FFCP PHASE1:Hg19::chr4:119273923..119273943,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8492|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9477|TSSclassifier=S|UniProt=P56730,Q96I80|association_with_transcript=-1bp_to_NM_003619,uc003ica.1_5end|description=CAGE_peak_3_at_PRSS12_5end|id=chr4:119273923..119273943,-|ontology_enrichment_celltype=CL:0000055!7.00e-28!180;CL:0000057!1.32e-16!75;CL:0000393!4.03e-14!60;CL:0000211!4.03e-14!60;CL:0000192!2.99e-12!42;CL:0000514!2.99e-12!42;CL:0000680!4.02e-12!57;CL:0000056!4.02e-12!57;CL:0000355!4.02e-12!57;CL:0000187!1.19e-11!54;CL:0000183!6.46e-11!59;CL:0002321!3.01e-09!248;CL:0000220!4.73e-09!246;CL:0000359!1.67e-08!32;CL:0002620!4.92e-08!23|ontology_enrichment_celltype_v019=CL:0000192;5.28e-09;43!CL:0000359;6.81e-08;32!CL:0000057;2.30e-07;73!CL:0002556;7.35e-07;6!CL:0002620;7.53e-07;23|ontology_enrichment_celltype_v019_2=CL:0000057,5.50e-18,76;CL:0000393,1.65e-13,61;CL:0000211,1.65e-13,61;CL:0000192,2.38e-12,43;CL:0000514,2.38e-12,43;CL:0000680,8.66e-11,58;CL:0000056,8.66e-11,58;CL:0000355,8.66e-11,58;CL:0000187,2.07e-10,55;CL:0000359,6.72e-08,32;CL:0002556,7.52e-07,6;CL:0002620,8.07e-07,23|ontology_enrichment_development_v019=CL:0000514;5.28e-09;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!7.78e-19!83;UBERON:0002329!7.78e-19!83;UBERON:0003077!7.78e-19!83;UBERON:0003059!7.78e-19!83;UBERON:0007282!7.78e-19!83;UBERON:0009618!7.78e-19!83;UBERON:0007285!7.78e-19!83;UBERON:0000475!2.41e-16!365;UBERON:0003102!9.30e-14!95;UBERON:0004290!1.04e-13!70;UBERON:0000486!1.38e-13!82;UBERON:0001134!1.23e-11!61;UBERON:0002036!1.23e-11!61;UBERON:0003082!1.23e-11!61;UBERON:0000468!1.68e-11!659;UBERON:0002385!5.11e-11!63;UBERON:0001015!5.11e-11!63;UBERON:0000383!5.11e-11!63;UBERON:0000481!9.01e-11!347;UBERON:0001444!1.17e-10!48;UBERON:0002097!2.08e-08!40;UBERON:0005256!3.37e-08!143;UBERON:0000467!4.86e-08!625;UBERON:0000480!6.89e-08!626;UBERON:0000033!2.01e-07!123;UBERON:0000922!2.29e-07!612;UBERON:0000924!2.39e-07!173;UBERON:0006601!2.39e-07!173;UBERON:0002199!2.60e-07!45;UBERON:0002416!2.60e-07!45;UBERON:0004121!2.80e-07!169;UBERON:0000153!5.83e-07!129;UBERON:0007811!5.83e-07!129;UBERON:0000075!7.27e-07!13;UBERON:0005944!7.27e-07!13;UBERON:0004288!7.27e-07!13;UBERON:0003089!7.27e-07!13;UBERON:0002100!7.82e-07!216|ontology_enrichment_uberon_v019=UBERON:0001444;4.40e-07;48!UBERON:0001758;7.35e-07;6!UBERON:0003672;7.35e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.67e-12,73;UBERON:0002329,3.66e-12,71;UBERON:0003059,3.66e-12,71;UBERON:0007282,3.66e-12,71;UBERON:0004290,3.66e-12,71;UBERON:0009618,3.66e-12,71;UBERON:0003077,8.24e-12,72;UBERON:0007285,8.24e-12,72;UBERON:0003102,1.61e-10,99;UBERON:0001134,2.76e-10,62;UBERON:0002036,2.76e-10,62;UBERON:0003082,2.76e-10,62;UBERON:0000486,2.99e-10,83;UBERON:0007503,6.40e-10,78;UBERON:0002385,1.27e-09,64;UBERON:0001015,1.27e-09,64;UBERON:0000383,1.27e-09,64;UBERON:0001444,2.49e-09,49;UBERON:0000033,3.06e-08,56;UBERON:0000153,2.29e-07,62;UBERON:0007811,2.29e-07,62;UBERON:0001758,7.52e-07,6;UBERON:0003672,7.52e-07,6;UBERON:0000075,9.91e-07,16|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,1.0007329835313,0.893922188854576,1.74467704820074,0,0,0,0.245733936501509,0.697801167972428,0,0,1.8564952944007,1.98838425436749,0.672325146451775,1.20538905604795,0.730310090387373,0.975865597581014,4.80172126499473,19.380065668204,3.13454721478088,0,0.273748850145768,0.251085279189606,0,0.0821005894499457,0,0,0,0,0.919421224478927,0,0.739508020333575,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,1.10864698731282,1.22968699970376