FFCP PHASE1:Hg19::chr4:38665810..38665827,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51274|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16516|TSSclassifier=S|UniProt=P57682|association_with_transcript=0bp_to_ENST00000261438,ENST00000514033_5end|coexpression_cluster_id=C175|description=CAGE_peak_1_at_KLF3_5end|id=chr4:38665810..38665827,+|ontology_enrichment_celltype=CL:0002057!1.74e-12!42;CL:0000860!1.44e-11!45;CL:0000766!1.77e-09!76;CL:0000791!1.82e-08!18;CL:0000789!1.82e-08!18;CL:0002420!1.82e-08!18;CL:0002419!1.82e-08!18;CL:0000790!1.82e-08!18;CL:0000738!2.12e-08!140;CL:0002009!3.37e-07!65;CL:0002194!4.31e-07!63;CL:0000576!4.31e-07!63;CL:0000040!4.31e-07!63;CL:0000559!4.31e-07!63;CL:0000839!4.92e-07!70;CL:0002393!9.41e-07!9;CL:0002397!9.41e-07!9;CL:0000094!9.74e-07!8|ontology_enrichment_celltype_v019=CL:0000791;1.74e-08;18!CL:0000789;1.74e-08;18!CL:0002419;1.74e-08;18!CL:0000860;2.44e-07;33!CL:0002057;2.44e-07;33!CL:0000576;7.92e-07;48!CL:0000094;9.64e-07;8|ontology_enrichment_celltype_v019_2=CL:0000860,1.74e-12,42;CL:0002057,1.74e-12,42;CL:0000473,1.71e-10,48;CL:0000234,1.71e-10,48;CL:0000766,8.52e-10,72;CL:0000738,1.57e-08,136;CL:0000791,1.72e-08,18;CL:0000789,1.72e-08,18;CL:0002420,1.72e-08,18;CL:0002419,1.72e-08,18;CL:0000790,1.72e-08,18;CL:0002009,1.82e-07,61;CL:0002194,2.30e-07,59;CL:0000576,2.30e-07,59;CL:0000040,2.30e-07,59;CL:0000559,2.30e-07,59;CL:0000839,2.87e-07,66;CL:0000557,8.09e-07,67;CL:0002087,8.57e-07,115;CL:0002393,9.41e-07,9;CL:0002397,9.41e-07,9;CL:0000094,9.74e-07,8|ontology_enrichment_development_v019=CL:0002057;3.39e-09;42!CL:0000790;1.74e-08;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.02e-10!112;UBERON:0002390!8.64e-09!102;UBERON:0003061!8.64e-09!102;UBERON:0000178!1.86e-07!15;UBERON:0000179!1.86e-07!15;UBERON:0000463!1.86e-07!15;UBERON:0003081!2.09e-07!216;UBERON:0002405!2.60e-07!115|ontology_enrichment_uberon_v019=UBERON:0000178;1.98e-07;15!UBERON:0000179;1.98e-07;15!UBERON:0000463;1.98e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.00e-10,108;UBERON:0002390,5.27e-09,98;UBERON:0003061,5.27e-09,98;UBERON:0000178,1.86e-07,15;UBERON:0000179,1.86e-07,15;UBERON:0000463,1.86e-07,15;UBERON:0003081,2.04e-07,203|phase1_expression=8.17552706717505,7.92171938396638,10.9944435194858,5.00366491765652,1.78784437770915,4.36169262050184,2.53299878168311,6.31719873426831,15.6711376919903,8.84642171405432,6.97801167972428,24.4654336785793,15.0347177590219,9.0349437660834,5.63375538737457,25.5483555651675,40.9832279056304,31.403333886657,36.594959909288,3.44738962615006,3.87601313364081,4.38836610069323,13.4530913951597,13.003070381924,10.168953807179,0.687720651731561,0.738905305049512,1.10195093839151,110.535361794542,112.078184244386,115.957276363741,3.67768489791571,5.72291245678675,17.0086844676722,0,2.55904618477359,18.4968276780954,55.9535362617196,75.003623353833,68.3584242754933,18.5849843619137,14.2513213048351,20.3484698431007,30.0974354273699,31.3637033261712,31.5359279544161,21.8483294691344,21.7918980651568,24.1570969298181,31.6461631554366,26.1283920659683,26.4860097475215,35.5088051158717,30.3377801284398,36.5651513804723,24.6597464800812,14.7369321031237,16.8542613333813,18.3650335422542,26.9580382743919,24.2948107803636,31.6657248179247,34.9061400837856,30.2619572878213,11.3181603065148,12.4824749432051,21.7987787148451,29.6473425002957,37.5467701262545,35.6189705316391,21.7943820948013,22.4649357952414,20.5700551836575,108.373961878026,91.2072446850037,70.0259875997975,55.3780151552221,47.455898137916,70.237081386624,155.901970826463,138.247090653368,108.137179028663,15.839662001519,24.0300988955338,16.9006758234075,15.7890182349608,15.2150475073685,22.4153451