1.29e-27!69;UBERON:0001017!1.16e-25!82;UBERON:0005743!2.49e-24!86;UBERON:0003075!5.86e-22!86;UBERON:0007284!5.86e-22!86;UBERON:0000073!9.83e-22!94;UBERON:0001016!9.83e-22!94;UBERON:0002346!7.70e-21!90;UBERON:0003056!5.60e-19!61;UBERON:0000200!2.48e-18!6;UBERON:0007023!1.05e-17!115;UBERON:0000033!3.52e-14!123;UBERON:0001871!3.95e-14!7;UBERON:0004121!1.41e-13!169;UBERON:0002021!2.17e-13!5;UBERON:0000153!2.27e-13!129;UBERON:0007811!2.27e-13!129;UBERON:0000924!3.54e-13!173;UBERON:0006601!3.54e-13!173;UBERON:0000025!1.22e-11!194;UBERON:0002771!3.12e-10!3;UBERON:0004111!1.37e-08!241;UBERON:0002336!3.83e-08!1;UBERON:0001018!3.83e-08!1;UBERON:0002473!3.83e-08!1;UBERON:0005340!3.83e-08!1;UBERON:0002316!3.83e-08!1;UBERON:0003544!3.83e-08!1;UBERON:0001020!3.83e-08!1;UBERON:0005970!3.83e-08!1;UBERON:0002437!3.83e-08!1;UBERON:0002022!4.72e-08!1;UBERON:0007190!5.43e-08!1;UBERON:0002581!5.82e-08!1;UBERON:0000483!1.59e-07!309;UBERON:0000119!2.06e-07!312|ontology_enrichment_uberon_v019=UBERON:0002107;5.66e-15;19!UBERON:0006925;5.66e-15;19!UBERON:0002423;1.15e-11;25!UBERON:0002365;6.52e-10;31!UBERON:0002330;6.52e-10;31!UBERON:0002368;5.80e-08;33!UBERON:0000949;2.59e-07;43|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.66e-15,19;UBERON:0006925,5.66e-15,19;UBERON:0008836,5.66e-15,19;UBERON:0008835,4.26e-13,22;UBERON:0003894,4.26e-13,22;UBERON:0009854,1.41e-12,23;UBERON:0007499,1.15e-11,25;UBERON:0009497,1.15e-11,25;UBERON:0000015,1.15e-11,25;UBERON:0002423,1.15e-11,25;UBERON:0006235,1.15e-11,25;UBERON:0004161,1.15e-11,25;UBERON:0009856,2.91e-11,26;UBERON:0002365,1.25e-09,31;UBERON:0002330,1.25e-09,31;UBERON:0002368,1.18e-08,35;UBERON:0005911,2.70e-08,82;UBERON:0001041,7.10e-08,87;UBERON:0000949,5.75e-07,45;UBERON:0005177,6.45e-07,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,1.49688046383725,0.988990300573997,1.81989568406299,0,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0,0.0620964029413835,0,0,0,0,0,0.468334905806882,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5522 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=9306 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-138bp_to_BC045682_5end | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_24_at_PPP2R2C_5end | |||
|id=chr4:6324609..6324619,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.74e-23;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.74e-23,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.20e-25;11!UBERON:0009497;2.66e-21;13!UBERON:0001041;8.88e-21;30!UBERON:0003104;2.91e-09;31 | |||
|ontology_enrichment_disease=DOID:178!2.89e-08!1;DOID:326!2.89e-08!1;DOID:3978!2.89e-08!1;DOID:3394!2.89e-08!1;DOID:5844!2.89e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:5409;7.35e-18;4!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9!DOID:7;1.03e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,7.35e-18,4;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9;DOID:7,7.07e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001893!1.16e-35!34;UBERON:0002619!2.87e-34!22;UBERON:0001869!1.16e-32!32;UBERON:0002791!1.10e-31!33;UBERON:0001950!4.75e-31!20;UBERON:0001049!1.05e-30!57;UBERON:0005068!1.05e-30!57;UBERON:0006241!1.05e-30!57;UBERON:0007135!1.05e-30!57;UBERON:0002020!1.06e-30!34;UBERON:0003528!1.06e-30!34;UBERON:0000956!4.27e-30!25;UBERON:0000203!4.27e-30!25;UBERON:0002616!1.42e-29!59;UBERON:0002780!2.80e-29!41;UBERON:0001890!2.80e-29!41;UBERON:0006240!2.80e-29!41;UBERON:0003080!1.55e-28!42;UBERON:0000955!