FFCP PHASE1:Hg19::chr8:22785359..22785366,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=157310|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28319|TSSclassifier=S|UniProt=Q96S96|association_with_transcript=54bp_to_ENST00000256404,NM_144962,uc003xcn.1_5end|coexpression_cluster_id=C410|description=CAGE_peak_8_at_PEBP4_5end|id=chr8:22785359..22785366,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010226;5.11e-17;1!UBERON:0000358;8.18e-17;1!UBERON:0010227;1.78e-16;1!UBERON:0004874;1.78e-16;1|ontology_enrichment_disease=DOID:114!1.68e-10!2|ontology_enrichment_disease_v019=DOID:114;4.04e-31;2!DOID:178;1.78e-16;1!DOID:326;1.78e-16;1!DOID:3978;1.78e-16;1!DOID:3394;1.78e-16;1!DOID:5844;1.78e-16;1!DOID:1287;4.18e-16;4|ontology_enrichment_disease_v019_2=DOID:114,2.18e-31,2;DOID:178,1.21e-16,1;DOID:326,1.21e-16,1;DOID:3978,1.21e-16,1;DOID:3394,1.21e-16,1;DOID:5844,1.21e-16,1;DOID:1287,3.07e-16,4|ontology_enrichment_uberon=UBERON:0007023!2.18e-39!115;UBERON:0000988!1.24e-13!3;UBERON:0002298!2.48e-13!8;UBERON:0003075!8.69e-12!86;UBERON:0007284!8.69e-12!86;UBERON:0001049!2.83e-11!57;UBERON:0005068!2.83e-11!57;UBERON:0006241!2.83e-11!57;UBERON:0007135!2.83e-11!57;UBERON:0002346!4.29e-11!90;UBERON:0000341!5.50e-10!2;UBERON:0003076!8.45e-10!15;UBERON:0003057!8.45e-10!15;UBERON:0007100!1.09e-09!27;UBERON:0002148!1.28e-09!2;UBERON:0009662!1.28e-09!2;UBERON:0002616!3.38e-09!59;UBERON:0004733!8.38e-09!12;UBERON:0002028!8.38e-09!12;UBERON:0007277!8.38e-09!12;UBERON:0005743!9.35e-09!86;UBERON:0000153!1.47e-08!129;UBERON:0007811!1.47e-08!129;UBERON:0003103!2.43e-08!69;UBERON:0004732!4.18e-08!13;UBERON:0001017!4.98e-08!82;UBERON:0004121!5.47e-08!169;UBERON:0002308!8.03e-08!9;UBERON:0000125!8.03e-08!9;UBERON:0004111!8.25e-08!241;UBERON:0000924!1.08e-07!173;UBERON:0006601!1.08e-07!173;UBERON:0000073!1.23e-07!94;UBERON:0001016!1.23e-07!94;UBERON:0000955!2.25e-07!69;UBERON:0006238!2.25e-07!69;UBERON:0000025!2.25e-07!194;UBERON:0004151!2.67e-07!3;UBERON:0003978!3.51e-07!3;UBERON:0009751!3.51e-07!3;UBERON:0000946!3.51e-07!3;UBERON:0002523!3.51e-07!3;UBERON:0005983!3.51e-07!3;UBERON:0002165!3.51e-07!3;UBERON:0002062!3.51e-07!3;UBERON:0007280!3.51e-07!3;UBERON:0001723!3.95e-07!3;UBERON:0001033!3.95e-07!3;UBERON:0010056!3.95e-07!3;UBERON:0000033!4.49e-07!123;UBERON:0000477!5.71e-07!286|ontology_enrichment_uberon_v019=UBERON:0004151;1.76e-21;3!UBERON:0002084;5.11e-17;1!UBERON:0002082;5.11e-17;1!UBERON:0002146;8.18e-17;1!UBERON:0005623;8.18e-17;1!UBERON:0002079;1.78e-16;1!UBERON:0000989;1.78e-16;1!UBERON:0002171;1.78e-16;1!UBERON:0008811;1.78e-16;1!UBERON:0006518;1.78e-16;1!UBERON:0008949;1.78e-16;1!UBERON:0000101;1.78e-16;1!UBERON:0002167;1.78e-16;1!UBERON:0007100;2.48e-15;25!UBERON:0000341;6.67e-09;2!UBERON:0002081;6.67e-09;2!UBERON:0000948;6.68e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.96e-21,3;UBERON:0002084,4.72e-17,1;UBERON:0002082,4.72e-17,1;UBERON:0010226