FFCP PHASE1:Hg19::chr6:40555176..40555188,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57497|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21226|TSSclassifier=S|UniProt=Q9ULH4|association_with_transcript=15bp_to_ENST00000338305_5end|coexpression_cluster_id=C1798|description=CAGE_peak_6_at_LRFN2_5end|id=chr6:40555176..40555188,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006238;1.39e-07;10!UBERON:0006215;2.55e-07;3|ontology_enrichment_disease=DOID:171!2.65e-08!10|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!5.01e-55!69;UBERON:0006238!5.01e-55!69;UBERON:0001049!1.60e-53!57;UBERON:0005068!1.60e-53!57;UBERON:0006241!1.60e-53!57;UBERON:0007135!1.60e-53!57;UBERON:0002616!1.86e-51!59;UBERON:0002619!1.25e-46!22;UBERON:0001950!6.34e-46!20;UBERON:0002346!9.36e-46!90;UBERON:0005743!2.77e-45!86;UBERON:0000073!3.19e-45!94;UBERON:0001016!3.19e-45!94;UBERON:0001017!4.55e-45!82;UBERON:0001893!1.22e-43!34;UBERON:0002020!1.79e-43!34;UBERON:0003528!1.79e-43!34;UBERON:0001869!1.72e-42!32;UBERON:0002780!2.21e-42!41;UBERON:0001890!2.21e-42!41;UBERON:0006240!2.21e-42!41;UBERON:0003080!3.04e-41!42;UBERON:0002791!7.02e-41!33;UBERON:0000956!1.10e-40!25;UBERON:0000203!1.10e-40!25;UBERON:0003075!4.04e-40!86;UBERON:0007284!4.04e-40!86;UBERON:0000033!8.88e-35!123;UBERON:0000153!1.19e-34!129;UBERON:0007811!1.19e-34!129;UBERON:0003056!2.64e-34!61;UBERON:0007023!8.51e-32!115;UBERON:0000924!2.47e-29!173;UBERON:0006601!2.47e-29!173;UBERON:0004121!1.96e-25!169;UBERON:0000200!7.97e-21!6;UBERON:0004733!1.37e-16!12;UBERON:0002028!1.37e-16!12;UBERON:0007277!1.37e-16!12;UBERON:0001871!2.01e-15!7;UBERON:0004732!3.28e-15!13;UBERON:0002680!5.12e-13!9;UBERON:0001895!5.12e-13!9;UBERON:0010092!5.12e-13!9;UBERON:0003076!5.28e-13!15;UBERON:0003057!5.28e-13!15;UBERON:0000064!2.64e-12!219;UBERON:0001872!3.04e-12!5;UBERON:0000025!4.36e-12!194;UBERON:0002021!4.63e-12!5;UBERON:0000349!1.99e-11!5;UBERON:0002771!5.97e-11!3;UBERON:0000988!3.51e-10!3;UBERON:0000475!7.49e-10!365;UBERON:0002298!7.64e-10!8;UBERON:0004111!6.89e-09!241;UBERON:0000477!8.87e-09!286;UBERON:0001870!2.45e-08!2;UBERON:0001876!3.49e-08!2;UBERON:0002148!1.81e-07!2;UBERON:0009662!1.81e-07!2;UBERON:0000483!6.29e-07!309;UBERON:0000481!8.17e-07!347;UBERON:0000119!8.81e-07!312|ontology_enrichment_uberon_v019=UBERON:0001872;6.30e-33;5!UBERON:0001950;1.24e-30;20!UBERON:0002619;5.67e-28;22!UBERON:0000956;9.48e-25;25!UBERON:0000203;9.48e-25;25!UBERON:0002581;2.47e-19;1!UBERON:0002902;2.47e-19;1!UBERON:0009899;2.47e-19;1!UBERON:0001869;5.30e-18;32!UBERON:0003528;9.20e-18;34!UBERON:0002020;9.20e-18;34!UBERON:0002791;7.48e-17;32!UBERON:0001893;5.60e-16;34!UBERON:0002021;2.17e-15;5!UBERON:0000955;6.20e-14;68!UBERON:0002780;2.41e-11;41!UBERON:0001890;2.41e-11;41!UBERON:0001017;3.69e-10;75!UBERON:0001016;7.59