1.29e-27!69;UBERON:0006238!1.29e-27!69;UBERON:0001017!1.16e-25!82;UBERON:0005743!2.49e-24!86;UBERON:0003075!5.86e-22!86;UBERON:0007284!5.86e-22!86;UBERON:0000073!9.83e-22!94;UBERON:0001016!9.83e-22!94;UBERON:0002346!7.70e-21!90;UBERON:0003056!5.60e-19!61;UBERON:0000200!2.48e-18!6;UBERON:0007023!1.05e-17!115;UBERON:0000033!3.52e-14!123;UBERON:0001871!3.95e-14!7;UBERON:0004121!1.41e-13!169;UBERON:0002021!2.17e-13!5;UBERON:0000153!2.27e-13!129;UBERON:0007811!2.27e-13!129;UBERON:0000924!3.54e-13!173;UBERON:0006601!3.54e-13!173;UBERON:0000025!1.22e-11!194;UBERON:0002771!3.12e-10!3;UBERON:0004111!1.37e-08!241;UBERON:0002336!3.83e-08!1;UBERON:0001018!3.83e-08!1;UBERON:0002473!3.83e-08!1;UBERON:0005340!3.83e-08!1;UBERON:0002316!3.83e-08!1;UBERON:0003544!3.83e-08!1;UBERON:0001020!3.83e-08!1;UBERON:0005970!3.83e-08!1;UBERON:0002437!3.83e-08!1;UBERON:0002022!4.72e-08!1;UBERON:0007190!5.43e-08!1;UBERON:0002581!5.82e-08!1;UBERON:0000483!1.59e-07!309;UBERON:0000119!2.06e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.66e-15;19!UBERON:0006925;5.66e-15;19!UBERON:0002423;1.15e-11;25!UBERON:0002365;6.52e-10;31!UBERON:0002330;6.52e-10;31!UBERON:0002368;5.80e-08;33!UBERON:0000949;2.59e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.66e-15,19;UBERON:0006925,5.66e-15,19;UBERON:0008836,5.66e-15,19;UBERON:0008835,4.26e-13,22;UBERON:0003894,4.26e-13,22;UBERON:0009854,1.41e-12,23;UBERON:0007499,1.15e-11,25;UBERON:0009497,1.15e-11,25;UBERON:0000015,1.15e-11,25;UBERON:0002423,1.15e-11,25;UBERON:0006235,1.15e-11,25;UBERON:0004161,1.15e-11,25;UBERON:0009856,2.91e-11,26;UBERON:0002365,1.25e-09,31;UBERON:0002330,1.25e-09,31;UBERON:0002368,1.18e-08,35;UBERON:0005911,2.70e-08,82;UBERON:0001041,7.10e-08,87;UBERON:0000949,5.75e-07,45;UBERON:0005177,6.45e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,1.49688046383725,0.988990300573997,1.81989568406299,0,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0,0.0620964029413835,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0.205116364240755,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3883824611688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p24@PPP2R2C | |||
}} |
Revision as of 11:16, 13 September 2013
Short description: | p24@PPP2R2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_24_at_PPP2R2C_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | -138bp_to_BC045682_5end |
EntrezGene: | PPP2R2C |
HGNC: | 9306 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.74e-23 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 5.66e-15 | 19 |
digestive gland | 5.66e-15 | 19 |
liver bud | 5.66e-15 | 19 |
hepatic diverticulum | 4.26e-13 | 22 |
liver primordium | 4.26e-13 | 22 |
digestive tract diverticulum | 1.41e-12 | 23 |
epithelial sac | 1.15e-11 | 25 |
epithelium of foregut-midgut junction | 1.15e-11 | 25 |
anatomical boundary | 1.15e-11 | 25 |
hepatobiliary system | 1.15e-11 | 25 |
foregut-midgut junction | 1.15e-11 | 25 |
septum transversum | 1.15e-11 | 25 |
sac | 2.91e-11 | 26 |
exocrine gland | 1.25e-09 | 31 |
exocrine system | 1.25e-09 | 31 |
endocrine gland | 1.18e-08 | 35 |
endo-epithelium | 2.70e-08 | 82 |
foregut | 7.10e-08 | 87 |
endocrine system | 5.75e-07 | 45 |
trunk region element | 6.45e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 7.35e-18 | 4 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |
lung carcinoma | 1.04e-08 | 9 |
disease of anatomical entity | 7.07e-08 | 39 |
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