FFCP PHASE1:Hg19::chr7:107332367..107332379,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5172|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8818|TSSclassifier=S|UniProt=|association_with_transcript=-11bp_to_ENST00000497446_5end|coexpression_cluster_id=C1151|description=CAGE_peak_3_at_SLC26A4_5end|id=chr7:107332367..107332379,+|ontology_enrichment_celltype=CL:0005020!7.93e-12!6;CL:0002138!7.93e-12!6;CL:0005022!7.93e-12!6;CL:0002139!1.04e-11!24;CL:0000115!3.11e-07!35|ontology_enrichment_celltype_v019=CL:0002144;9.09e-34;3!CL:0002139;5.74e-10;24!CL:0002564;1.41e-09;3|ontology_enrichment_celltype_v019_2=CL:0002144,9.10e-34,3;CL:0002139,5.92e-10,24;CL:0002564,1.10e-09,3;CL:0000115,7.68e-07,36|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.57e-12!115;UBERON:0002780!2.80e-10!41;UBERON:0001890!2.80e-10!41;UBERON:0006240!2.80e-10!41;UBERON:0003080!5.89e-10!42;UBERON:0002465!1.01e-09!10;UBERON:0001893!1.09e-09!34;UBERON:0001869!6.66e-09!32;UBERON:0001473!9.60e-09!8;UBERON:0004536!9.60e-09!8;UBERON:0006558!9.60e-09!8;UBERON:0000477!1.21e-08!286;UBERON:0002791!1.29e-08!33;UBERON:0002616!3.47e-08!59;UBERON:0004111!4.57e-08!241;UBERON:0001049!1.88e-07!57;UBERON:0005068!1.88e-07!57;UBERON:0006241!1.88e-07!57;UBERON:0007135!1.88e-07!57;UBERON:0000055!4.77e-07!69;UBERON:0002020!5.68e-07!34;UBERON:0003528!5.68e-07!34;UBERON:0003056!7.92e-07!61;UBERON:0000119!9.25e-07!312|ontology_enrichment_uberon_v019=UBERON:0010523;9.09e-34;3!UBERON:0001915;9.09e-34;3!UBERON:0001982;9.09e-34;3!UBERON:0002242;1.41e-09;3|ontology_enrichment_uberon_v019_2=UBERON:0010523,9.10e-34,3;UBERON:0001915,9.10e-34,3;UBERON:0001982,9.10e-34,3;UBERON:0002242,1.10e-09,3;UBERON:0003068,1.10e-09,3;UBERON:0002328,1.10e-09,3;UBERON:0004880,1.10e-09,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0.35576626268671,0.33472061276467,1.20848795132744,0,1.70843440283719,0.367663080345869,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0.49333509683432,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29929802984966,0.925971025153221,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89885516589815,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37041924646751,0.19871461170299,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0,1.10961172300523,8.90194124792919,0.50313580350515,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,1.60011105865261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.285906176706625,0,0,0.347716544605159,0,0,0,0,0,0.236664001461131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.476128862927481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0|short_description=p3@SLC26A4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5172 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8818 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_ENST00000497446_5end | |||
|coexpression_cluster_id=C1151 | |||
|description=CAGE_peak_3_at_SLC26A4_5end | |||
|id=chr7:107332367..107332379,+ | |||
|ontology_enrichment_celltype=CL:0005020!7.93e-12!6;CL:0002138!7.93e-12!6;CL:0005022!7.93e-12!6;CL:0002139!1.04e-11!24;CL:0000115!3.11e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002144;9.09e-34;3!CL:0002139;5.74e-10;24!CL:0002564;1.41e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,9.10e-34,3;CL:0002139,5.92e-10,24;CL:0002564,1.10e-09,3;CL:0000115,7.68e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.57e-12!115;UBERON:0002780!2.80e-10!41;UBERON:0001890!2.80e-10!41;UBERON:0006240!2.80e-10!41;UBERON:0003080!5.89e-10!42;UBERON:0002465!1.01e-09!10;UBERON:0001893!1.09e-09!34;UBERON:0001869!6.66e-09!32;UBERON:0001473!9.60e-09!8;UBERON:0004536!9.60e-09!8;UBERON:0006558!9.60e-09!8;UBERON:0000477!1.21e-08!286;UBERON:0002791!1.29e-08!33;UBERON:0002616!3.47e-08!59;UBERON:0004111!4.57e-08!241;UBERON:0001049!1.88e-07!57;UBERON:0005068!1.88e-07!57;UBERON:0006241!1.88e-07!57;UBERON:0007135!1.88e-07!57;UBERON:0000055!4.77e-07!69;UBERON:0002020!5.68e-07!34;UBERON:0003528!5.68e-07!34;UBERON:0003056!7.92e-07!61;UBERON:0000119!9.25e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;9.09e-34;3!UBERON:0001915;9.09e-34;3!UBERON:0001982;9.09e-34;3!UBERON:0002242;1.41e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,9.10e-34,3;UBERON:0001915,9.10e-34,3;UBERON:0001982,9.10e-34,3;UBERON:0002242,1.10e-09,3;UBERON:0003068,1.10e-09,3;UBERON:0002328,1.10e-09,3;UBERON:0004880,1.10e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0.35576626268671,0.33472061276467,1.20848795132744,0,1.70843440283719,0.367663080345869,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0.49333509683432,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29929802984966,0.925971025153221,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89885516589815,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37041924646751,0.19871461170299,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0,1.10961172300523,8.90194124792919,0.50313580350515,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,1.60011105865261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.285906176706625,0,0,0.347716544605159,0,0,0,0,0,0.236664001461131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.476128862927481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p3@SLC26A4 | |||
}} |
Revision as of 22:40, 13 September 2013
Short description: | p3@SLC26A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SLC26A4_5end |
Coexpression cluster: | C1151_mesenchymal_Fibroblast_Nucleus_fibrosarcoma_Lymphatic_Endothelial_anaplastic |
Association with transcript: | -11bp_to_ENST00000497446_5end |
EntrezGene: | SLC26A4 |
HGNC: | 8818 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 9.10e-34 | 3 |
endothelial cell of vascular tree | 5.92e-10 | 24 |
nucleus pulposus cell of intervertebral disc | 1.10e-09 | 3 |
endothelial cell | 7.68e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 9.10e-34 | 3 |
endothelium of capillary | 9.10e-34 | 3 |
capillary | 9.10e-34 | 3 |
nucleus pulposus | 1.10e-09 | 3 |
axial mesoderm | 1.10e-09 | 3 |
notochord | 1.10e-09 | 3 |
chordamesoderm | 1.10e-09 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.