,4.72e-17,1;UBERON:0002146,8.86e-17,1;UBERON:0005623,8.86e-17,1;UBERON:0002171,1.65e-16,1;UBERON:0006518,1.65e-16,1;UBERON:0008949,1.65e-16,1;UBERON:0000101,1.65e-16,1;UBERON:0002167,1.65e-16,1;UBERON:0000989,1.93e-16,1;UBERON:0008811,1.93e-16,1;UBERON:0006258,1.93e-16,1;UBERON:0005876,1.93e-16,1;UBERON:0004874,1.93e-16,1;UBERON:0002079,2.25e-16,1;UBERON:0007023,3.62e-15,114;UBERON:0007100,3.13e-14,27;UBERON:0002081,7.49e-09,2;UBERON:0010227,7.49e-09,2;UBERON:0000341,8.74e-09,2;UBERON:0003103,6.66e-08,68|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.837847203816763,2.29160424011684,0,1.79711100449092,1.71690419254628,0.446342914883745,0.134366944973453,0,0,0,0,0,0,0,0,0.136203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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=157310 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28319 | |||
|TSSclassifier=S | |||
|UniProt=Q96S96 | |||
|association_with_transcript=54bp_to_ENST00000256404,NM_144962,uc003xcn.1_5end | |||
|coexpression_cluster_id=C410 | |||
|description=CAGE_peak_8_at_PEBP4_5end | |||
|id=chr8:22785359..22785366,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;5.11e-17;1!UBERON:0000358;8.18e-17;1!UBERON:0010227;1.78e-16;1!UBERON:0004874;1.78e-16;1 | |||
|ontology_enrichment_disease=DOID:114!1.68e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:114;4.04e-31;2!DOID:178;1.78e-16;1!DOID:326;1.78e-16;1!DOID:3978;1.78e-16;1!DOID:3394;1.78e-16;1!DOID:5844;1.78e-16;1!DOID:1287;4.18e-16;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.18e-31,2;DOID:178,1.21e-16,1;DOID:326,1.21e-16,1;DOID:3978,1.21e-16,1;DOID:3394,1.21e-16,1;DOID:5844,1.21e-16,1;DOID:1287,3.07e-16,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.18e-39!115;UBERON:0000988!1.24e-13!3;UBERON:0002298!2.48e-13!8;UBERON:0003075!8.69e-12!86;UBERON:0007284!8.69e-12!86;UBERON:0001049!2.83e-11!57;UBERON:0005068!2.83e-11!57;UBERON:0006241!2.83e-11!57;UBERON:0007135!2.83e-11!57;UBERON:0002346!4.29e-11!90;UBERON:0000341!5.50e-10!2;UBERON:0003076!8.45e-10!15;UBERON:0003057!8.45e-10!15;UBERON:0007100!1.09e-09!27;UBERON:0002148!1.28e-09!2;UBERON:0009662!1.28e-09!2;UBERON:0002616!3.38e-09!59;UBERON:0004733!8.38e-09!12;UBERON:0002028!8.38e-09!12;UBERON:0007277!8.38e-09!12;UBERON:0005743!9.35e-09!86;UBERON:0000153!1.47e-08!129;UBERON:0007811!1.47e-08!129;UBERON:0003103!2.43e-08!69;UBERON:0004732!4.18e-08!13;UBERON:0001017!4.98e-08!82;UBERON:0004121!5.47e-08!169;UBERON:0002308!8.03e-08!9;UBERON:0000125!8.03e-08!9;UBERON:0004111!8.25e-08!241;UBERON:0000924!1.08e-07!173;UBERON:0006601!1.08e-07!173;UBERON:0000073!1.23e-07!94;UBERON:0001016!1.23e-07!94;UBERON:0000955!2.25e-07!69;UBERON:0006238!2.25e-07!69;UBERON:0000025!2.25e-07!194;UBERON:0004151!2.67e-07!3;UBERON:0003978!3.51e-07!3;UBERON:0009751!3.51e-07!3;UBERON:0000946!3.51e-07!3;UBERON:0002523!3.51e-07!3;UBERON:0005983!3.51e-07!3;UBERON:0002165!3.51e-07!3;UBERON:0002062