582248,22.4755256746853,20.989182599778,25.0453706408157,51.6768726646426,35.1691369875211,51.5468181458201,43.7196679125598,17.9101177647052,102.682499999421,90.3924754323079,126.239320385699,57.8465274051746,175.998023982139,119.782294850888,99.3616314880348,25.8472259973603,108.709579858215,103.899396559718,80.9703552657397,41.2454049516674,46.5612464264364,9.70183637161689,6.35605040907451,14.2003512010176,146.06226471463,129.222219967331,105.580879043027,15.2967612641714,96.5715643876841,87.281371152588,81.4723408302799,43.3248963480772,37.1117568698159,37.0676297334866,30.8678994109434,36.7321574013181,51.2215978864618,52.8013272058158,37.7718878583681,128.22188869093,124.359691039331,102.535677949022,7.31420598941885,10.7312137552582,11.5076305659177,6.14446559053763,4.51204119572301,9.99440980829684,16.7010048880731,18.4921250715002,13.5184788544617,6.87361132133948,12.2968699970376,14.8661250689904,17.486173838042,22.6178510098502,14.2800853208061,14.4527681958392,4.78648657867915,24.8030249277556,23.4517913419852,17.08704506116,20.870052773504,8.60234595106124,24.6469756141392,18.6551620834923,11.3264847776675,19.5333809777448,21.7354765198283,29.4595105453035,35.9323925313577,62.5927545869933,21.3499538067848,24.328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274177812,5.29350562065608,7.26151150874288,4.35984243205998,24.2708014440562,61.146028626139,22.4142474360707,28.2480041723386,11.6680922811842,14.8739017232195,35.2083562290651,19.0959573231624,36.7026402344375,19.9688018016485,4.68908406739856,12.5715213351083,13.7568410708481,60.0295710041204,7.02390880031304,3.90539049306924,8.47415865654855,6.40499682958459,4.92277328116398,9.86863980342928,25.306770097854,9.67291843977913,39.4785901406349,9.64263304580916,4.70797211106354,13.9602088974425,8.42350107999801,29.5378892641587,0.921871900446234,19.2066570569909,14.4095833910883,6.971913997662,9.10092574806555,8.23112374001312,23.8619002265563,4.39923651764805,51.850350213051,46.5710947459843,6.0459725541214,5.25526856675755,11.7936297891483,1.26410889386181,9.41555545481815,23.992441577756,18.4393613887958,19.0638871029994,39.9481236399843,73.2735241522937,6.02318302348389,9.93988806136749,9.03262090447071,17.782256108019,4.582137370881,7.44495325594368,5.7332336338646,22.9303635185474,45.8361590983185,55.3507379419503,7.76914604625474,10.8822575267622,13.9177731760584,57.3138971809785,9.82545746540844,4.77481860387284,0.237840181555137,22.8151085718699,0.329821550236287,28.3810145905346,73.2382760444395,36.062327483153,28.6893550780529,13.4831576964648,35.5871586123455,11.7785080268967,19.6050624215877,17.7515405585028,18.6919826156599,30.826725097392,55.8205309851178,0,59.2799076170783,5.99921281916676,15.1656183042528,134.381895437359,10.0920442348999,17.9174478939314,7.73080654746605,8.43094478367342,3.05445483238264,30.6835567498932,8.55588541783528,10.1678638298912,16.439809360704,8.20081761428013,4.04282616265674,12.4164530991208,8.87302818755241,3.47382626845229,14.0599196288313,2.50707539292375,10.457460354117,5.62724673327975,13.2667110313405,17.3767433047984,61.4113867874825,24.0445075778378,6.3297131639286,14.4634084309349,7.96136224322355,16.611908310601,18.9990157620726,44.1964998230832,40.7257628291484,63.849746257829,44.75465616503,45.5744688468038,60.8896449210089,9.71218847487211,19.307228228694,49.8529871691557,16.4248659682418,14.3022489693954,24.82066687726,22.6357303223074,17.7120938360103,3.20568492303233|short_description=p1@KLF3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=51274 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16516 | |||
|TSSclassifier=S | |||
|UniProt=P57682 | |||
