FFCP PHASE1:Hg19::chr8:57353666..57353675,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C309|description=CAGE_peak_at_chr8:57353666..57353675,-|id=chr8:57353666..57353675,-|ontology_enrichment_celltype=CL:0000153!3.79e-11!9;CL:0000447!3.79e-11!9;CL:0000667!5.47e-10!6;CL:0000058!5.47e-10!6;CL:0000138!5.47e-10!6;CL:0002540!1.68e-09!6;CL:0000135!4.25e-09!3;CL:0000386!4.25e-09!3;CL:0000388!4.25e-09!3;CL:0000499!1.24e-07!27;CL:0000327!3.43e-07!14|ontology_enrichment_celltype_v019=CL:0000138;3.55e-27;6!CL:0000153;1.61e-18;9!CL:0000447;1.61e-18;9!CL:0000327;1.49e-11;15|ontology_enrichment_celltype_v019_2=CL:0000058,3.55e-27,6;CL:0000138,3.55e-27,6;CL:0000153,1.61e-18,9;CL:0000447,1.61e-18,9;CL:0000327,1.50e-11,15|ontology_enrichment_development_v019=UBERON:0010122;3.49e-79;2!UBERON:0003099;6.62e-41;1!UBERON:0003852;6.62e-41;1!UBERON:0005062;2.53e-11;4!UBERON:0007284;2.53e-11;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000369!1.72e-24!4;UBERON:0002435!1.72e-24!4;UBERON:0000204!1.72e-24!4;UBERON:0010082!1.72e-24!4;UBERON:0002308!2.22e-23!9;UBERON:0000125!2.22e-23!9;UBERON:0002420!3.28e-23!9;UBERON:0007245!3.28e-23!9;UBERON:0010009!3.28e-23!9;UBERON:0010011!3.28e-23!9;UBERON:0000454!3.28e-23!9;UBERON:0009663!3.23e-21!7;UBERON:0005383!2.40e-19!3;UBERON:0005382!2.40e-19!3;UBERON:0001873!1.15e-13!2;UBERON:0010122!1.15e-13!2;UBERON:0001897!8.53e-13!2;UBERON:0001049!2.67e-12!57;UBERON:0005068!2.67e-12!57;UBERON:0006241!2.67e-12!57;UBERON:0007135!2.67e-12!57;UBERON:0002346!2.44e-11!90;UBERON:0001017!7.29e-11!82;UBERON:0000073!1.47e-10!94;UBERON:0001016!1.47e-10!94;UBERON:0003075!2.57e-10!86;UBERON:0007284!2.57e-10!86;UBERON:0005743!3.04e-10!86;UBERON:0002780!6.36e-10!41;UBERON:0001890!6.36e-10!41;UBERON:0006240!6.36e-10!41;UBERON:0003080!1.17e-09!42;UBERON:0002020!1.17e-09!34;UBERON:0003528!1.17e-09!34;UBERON:0000043!4.25e-09!3;UBERON:0002240!8.36e-09!3;UBERON:0002616!4.39e-08!59;UBERON:0000924!4.92e-08!173;UBERON:0006601!4.92e-08!173;UBERON:0001869!6.09e-08!32;UBERON:0005705!9.91e-08!1;UBERON:0008193!9.91e-08!1;UBERON:0002514!9.91e-08!1;UBERON:0003462!9.91e-08!1;UBERON:0008001!9.91e-08!1;UBERON:0007914!9.91e-08!1;UBERON:0003457!9.91e-08!1;UBERON:0009292!9.91e-08!1;UBERON:0007375!9.91e-08!1;UBERON:0003323!9.91e-08!1;UBERON:0002397!9.91e-08!1;UBERON:0001709!9.91e-08!1;UBERON:0004066!9.91e-08!1;UBERON:0002244!9.91e-08!1;UBERON:0005620!9.91e-08!1;UBERON:0004068!9.91e-08!1;UBERON:0004362!9.91e-08!1;UBERON:0003056!1.02e-07!61;UBERON:0002791!1.11e-07!33;UBERON:0001893!1.94e-07!34;UBERON:0001874!2.09e-07