!3.51e-07!3;UBERON:0007280!3.51e-07!3;UBERON:0001723!3.95e-07!3;UBERON:0001033!3.95e-07!3;UBERON:0010056!3.95e-07!3;UBERON:0000033!4.49e-07!123;UBERON:0000477!5.71e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;1.76e-21;3!UBERON:0002084;5.11e-17;1!UBERON:0002082;5.11e-17;1!UBERON:0002146;8.18e-17;1!UBERON:0005623;8.18e-17;1!UBERON:0002079;1.78e-16;1!UBERON:0000989;1.78e-16;1!UBERON:0002171;1.78e-16;1!UBERON:0008811;1.78e-16;1!UBERON:0006518;1.78e-16;1!UBERON:0008949;1.78e-16;1!UBERON:0000101;1.78e-16;1!UBERON:0002167;1.78e-16;1!UBERON:0007100;2.48e-15;25!UBERON:0000341;6.67e-09;2!UBERON:0002081;6.67e-09;2!UBERON:0000948;6.68e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.96e-21,3;UBERON:0002084,4.72e-17,1;UBERON:0002082,4.72e-17,1;UBERON:0010226,4.72e-17,1;UBERON:0002146,8.86e-17,1;UBERON:0005623,8.86e-17,1;UBERON:0002171,1.65e-16,1;UBERON:0006518,1.65e-16,1;UBERON:0008949,1.65e-16,1;UBERON:0000101,1.65e-16,1;UBERON:0002167,1.65e-16,1;UBERON:0000989,1.93e-16,1;UBERON:0008811,1.93e-16,1;UBERON:0006258,1.93e-16,1;UBERON:0005876,1.93e-16,1;UBERON:0004874,1.93e-16,1;UBERON:0002079,2.25e-16,1;UBERON:0007023,3.62e-15,114;UBERON:0007100,3.13e-14,27;UBERON:0002081,7.49e-09,2;UBERON:0010227,7.49e-09,2;UBERON:0000341,8.74e-09,2;UBERON:0003103,6.66e-08,68 | |||
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|short_description=p8@PEBP4 | |||
}} |
Revision as of 04:40, 14 September 2013
Short description: | p8@PEBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_PEBP4_5end |
Coexpression cluster: | C410_skeletal_left_heart_penis_diaphragm_throat_tongue |
Association with transcript: | 54bp_to_ENST00000256404, NM_144962, uc003xcn.1_5end |
EntrezGene: | PEBP4 |
HGNC: | 28319 |
UniProt: | Q96S96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 1.96e-21 | 3 |
heart left ventricle | 4.72e-17 | 1 |
cardiac ventricle | 4.72e-17 | 1 |
future cardiac ventricle | 4.72e-17 | 1 |
pulmonary valve | 8.86e-17 | 1 |
semi-lunar valve | 8.86e-17 | 1 |
lower lobe of right lung | 1.65e-16 | 1 |
right lung lobe | 1.65e-16 | 1 |
lower lobe of lung | 1.65e-16 | 1 |
lobe of lung | 1.65e-16 | 1 |
right lung | 1.65e-16 | 1 |
penis | 1.93e-16 | 1 |
intromittent organ | 1.93e-16 | 1 |
lateral plate mesenchyme | 1.93e-16 | 1 |
undifferentiated genital tubercle | 1.93e-16 | 1 |
somatopleure | 1.93e-16 | 1 |
left cardiac atrium | 2.25e-16 | 1 |
adult organism | 3.62e-15 | 114 |
primary circulatory organ | 3.13e-14 | 27 |
cardiac atrium | 7.49e-09 | 2 |
future cardiac atrium | 7.49e-09 | 2 |
throat | 8.74e-09 | 2 |
compound organ | 6.66e-08 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.18e-31 | 2 |
vascular disease | 1.21e-16 | 1 |
ischemia | 1.21e-16 | 1 |
extrinsic cardiomyopathy | 1.21e-16 | 1 |
myocardial ischemia | 1.21e-16 | 1 |
myocardial infarction | 1.21e-16 | 1 |
cardiovascular system disease | 3.07e-16 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.