|association_with_transcript=0bp_to_ENST00000261438,ENST00000514033_5end | |||
|coexpression_cluster_id=C175 | |||
|description=CAGE_peak_1_at_KLF3_5end | |||
|id=chr4:38665810..38665827,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.74e-12!42;CL:0000860!1.44e-11!45;CL:0000766!1.77e-09!76;CL:0000791!1.82e-08!18;CL:0000789!1.82e-08!18;CL:0002420!1.82e-08!18;CL:0002419!1.82e-08!18;CL:0000790!1.82e-08!18;CL:0000738!2.12e-08!140;CL:0002009!3.37e-07!65;CL:0002194!4.31e-07!63;CL:0000576!4.31e-07!63;CL:0000040!4.31e-07!63;CL:0000559!4.31e-07!63;CL:0000839!4.92e-07!70;CL:0002393!9.41e-07!9;CL:0002397!9.41e-07!9;CL:0000094!9.74e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.74e-08;18!CL:0000789;1.74e-08;18!CL:0002419;1.74e-08;18!CL:0000860;2.44e-07;33!CL:0002057;2.44e-07;33!CL:0000576;7.92e-07;48!CL:0000094;9.64e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.74e-12,42;CL:0002057,1.74e-12,42;CL:0000473,1.71e-10,48;CL:0000234,1.71e-10,48;CL:0000766,8.52e-10,72;CL:0000738,1.57e-08,136;CL:0000791,1.72e-08,18;CL:0000789,1.72e-08,18;CL:0002420,1.72e-08,18;CL:0002419,1.72e-08,18;CL:0000790,1.72e-08,18;CL:0002009,1.82e-07,61;CL:0002194,2.30e-07,59;CL:0000576,2.30e-07,59;CL:0000040,2.30e-07,59;CL:0000559,2.30e-07,59;CL:0000839,2.87e-07,66;CL:0000557,8.09e-07,67;CL:0002087,8.57e-07,115;CL:0002393,9.41e-07,9;CL:0002397,9.41e-07,9;CL:0000094,9.74e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.39e-09;42!CL:0000790;1.74e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.02e-10!112;UBERON:0002390!8.64e-09!102;UBERON:0003061!8.64e-09!102;UBERON:0000178!1.86e-07!15;UBERON:0000179!1.86e-07!15;UBERON:0000463!1.86e-07!15;UBERON:0003081!2.09e-07!216;UBERON:0002405!2.60e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.98e-07;15!UBERON:0000179;1.98e-07;15!UBERON:0000463;1.98e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.00e-10,108;UBERON:0002390,5.27e-09,98;UBERON:0003061,5.27e-09,98;UBERON:0000178,1.86e-07,15;UBERON:0000179,1.86e-07,15;UBERON:0000463,1.86e-07,15;UBERON:0003081,2.04e-07,203 | |||
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| |||
|short_description=p1@KLF3 | |||
}} |
Revision as of 10:47, 13 September 2013
Short description: | p1@KLF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_KLF3_5end |
Coexpression cluster: | C175_Eosinophils_Neutrophils_CD4_Basophils_CD19_CD8_Natural |
Association with transcript: | 0bp_to_ENST00000261438, ENST00000514033_5end |
EntrezGene: | KLF3 |
HGNC: | 16516 |
UniProt: | P57682 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.74e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.74e-12 | 42 |
defensive cell | 1.71e-10 | 48 |
phagocyte | 1.71e-10 | 48 |
myeloid leukocyte | 8.52e-10 | 72 |
leukocyte | 1.57e-08 | 136 |
mature alpha-beta T cell | 1.72e-08 | 18 |
alpha-beta T cell | 1.72e-08 | 18 |
immature T cell | 1.72e-08 | 18 |
mature T cell | 1.72e-08 | 18 |
immature alpha-beta T cell | 1.72e-08 | 18 |
macrophage dendritic cell progenitor | 1.82e-07 | 61 |
monopoietic cell | 2.30e-07 | 59 |
monocyte | 2.30e-07 | 59 |
monoblast | 2.30e-07 | 59 |
promonocyte | 2.30e-07 | 59 |
myeloid lineage restricted progenitor cell | 2.87e-07 | 66 |
granulocyte monocyte progenitor cell | 8.09e-07 | 67 |
nongranular leukocyte | 8.57e-07 | 115 |
intermediate monocyte | 9.41e-07 | 9 |
CD14-positive, CD16-positive monocyte | 9.41e-07 | 9 |
granulocyte | 9.74e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.00e-10 | 108 |
hematopoietic system | 5.27e-09 | 98 |
blood island | 5.27e-09 | 98 |
blood | 1.86e-07 | 15 |
haemolymphatic fluid | 1.86e-07 | 15 |
organism substance | 1.86e-07 | 15 |
lateral plate mesoderm | 2.04e-07 | 203 |
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