FFCP PHASE1:Hg19::chr7:150065289..150065328,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29803|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17922|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000487455_5end|description=CAGE_peak_5_at_REPIN1_5end|id=chr7:150065289..150065328,+|ontology_enrichment_celltype=CL:0000037!3.75e-50!172;CL:0000566!3.75e-50!172;CL:0000988!6.67e-46!182;CL:0002032!1.22e-44!165;CL:0000837!1.22e-44!165;CL:0000738!9.88e-41!140;CL:0000763!3.37e-38!112;CL:0000049!3.37e-38!112;CL:0002087!5.22e-31!119;CL:0002031!3.75e-30!124;CL:0000766!1.95e-27!76;CL:0000557!6.63e-27!71;CL:0002009!9.60e-26!65;CL:0002194!2.89e-24!63;CL:0000576!2.89e-24!63;CL:0000040!2.89e-24!63;CL:0000559!2.89e-24!63;CL:0000839!3.72e-24!70;CL:0000860!4.06e-21!45;CL:0002057!2.61e-20!42;CL:0000451!5.57e-10!10;CL:0000990!3.30e-08!8;CL:0000945!9.04e-08!24;CL:0000826!9.04e-08!24;CL:0000134!1.01e-07!358;CL:0002393!2.22e-07!9;CL:0002397!2.22e-07!9;CL:0000542!5.18e-07!53;CL:0000051!5.18e-07!53;CL:0002320!6.90e-07!365|ontology_enrichment_celltype_v019=CL:0000451;5.22e-22;10!CL:0000990;1.28e-17;8!CL:0000576;3.21e-14;48!CL:0000860;3.90e-13;33!CL:0002057;3.90e-13;33!CL:0000766;1.60e-12;69!CL:0000840;2.66e-12;5!CL:0002393;1.01e-11;6!CL:0002397;1.01e-11;6!CL:0000763;4.40e-11;100!CL:0000453;8.67e-11;5!CL:0000738;2.73e-10;136!CL:0002087;2.92e-10;104!CL:0000473;3.50e-10;39!CL:0000234;3.50e-10;39!CL:0000945;1.11e-08;24!CL:0000988;1.48e-08;177!CL:0000784;2.39e-08;3!CL:0000236;1.09e-07;13!CL:0000767;4.00e-07;3!CL:0000094;9.93e-07;8|ontology_enrichment_celltype_v019_2=CL:0000037,3.54e-59,168;CL:0000988,3.76e-55,177;CL:0002032,1.76e-50,161;CL:0000837,1.76e-50,161;CL:0000738,2.48e-47,136;CL:0000763,4.08e-46,108;CL:0000049,4.08e-46,108;CL:0002087,2.18e-31,115;CL:0000766,1.73e-30,72;CL:0000557,2.12e-29,67;CL:0002031,2.31e-29,120;CL:0002009,5.25e-29,61;CL:0002194,4.09e-26,59;CL:0000576,4.09e-26,59;CL:0000040,4.09e-26,59;CL:0000559,4.09e-26,59;CL:0000860,6.03e-26,42;CL:0002057,6.03e-26,42;CL:0000839,4.44e-24,66;CL:0000473,9.21e-24,48;CL:0000234,9.21e-24,48;CL:0000451,2.03e-22,10;CL:0000134,2.09e-18,354;CL:0000990,5.03e-18,8;CL:0002320,1.15e-17,361;CL:0002393,5.54e-16,9;CL:0002397,5.54e-16,9;CL:0000219,4.52e-15,386;CL:0000034,2.30e-14,441;CL:0000048,3.01e-13,427;CL:0000723,8.64e-13,433;CL:0000840,1.57e-12,5;CL:0001029,1.57e-12,5;CL:0000453,5.18e-11,5;CL:0000945,9.75e-09,24;CL:0000826,9.75e-09,24;CL:0000784,2.41e-08,3;CL:0000767,2.52e-07,3;CL:0000236,4.42e-07,14;CL:0000094,6.67e-07,8|ontology_enrichment_development_v019=CL:0002057;1.29e-18;42!CL:0000049;6.58e-11;108|ontology_enrichment_disease=DOID:2531!2.05e-13!51;DOID:0060083!2.05e-13!51;DOID:1240!1.35e-10!39;DOID:8692!2.94e-08!31|ontology_enrichment_disease_v019=DOID:2531;1.72e-10;51!DOID:0060083;1.72e-10;51!DOID:1240;2.40e-10;39!DOID:8692;4.01e-07;31|ontology_enrichment_disease_v019_2=DOID:2531,4.57e-16,51;DOID:0060083,4.57e-16,51;DOID:1240,1.32e-11,39;DOID:8692,2.10e-07,31|ontology_enrichment_uberon=UBERON:0002390!3.51e-27!102;UBERON:0003061!3.51e-27!102;UBERON:0002193!3.45e-24!112;UBERON:0002371!1.38e-23!80;UBERON:0001474!7.93e-22!86;UBERON:0002405!1.45e-18!115;UBERON:0004765!1.61e-15!101;UBERON:0001434!1.61e-15!101;UBERON:0002384!9.96e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.52e-28,76;UBERON:0001474,1.77e-25,82;UBERON:0002390,1.93e-25,98;UBERON:0003061,1.93e-25,98;UBERON:0002405,3.14e-24,93;UBERON:0004765,2.79e-22,90;UBERON:0002193,5.17e-22,108;UBERON:0001434,5.14e-19,100;UBERON:0002384,1.17e-16,371;UBERON:0002204,1.42e-07,167;UBERON:0003081,2.39e-07,203|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0.204000691244253,0.940364164434263,0,0,0.125542639594803,0.229240217243854,0.164201178899891,0,1.96682138424452,3.45446458287491,3.71558695958582,0,0,0,2.01414721508784,2.41687695228617,15.5608232847469,2.76997704265939,1.40381113229099,4.34021741431704,0.895661896959697,1.29557466407592,0.257575567634187,1.01778767145695,0,0.727752183563449,0.232429036905685,1.23350366406548,1.54853185447552,0.575384784644301,1.2808035326455,0.236482229888585,3.44745680736619,4.51839278508678,8.12558919566051,0.376484679085209,0.272906150057846,0.674170453335254,0.612167784741805,1.60464513538047,1.27867425159808,0.329851300186716,0.199463657621632,0,3.48251086354301,2.26954089876456,3.73693349397345,0.502497330513487,0,0.868755378820466,5.44859552370032,3.31449872388808,4.74693581161327,1.05627643155971,1.27562579979026,1.67726916406701,1.68492946719743,1.80212271409808,0.16072558669708,1.14005097496499,1.19350006319454,1.0959849225878,0,0.546138611262131,0,3.41384178053206,1.20118796110804,0.574752439954483,0.661044872784862,0,11.9534723512984,10.5702694086769,12.9972897562578,13.2171328579026,2.80254281490768,4.74091352595139,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06976078313403,0.868946423296794,0,0,0.1278625618435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7,0.385870790539723,0.655678681511872,0.940634592723046,0,0.235676547101626,0,0,0,0,0.0939839179798536,0.45120521581504,0.89947040332436,0.178553938605658,0,0.561689566824178,0.730336388246517,0.458729283404541,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0.213233981900981,0,7.68608027048473,1.42771842880473,0.112131862580613,0.0636471582781649,0,0.217716747896961,0,0.26940821205835,0.215166616178029,0,0.162806537221949,0,0,0,0,0,0,0,0.805095174364105,0.320568492303233|short_description=p5@REPIN1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=29803 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17922 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000487455_5end | |||
|description=CAGE_peak_5_at_REPIN1_5end | |||
|id=chr7:150065289..150065328,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.75e-50!172;CL:0000566!3.75e-50!172;CL:0000988!6.67e-46!182;CL:0002032!1.22e-44!165;CL:0000837!1.22e-44!165;CL:0000738!9.88e-41!140;CL:0000763!3.37e-38!112;CL:0000049!3.37e-38!112;CL:0002087!5.22e-31!119;CL:0002031!3.75e-30!124;CL:0000766!1.95e-27!76;CL:0000557!6.63e-27!71;CL:0002009!9.60e-26!65;CL:0002194!2.89e-24!63;CL:0000576!2.89e-24!63;CL:0000040!2.89e-24!63;CL:0000559!2.89e-24!63;CL:0000839!3.72e-24!70;CL:0000860!4.06e-21!45;CL:0002057!2.61e-20!42;CL:0000451!5.57e-10!10;CL:0000990!3.30e-08!8;CL:0000945!9.04e-08!24;CL:0000826!9.04e-08!24;CL:0000134!1.01e-07!358;CL:0002393!2.22e-07!9;CL:0002397!2.22e-07!9;CL:0000542!5.18e-07!53;CL:0000051!5.18e-07!53;CL:0002320!6.90e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000451;5.22e-22;10!CL:0000990;1.28e-17;8!CL:0000576;3.21e-14;48!CL:0000860;3.90e-13;33!CL:0002057;3.90e-13;33!CL:0000766;1.60e-12;69!CL:0000840;2.66e-12;5!CL:0002393