,2.03017567021455,1.09288586487763,0.370784442784429,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0.516833518338658,0.35576626268671,0,1.20848795132744,3.80136052859256,1.22031028774085,0.735326160691737,0.81014194788176,0,0,0,0,0,0,0,0,0.872188104285069,6.46063537203914,8.99076632818516,2.51577443545116,17.4970338656776,4.965357350777,5.04609840128076,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,1.51357427644931,2.30470369792,8.20125011418288,2.49728061464256,0.570471821544449,0.896692083310806,5.16711794032565,3.88495066483516,5.05622904128095,4.28723759635276,9.45824243300613,4.75298593408521,15.4440371446667,16.3196173323848,0,0.718618141816238,7.57512512793298,7.38199267244589,6.64953877162039,5.26773145057006,7.35570709917647,6.61047459189026,0,2.33206526395521,2.56268866582281,2.54318281391474,12.6038260355449,6.59536187126009,6.44101350114073,4.28068769562657,0.843881661206331,0.68205903612839,2.27190396819703,2.57739716198438,11.9618082045921,0.710019185033229,0.806016785821122,2.54340888465731,1.15956511897978,0.545492241181669,0.573609190778008,0.243947412259191,1.32529768321485,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8492 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9477 | |||
|TSSclassifier=S | |||
|UniProt=P56730,Q96I80 | |||
|association_with_transcript=-1bp_to_NM_003619,uc003ica.1_5end | |||
|description=CAGE_peak_3_at_PRSS12_5end | |||
|id=chr4:119273923..119273943,- | |||
|ontology_enrichment_celltype=CL:0000055!7.00e-28!180;CL:0000057!1.32e-16!75;CL:0000393!4.03e-14!60;CL:0000211!4.03e-14!60;CL:0000192!2.99e-12!42;CL:0000514!2.99e-12!42;CL:0000680!4.02e-12!57;CL:0000056!4.02e-12!57;CL:0000355!4.02e-12!57;CL:0000187!1.19e-11!54;CL:0000183!6.46e-11!59;CL:0002321!3.01e-09!248;CL:0000220!4.73e-09!246;CL:0000359!1.67e-08!32;CL:0002620!4.92e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000192;5.28e-09;43!CL:0000359;6.81e-08;32!CL:0000057;2.30e-07;73!CL:0002556;7.35e-07;6!CL:0002620;7.53e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.50e-18,76;CL:0000393,1.65e-13,61;CL:0000211,1.65e-13,61;CL:0000192,2.38e-12,43;CL:0000514,2.38e-12,43;CL:0000680,8.66e-11,58;CL:0000056,8.66e-11,58;CL:0000355,8.66e-11,58;CL:0000187,2.07e-10,55;CL:0000359,6.72e-08,32;CL:0002556,7.52e-07,6;CL:0002620,8.07e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;5.28e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.78e-19!83;UBERON:0002329!7.78e-19!83;UBERON:0003077!7.78e-19!83;UBERON:0003059!7.78e-19!83;UBERON:0007282!7.78e-19!83;UBERON:0009618!7.78e-19!83;UBERON:0007285!7.78e-19!83;UBERON:0000475!2.41e-16!365;UBERON:0003102!9.30e-14!95;UBERON:0004290!1.04e-13!70;UBERON:0000486!1.38e-13!82;UBERON:0001134!1.23e-11!61;UBERON:0002036!1.23e-11!61;UBERON:0003082!1.23e-11!61;UBERON:0000468!1.68e-11!659;UBERON:0002385!5.11e-11!63;UBERON:0001015!5.11e-11!63;UBERON:0000383!5.11e-11!63;UBERON:0000481!9.01e-11!347;UBERON:0001444!1.17e-10!48;UBERON:0002097!2.08e-08!40;UBERON:0005256!3.37e-08!143;UBERON:0000467!4.86e-08!625;UBERON:0000480!6.89e-08!626;UBERON:0000033!2.01e-07!123;UBERON:0000922!2.29e-07!612;UBERON:0000924!2.39e-07!173;UBERON:0006601!2.39e-07!173;UBERON:0002199!2.60e-07!45;UBERON:0002416!2.60e-07!45;UBERON:0004121!2.80e-07!169;UBERON:0000153!5.83e-07!129;UBERON:0007811!5.83e-07!129;UBERON:0000075!7.27e-07!13;UBERON:0005944!7.27e-07!13;UBERON:0004288!7.27e-07!13;UBERON:0003089!7.27e-07!13;UBERON:0002100!7.82e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001444;4.40e-07;48!UBERON:0001758;7.35e-07;6!UBERON:0003672;7.35e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