FFCP PHASE1:Hg19::chr6:41703952..41703994,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7942|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11753|TSSclassifier=S|UniProt=P19484,B0QYS6|association_with_transcript=2bp_to_ENST00000358871,ENST00000403298,NM_001167827,uc003oqu.1_5end|coexpression_cluster_id=C83|description=CAGE_peak_4_at_TFEB_5end|id=chr6:41703952..41703994,-|ontology_enrichment_celltype=CL:0002543!4.15e-07!6|ontology_enrichment_celltype_v019=CL:0000039;2.57e-14;7!CL:0000586;2.57e-14;7!CL:0000650;1.29e-12;2!CL:1000500;1.29e-12;2!CL:1000618;1.29e-12;2!CL:1001318;1.29e-12;2!CL:0002173;1.29e-12;2!CL:0002543;2.75e-09;6!CL:0002618;1.05e-08;3!CL:0000083;3.73e-07;4!CL:0000669;9.92e-07;4|ontology_enrichment_celltype_v019_2=CL:0000039,2.50e-14,7;CL:0000586,2.50e-14,7;CL:0000650,7.57e-13,2;CL:1000500,7.57e-13,2;CL:1000618,7.57e-13,2;CL:1001318,7.57e-13,2;CL:0002173,7.57e-13,2;CL:0002543,1.89e-09,6;CL:0002618,8.69e-09,3;CL:0000083,3.74e-07,4;CL:0000669,7.64e-07,4|ontology_enrichment_development_v019=UBERON:0003124;1.05e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1799;1.12e-07;1!DOID:10165;1.12e-07;1!DOID:1798;1.12e-07;1!DOID:1793;3.73e-07;4|ontology_enrichment_disease_v019_2=DOID:1799,1.12e-07,1;DOID:10165,1.12e-07,1;DOID:1798,1.12e-07,1;DOID:1793,3.74e-07,4|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003891;1.12e-13;4!UBERON:0003567;1.29e-12;2!UBERON:0003838;1.29e-12;2!UBERON:0003586;1.29e-12;2!UBERON:0005169;1.29e-12;2!UBERON:0002321;1.29e-12;2!UBERON:0005215;1.29e-12;2!UBERON:0002303;1.29e-12;2!UBERON:0002319;1.29e-12;2!UBERON:0000996;3.84e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0003891,1.17e-13,4;UBERON:0003567,7.57e-13,2;UBERON:0003838,7.57e-13,2;UBERON:0003586,7.57e-13,2;UBERON:0005169,7.57e-13,2;UBERON:0002321,7.57e-13,2;UBERON:0005215,7.57e-13,2;UBERON:0002303,7.57e-13,2;UBERON:0002319,7.57e-13,2;UBERON:0000996,3.62e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.990130823680373,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0.625098097988558,1.57170560838319,1.12611480483322,1.53316637465883,0.949265659568129,0.549605231791222,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,1.06748995729705,0.24666754841716,0.311211035399766,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0.408308342509787,0.245668634623536,0.309977343527296,0,0,0,0,0.336672227908132,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0.206105058476878,0,0.18611685633159,0,0,0.504867548488229,0,0,0,0.10075209822764,0.508681776931463,0,0,0,0,0.132529768321485,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0.769494313892781,0,0,0.4115740113314,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0.325808305310325,1.03993478527958,0,0.231860809950154,0.70445216541493,0.144366447761074,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,1.17217447210047,0,0.205654985406647,0,0.571652865261156,0.112131084345361,0,0.07333828582095,0.129271715757778,3.57656445851882,0,0,0,0.771622122786426,0,0,0,0.542621605391443,0,0,0,0,0.602878754119172,2.61460037580088,0.99972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0.483437798366489,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,1.35473218771926,1.50506932156456,0,0,0.223874754722178,0,0,0,0,0,5.46117361732928,0,0.41254749960294,0,0,0,0.096670718292122,0,0,0,0.322260734604821,0.290033387828457,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0.6970372701606,0.308033580176089,0.532306030317022,0,0,0,0,0.632758849437452,0.571890581771475,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0,0.379473173765715,1.04980416073495,0,0,0,6.87249745670488,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.640944426764839,0,0.980160863924127,0,0.28853842595289,0.213425530045242,0.637705090915289,0,0,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0.343505344755765,0.307240764308458,0.223676107892416,0.166849141711909,1.36771666781428,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0.494411622680279,0.211125408127993,0,0,0,0,0,0.311039587661807,0,0.179021174675609,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0.087459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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7942 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11753 | |||