;1.01e-11;6!CL:0002397;1.01e-11;6!CL:0000763;4.40e-11;100!CL:0000453;8.67e-11;5!CL:0000738;2.73e-10;136!CL:0002087;2.92e-10;104!CL:0000473;3.50e-10;39!CL:0000234;3.50e-10;39!CL:0000945;1.11e-08;24!CL:0000988;1.48e-08;177!CL:0000784;2.39e-08;3!CL:0000236;1.09e-07;13!CL:0000767;4.00e-07;3!CL:0000094;9.93e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.54e-59,168;CL:0000988,3.76e-55,177;CL:0002032,1.76e-50,161;CL:0000837,1.76e-50,161;CL:0000738,2.48e-47,136;CL:0000763,4.08e-46,108;CL:0000049,4.08e-46,108;CL:0002087,2.18e-31,115;CL:0000766,1.73e-30,72;CL:0000557,2.12e-29,67;CL:0002031,2.31e-29,120;CL:0002009,5.25e-29,61;CL:0002194,4.09e-26,59;CL:0000576,4.09e-26,59;CL:0000040,4.09e-26,59;CL:0000559,4.09e-26,59;CL:0000860,6.03e-26,42;CL:0002057,6.03e-26,42;CL:0000839,4.44e-24,66;CL:0000473,9.21e-24,48;CL:0000234,9.21e-24,48;CL:0000451,2.03e-22,10;CL:0000134,2.09e-18,354;CL:0000990,5.03e-18,8;CL:0002320,1.15e-17,361;CL:0002393,5.54e-16,9;CL:0002397,5.54e-16,9;CL:0000219,4.52e-15,386;CL:0000034,2.30e-14,441;CL:0000048,3.01e-13,427;CL:0000723,8.64e-13,433;CL:0000840,1.57e-12,5;CL:0001029,1.57e-12,5;CL:0000453,5.18e-11,5;CL:0000945,9.75e-09,24;CL:0000826,9.75e-09,24;CL:0000784,2.41e-08,3;CL:0000767,2.52e-07,3;CL:0000236,4.42e-07,14;CL:0000094,6.67e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.29e-18;42!CL:0000049;6.58e-11;108 | |||
|ontology_enrichment_disease=DOID:2531!2.05e-13!51;DOID:0060083!2.05e-13!51;DOID:1240!1.35e-10!39;DOID:8692!2.94e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;1.72e-10;51!DOID:0060083;1.72e-10;51!DOID:1240;2.40e-10;39!DOID:8692;4.01e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.57e-16,51;DOID:0060083,4.57e-16,51;DOID:1240,1.32e-11,39;DOID:8692,2.10e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.51e-27!102;UBERON:0003061!3.51e-27!102;UBERON:0002193!3.45e-24!112;UBERON:0002371!1.38e-23!80;UBERON:0001474!7.93e-22!86;UBERON:0002405!1.45e-18!115;UBERON:0004765!1.61e-15!101;UBERON:0001434!1.61e-15!101;UBERON:0002384!9.96e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.52e-28,76;UBERON:0001474,1.77e-25,82;UBERON:0002390,1.93e-25,98;UBERON:0003061,1.93e-25,98;UBERON:0002405,3.14e-24,93;UBERON:0004765,2.79e-22,90;UBERON:0002193,5.17e-22,108;UBERON:0001434,5.14e-19,100;UBERON:0002384,1.17e-16,371;UBERON:0002204,1.42e-07,167;UBERON:0003081,2.39e-07,203 | |||
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| |||
|short_description=p5@REPIN1 | |||
}} |
Revision as of 23:54, 13 September 2013
Short description: | p5@REPIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_REPIN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000487455_5end |
EntrezGene: | REPIN1 |
HGNC: | 17922 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.52e-28 | 76 |
bone element | 1.77e-25 | 82 |
hematopoietic system | 1.93e-25 | 98 |
blood island | 1.93e-25 | 98 |
immune system | 3.14e-24 | 93 |
skeletal element | 2.79e-22 | 90 |
hemolymphoid system | 5.17e-22 | 108 |
skeletal system | 5.14e-19 | 100 |
connective tissue | 1.17e-16 | 371 |
musculoskeletal system | 1.42e-07 | 167 |
lateral plate mesoderm | 2.39e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.57e-16 | 51 |
immune system cancer | 4.57e-16 | 51 |
leukemia | 1.32e-11 | 39 |
myeloid leukemia | 2.10e-07 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.