e-10;83!UBERON:0000073;9.14e-10;53!UBERON:0002616;9.14e-10;53!UBERON:0002114;2.55e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001872,8.30e-33,5;UBERON:0001950,1.70e-30,20;UBERON:0002619,7.54e-28,22;UBERON:0000956,1.22e-24,25;UBERON:0000203,1.22e-24,25;UBERON:0000955,2.70e-20,68;UBERON:0006238,2.70e-20,68;UBERON:0002902,1.88e-19,1;UBERON:0009899,1.88e-19,1;UBERON:0002791,2.06e-19,32;UBERON:0001869,2.06e-19,32;UBERON:0002581,2.71e-19,1;UBERON:0003528,2.66e-18,34;UBERON:0002020,2.66e-18,34;UBERON:0001893,2.66e-18,34;UBERON:0001017,4.86e-17,81;UBERON:0000073,5.70e-16,53;UBERON:0002616,5.70e-16,53;UBERON:0002021,2.17e-15,5;UBERON:0001016,2.54e-15,89;UBERON:0002780,3.05e-15,41;UBERON:0001890,3.05e-15,41;UBERON:0003080,3.05e-15,41;UBERON:0006240,3.05e-15,41;UBERON:0001049,4.08e-15,56;UBERON:0005068,4.08e-15,56;UBERON:0006241,4.08e-15,56;UBERON:0007135,4.08e-15,56;UBERON:0003056,2.75e-10,61;UBERON:0003075,2.77e-10,82;UBERON:0007284,2.77e-10,82;UBERON:0002346,8.56e-10,86;UBERON:0011216,6.17e-09,223;UBERON:0010371,4.75e-08,104;UBERON:0004121,8.39e-08,171;UBERON:0000924,8.39e-08,171;UBERON:0006601,8.39e-08,171;UBERON:0002114,2.05e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57497 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21226 | |||
|TSSclassifier=S | |||
|UniProt=Q9ULH4 | |||
|association_with_transcript=15bp_to_ENST00000338305_5end | |||
|coexpression_cluster_id=C1798 | |||
|description=CAGE_peak_6_at_LRFN2_5end | |||
|id=chr6:40555176..40555188,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;1.39e-07;10!UBERON:0006215;2.55e-07;3 | |||
|ontology_enrichment_disease=DOID:171!2.65e-08!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!5.01e-55!69;UBERON:0006238!5.01e-55!69;UBERON:0001049!1.60e-53!57;UBERON:0005068!1.60e-53!57;UBERON:0006241!1.60e-53!57;UBERON:0007135!1.60e-53!57;UBERON:0002616!1.86e-51!59;UBERON:0002619!1.25e-46!22;UBERON:0001950!6.34e-46!20;UBERON:0002346!9.36e-46!90;UBERON:0005743!2.77e-45!86;UBERON:0000073!3.19e-45!94;UBERON:0001016!3.19e-45!94;UBERON:0001017!4.55e-45!82;UBERON:0001893!1.22e-43!34;UBERON:0002020!1.79e-43!34;UBERON:0003528!1.79e-43!34;UBERON:0001869!1.72e-42!32;UBERON:0002780!2.21e-42!41;UBERON:0001890!2.21e-42!41;UBERON:0006240!2.21e-42!41;UBERON:0003080!3.04e-41!42;UBERON:0002791!7.02e-41!33;UBERON:0000956!1.10e-40!25;UBERON:0000203!1.10e-40!25;UBERON:0003075!4.04e-40!86;UBERON:0007284!4.04e-40!86;UBERON:0000033!8.88e-35!123;UBERON:0000153!1.19e-34!129;UBERON:0007811!1.19e-34!129;UBERON:0003056!2.64e-34!61;UBERON:0007023!8.51e-32!115;UBERON:0000924!2.47e-29!173;UBERON:0006601!2.47e-29!173;UBERON:0004121!1.96e-25!169;UBERON:0000200!7.97e-21!6;UBERON:0004733!1.37e-16!12;UBERON:0002028!1.37e-16!12;UBERON:0007277!1.37e-16!12;UBERON:0001871!2.01e-15!7;UBERON:0004732!3.28e-15!13;UBERON:0002680!5.12e-13!9;UBERON:0001895!5.12e-13!9;UBERON:0010092!5.12e-13!9;UBERON:0003076!5.28e-13!15;UBERON:0003057!5.28e-13!15;UBERON:0000064!2.64e-12!219;UBERON:0001872!3.04e-12!5;UBERON:0000025!4.36e-12!194;UBERON:0002021!4.63e-12!5;UBERON:0000349!1.99e-11!5;UBERON:0002771!5.97e-11!3;UBERON:0000988!3.51e-10!3;UBERON:0000475!7.49e-10!365;UBERON:0002298!7.64e-10!8;UBERON:0004111!6.89e-09!241;UBERON:0000477!8.87e-09!286;UBERON:0001870!2.45e-08!2;UBERON:0001876!3.49e-08!2;UBERON:0002148!1.81e-07!2;UBERON:0009662!1.81e-07!2;UBERON:0000483!6.29e-07!309;UBERON:0000481!8.17e-07!347;UBERON:0000119!8.81e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001872;6.30e-33;5!UBERON:0001950;1.24e-30;20!UBERON:0002619;5.67e-28;22!UBERON:0000956;9.48e-25;25!UBERON:0000203;9.48e-25;25!UBERON:0002581;2.47e-19;1!UBERON:0002902;2.47e-19;1!UBERON:0009899;2.47e-19;1!UBERON:0001869;5.30e-18;32!UBERON:0003528;9.20e-18;34!UBERON:0002020;9.20e-18;34!UBERON:0002791;7.48e-17;32!UBERON:0001893;5.60e-16;34!UBERON:0002021;2.17e-15;5!UBERON:0000955;6.20e-14;68!UBERON:0002780;2.41e-11;41!UBERON:0001890;2.41e-11;41!UBERON:0001017;3.69e-10;75!UBERON:0001016;7.59e-10;83!UBERON:0000073;9.14e-10;53!UBERON:0002616;9.14e-10;53!UBERON:0002114;2.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,8.30e-33,5;UBERON:0001950,1.70e-30,20;UBERON:0002619,7.54e-28,22;UBERON:0000956,1.22e-24,25;UBERON:0000203,1.22e-24,25;UBERON:0000955,2.70e-20,68;UBERON:0006238,2.70e-20,68;UBERON:0002902,1.88e-19,1;UBERON:0009899,1.88e-19,1;UBERON:0002791,2.06e-19,32;UBERON:0001869,2.06e-19,32;UBERON:0002581,2.71e-19,1;UBERON:0003528,2.66e-18,34;UBERON:0002020,2.66e-18,34;UBERON:0001893,2.66e-18,34;UBERON:0001017,4.86e-17,81;UBERON:0000073,5.70e-16,53;UBERON:0002616,5.70e-16,53;UBERON:0002021,2.17e-15,5;UBERON:0001016,2.54e-15,89;UBERON:0002780,3.05e-15,41;UBERON:0001890,3.05e-15,41;UBERON:0003080,3.05e-15,41;UBERON:0006240,3.05e-15,41;UBERON:0001049,4.08e-15,56;UBERON:0005068,4.08e-15,56;UBERON:0006241,4.08e-15,56;UBERON:0007135,4.08e-15,56;UBERON:0003056,2.75e-10,61;UBERON:0003075,2.77e-10,82;UBERON:0007284,2.77e-10,82;UBERON:0002346,8.56e-10,86;UBERON:0011216,6.17e-09,223;UBERON:0010371,4.75e-08,104;UBERON:0004121,8.39e-08,171;UBERON:0000924,8.39e-08,171;UBERON:0006601,8.39e-08,171;UBERON:0002114,2.05e-07,2 | |||
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|short_description=p6@LRFN2 | |||
}} |
Revision as of 20:56, 13 September 2013
Short description: | p6@LRFN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_LRFN2_5end |
Coexpression cluster: | C1798_brain_temporal_medial_postcentral_insula_parietal_occipital |
Association with transcript: | 15bp_to_ENST00000338305_5end |
EntrezGene: | LRFN2 |
HGNC: | 21226 |
UniProt: | Q9ULH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.