|TSSclassifier=S | |||
|UniProt=P19484,B0QYS6 | |||
|association_with_transcript=2bp_to_ENST00000358871,ENST00000403298,NM_001167827,uc003oqu.1_5end | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_4_at_TFEB_5end | |||
|id=chr6:41703952..41703994,- | |||
|ontology_enrichment_celltype=CL:0002543!4.15e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.57e-14;7!CL:0000586;2.57e-14;7!CL:0000650;1.29e-12;2!CL:1000500;1.29e-12;2!CL:1000618;1.29e-12;2!CL:1001318;1.29e-12;2!CL:0002173;1.29e-12;2!CL:0002543;2.75e-09;6!CL:0002618;1.05e-08;3!CL:0000083;3.73e-07;4!CL:0000669;9.92e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.50e-14,7;CL:0000586,2.50e-14,7;CL:0000650,7.57e-13,2;CL:1000500,7.57e-13,2;CL:1000618,7.57e-13,2;CL:1001318,7.57e-13,2;CL:0002173,7.57e-13,2;CL:0002543,1.89e-09,6;CL:0002618,8.69e-09,3;CL:0000083,3.74e-07,4;CL:0000669,7.64e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.05e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;1.12e-07;1!DOID:10165;1.12e-07;1!DOID:1798;1.12e-07;1!DOID:1793;3.73e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.12e-07,1;DOID:10165,1.12e-07,1;DOID:1798,1.12e-07,1;DOID:1793,3.74e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003891;1.12e-13;4!UBERON:0003567;1.29e-12;2!UBERON:0003838;1.29e-12;2!UBERON:0003586;1.29e-12;2!UBERON:0005169;1.29e-12;2!UBERON:0002321;1.29e-12;2!UBERON:0005215;1.29e-12;2!UBERON:0002303;1.29e-12;2!UBERON:0002319;1.29e-12;2!UBERON:0000996;3.84e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003891,1.17e-13,4;UBERON:0003567,7.57e-13,2;UBERON:0003838,7.57e-13,2;UBERON:0003586,7.57e-13,2;UBERON:0005169,7.57e-13,2;UBERON:0002321,7.57e-13,2;UBERON:0005215,7.57e-13,2;UBERON:0002303,7.57e-13,2;UBERON:0002319,7.57e-13,2;UBERON:0000996,3.62e-07,1 | |||
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| |||
|short_description=p4@TFEB | |||
}} |
Revision as of 20:59, 13 September 2013
Short description: | p4@TFEB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TFEB_5end |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | 2bp_to_ENST00000358871, ENST00000403298, NM_001167827, uc003oqu.1_5end |
EntrezGene: | TFEB |
HGNC: | 11753 |
UniProt: | P19484B0QYS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.50e-14 | 7 |
germ cell | 2.50e-14 | 7 |
mesangial cell | 7.57e-13 | 2 |
kidney interstitial cell | 7.57e-13 | 2 |
juxtaglomerular complex cell | 7.57e-13 | 2 |
renal interstitial pericyte | 7.57e-13 | 2 |
extraglomerular mesangial cell | 7.57e-13 | 2 |
vein endothelial cell | 1.89e-09 | 6 |
endothelial cell of umbilical vein | 8.69e-09 | 3 |
epithelial cell of pancreas | 3.74e-07 | 4 |
pericyte cell | 7.64e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
stroma | 1.17e-13 | 4 |
abdomen connective tissue | 7.57e-13 | 2 |
abdominal segment connective tissue | 7.57e-13 | 2 |
trunk connective tissue | 7.57e-13 | 2 |
interstitial tissue | 7.57e-13 | 2 |
extraglomerular mesangium | 7.57e-13 | 2 |
kidney interstitium | 7.57e-13 | 2 |
juxtaglomerular apparatus | 7.57e-13 | 2 |
mesangium | 7.57e-13 | 2 |
vagina | 3.62e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.12e-07 | 1 |
endocrine pancreas cancer | 1.12e-07 | 1 |
pancreatic endocrine carcinoma | 1.12e-07 | 1 |
pancreatic cancer | 3.74e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.