.67e-12,73;UBERON:0002329,3.66e-12,71;UBERON:0003059,3.66e-12,71;UBERON:0007282,3.66e-12,71;UBERON:0004290,3.66e-12,71;UBERON:0009618,3.66e-12,71;UBERON:0003077,8.24e-12,72;UBERON:0007285,8.24e-12,72;UBERON:0003102,1.61e-10,99;UBERON:0001134,2.76e-10,62;UBERON:0002036,2.76e-10,62;UBERON:0003082,2.76e-10,62;UBERON:0000486,2.99e-10,83;UBERON:0007503,6.40e-10,78;UBERON:0002385,1.27e-09,64;UBERON:0001015,1.27e-09,64;UBERON:0000383,1.27e-09,64;UBERON:0001444,2.49e-09,49;UBERON:0000033,3.06e-08,56;UBERON:0000153,2.29e-07,62;UBERON:0007811,2.29e-07,62;UBERON:0001758,7.52e-07,6;UBERON:0003672,7.52e-07,6;UBERON:0000075,9.91e-07,16 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,1.0007329835313,0.893922188854576,1.74467704820074,0,0,0,0.245733936501509,0.697801167972428,0,0,1.8564952944007,1.98838425436749,0.672325146451775,1.20538905604795,0.730310090387373,0.975865597581014,4.80172126499473,19.380065668204,3.13454721478088,0,0.273748850145768,0.251085279189606,0,0.0821005894499457,0,0,0,0,0.919421224478927,0,0.739508020333575,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,1.10864698731282,1.22968699970376,2.03017567021455,1.09288586487763,0.370784442784429,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0.516833518338658,0.35576626268671,0,1.20848795132744,3.80136052859256,1.22031028774085,0.735326160691737,0.81014194788176,0,0,0,0,0,0,0,0,0.872188104285069,6.46063537203914,8.99076632818516,2.51577443545116,17.4970338656776,4.965357350777,5.04609840128076,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,1.51357427644931,2.30470369792,8.20125011418288,2.49728061464256,0.570471821544449,0.896692083310806,5.16711794032565,3.88495066483516,5.05622904128095,4.28723759635276,9.45824243300613,4.75298593408521,15.4440371446667,16.3196173323848,0,0.718618141816238,7.57512512793298,7.38199267244589,6.64953877162039,5.26773145057006,7.35570709917647,6.61047459189026,0,2.33206526395521,2.56268866582281,2.54318281391474,12.6038260355449,6.59536187126009,6.44101350114073,4.28068769562657,0.843881661206331,0.68205903612839,2.27190396819703,2.57739716198438,11.9618082045921,0.710019185033229,0.806016785821122,2.54340888465731,1.15956511897978,0.545492241181669,0.573609190778008,0.243947412259191,1.32529768321485,0.929551542956147,0.725627385107593,0.504641701751257,1.09493207722749,0,6.43240938192885,1.38134921352481,3.71494342425583,2.88751792667834,0.118306800039844,0,0.241011029883482,0,0,0.237270619111097,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,2.05881372358231,0.98775256867763,0,0.201057944823262,0.925884451585296,7.16778271682714,9.35941306751621,1.44331342025273,2.20267769452646,10.9190085639314,2.45422961193825,2.31492756288305,2.09279567458058,0,0,0,0,0,0.93733833986777,1.6798212819886,0.850650583454319,0.985143749731331,0.581267877027924,0.383382679165211,0,0,0.207328115540772,0.576479813667846,0.50496973370552,0,0,0,1.71072446022705,0.205654985406647,0,0.285826432630578,0.448524337381443,4.3596006883328,0.5867062865676,14.9955190279022,0,0,3.98907174877306,5.2003718455683,1.28603687131071,4.25547396069835,2.66422179016099,0,0.542621605391443,1.64648067356154,0.325736184293735,1.06617584622764,0,0,0,0.199945982364114,0,0,0,0.718874566474748,2.29723871668228,5.70547620162874,1.44781306667579,2.26023954805422,0.179060963239896,0,0,0,0,0,9.10978977003352,3.09315525111078,6.5331343480396,5.74144876487847,0,0,0,0.613457458595699,3.00102312635806,2.98391526069709,8.7347761842939,21.5899076444566,25.8631960655653,18.9769092288195,1.50473049863859,6.82222512167955,5.17365356462525,1.32845119707087,2.21243002250044,6.34250385617005,0.979005787313703,1.71571711905428,0,0,0,0,1.66435439510497,0.30239029332968,3.2254015016441,0.767309866440312,1.96462066103151,0.896974044789907,2.55853624533352,5.46903331888265,2.96836132889982,1.85051632563187,0.710246901252508,1.31403449622095,1.55776328755086,1.27831416305955,0.241718899183244,0.40101294060657,0.368323955743585,1.37777337797528,8.37619372830898,6.68734516293063,0,0,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0,0,0,0.984043937099117,0.976135183992909,0.515205058238611,0,0,0.574265537996172,3.25030123018261,0,1.25671933779759,0.770243085573222,0.307007349452259,1.24052915236078,0.107420244868274,1.30515024522806,0.852266274161009,0.801288320820636,0.165284915360978,0.384380134730212,0.382838137483752,1.4162089319777,3.71876439437829,16.9998667288546,2.7881490806424,0.308033580176089,1.06461206063404,3.47973196830029,2.59453906745488,0.429374660225974,2.232950216158,0.949138274156178,1.14378116354295,3.83846686967001,7.70290178461057,0.318203247925937,1.56989728039846,4.13706652441624,3.0199073270966,2.35624804691373,1.01091240786658,3.17020642346017,0,0.975267478179181,1.21856744815642,3.16950440270266,3.27599787379166,6.50464986987079,1.13008116620243,0,5.30751180192976,2.19225442626881,5.20897980840019,9.83842128069949,2.23201414658974,4.3375289733965,5.91560765317707,2.29458163526482,7.66342519902345,2.85336841185,0.354761064070598,0.633322905892992,0.329294892959902,8.34840982284573,17.8466707324941,0.192444225451024,0.670302275535787,4.3556393944529,0.564862804660675,0.43050537267123,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27753871307098,0,7.98825987201991,5.5919026973104,6.34026738505252,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0.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| |||
|short_description=p3@PRSS12 | |||
}} |
Revision as of 02:11, 13 September 2013
Short description: | p3@PRSS12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PRSS12_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_NM_003619, uc003ica.1_5end |
EntrezGene: | PRSS12 |
HGNC: | 9477 |
UniProt: | P56730Q96I80 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.50e-18 | 76 |
electrically responsive cell | 1.65e-13 | 61 |
electrically active cell | 1.65e-13 | 61 |
smooth muscle cell | 2.38e-12 | 43 |
smooth muscle myoblast | 2.38e-12 | 43 |
muscle precursor cell | 8.66e-11 | 58 |
myoblast | 8.66e-11 | 58 |
multi-potent skeletal muscle stem cell | 8.66e-11 | 58 |
muscle cell | 2.07e-10 | 55 |
vascular associated smooth muscle cell | 6.72e-08 | 32 |
fibroblast of periodontium | 7.52e-07 | 6 |
skin fibroblast | 8.07e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.67e-12 | 73 |
somite | 3.66e-12 | 71 |
presomitic mesoderm | 3.66e-12 | 71 |
presumptive segmental plate | 3.66e-12 | 71 |
dermomyotome | 3.66e-12 | 71 |
trunk paraxial mesoderm | 3.66e-12 | 71 |
paraxial mesoderm | 8.24e-12 | 72 |
presumptive paraxial mesoderm | 8.24e-12 | 72 |
surface structure | 1.61e-10 | 99 |
skeletal muscle tissue | 2.76e-10 | 62 |
striated muscle tissue | 2.76e-10 | 62 |
myotome | 2.76e-10 | 62 |
multilaminar epithelium | 2.99e-10 | 83 |
epithelial vesicle | 6.40e-10 | 78 |
muscle tissue | 1.27e-09 | 64 |
musculature | 1.27e-09 | 64 |
musculature of body | 1.27e-09 | 64 |
subdivision of head | 2.49e-09 | 49 |
head | 3.06e-08 | 56 |
anterior region of body | 2.29e-07 | 62 |
craniocervical region | 2.29e-07 | 62 |
periodontium | 7.52e-07 | 6 |
dentition | 7.52e-07 | 6 |
subdivision of skeletal system | 9.91e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.