!1;UBERON:0004121!2.78e-07!169;UBERON:0001882!6.97e-07!1;UBERON:0005403!6.97e-07!1;UBERON:0002363!7.40e-07!1;UBERON:0007647!7.40e-07!1;UBERON:0010115!7.40e-07!1|ontology_enrichment_uberon_v019=UBERON:0001873;3.49e-79;2!UBERON:0005383;2.87e-53;3!UBERON:0005382;2.87e-53;3!UBERON:0005705;6.62e-41;1!UBERON:0008193;6.62e-41;1!UBERON:0010912;6.62e-41;1!UBERON:0002514;6.62e-41;1!UBERON:0003457;6.62e-41;1!UBERON:0008907;6.62e-41;1!UBERON:0008001;6.62e-41;1!UBERON:0007213;6.62e-41;1!UBERON:0009891;6.62e-41;1!UBERON:0007914;6.62e-41;1!UBERON:0007375;6.62e-41;1!UBERON:0003323;6.62e-41;1!UBERON:0010258;6.62e-41;1!UBERON:0005253;6.62e-41;1!UBERON:0007842;6.62e-41;1!UBERON:0002397;6.62e-41;1!UBERON:0003113;6.62e-41;1!UBERON:0003277;6.62e-41;1!UBERON:0001709;6.62e-41;1!UBERON:0002244;6.62e-41;1!UBERON:0005620;6.62e-41;1!UBERON:0010364;6.62e-41;1!UBERON:0004288;6.62e-41;1!UBERON:0000369;2.71e-40;4!UBERON:0002435;2.71e-40;4!UBERON:0000204;2.71e-40;4!UBERON:0009663;1.44e-23;7!UBERON:0004089;3.11e-21;2!UBERON:0002420;1.35e-18;9!UBERON:0000125;1.35e-18;9!UBERON:0007245;1.35e-18;9!UBERON:0002308;1.35e-18;9!UBERON:0010009;1.35e-18;9!UBERON:0010011;1.35e-18;9!UBERON:0000454;1.35e-18;9!UBERON:0001708;2.53e-11;4!UBERON:0008895;2.53e-11;4!UBERON:0011159;2.53e-09;5!UBERON:0003104;5.08e-07;7!UBERON:0009142;5.08e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0001873,3.49e-79,2;UBERON:0010122,3.49e-79,2;UBERON:0005383,2.87e-53,3;UBERON:0005382,2.87e-53,3;UBERON:0005705,6.62e-41,1;UBERON:0008193,6.62e-41,1;UBERON:0010912,6.62e-41,1;UBERON:0002514,6.62e-41,1;UBERON:0003457,6.62e-41,1;UBERON:0008907,6.62e-41,1;UBERON:0008001,6.62e-41,1;UBERON:0007213,6.62e-41,1;UBERON:0009891,6.62e-41,1;UBERON:0007914,6.62e-41,1;UBERON:0009292,6.62e-41,1;UBERON:0003099,6.62e-41,1;UBERON:0007375,6.62e-41,1;UBERON:0003323,6.62e-41,1;UBERON:0010258,6.62e-41,1;UBERON:0007842,6.62e-41,1;UBERON:0009494,6.62e-41,1;UBERON:0010042,6.62e-41,1;UBERON:0010045,6.62e-41,1;UBERON:0010259,6.62e-41,1;UBERON:0010359,6.62e-41,1;UBERON:0009526,6.62e-41,1;UBERON:0002397,6.62e-41,1;UBERON:0003113,6.62e-41,1;UBERON:0003277,6.62e-41,1;UBERON:0001709,6.62e-41,1;UBERON:0004066,6.62e-41,1;UBERON:0002244,6.62e-41,1;UBERON:0005620,6.62e-41,1;UBERON:0004362,6.62e-41,1;UBERON:0010364,6.62e-41,1;UBE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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C309 | |||
|description=CAGE_peak_at_chr8:57353666..57353675,- | |||
|id=chr8:57353666..57353675,- | |||
|ontology_enrichment_celltype=CL:0000153!3.79e-11!9;CL:0000447!3.79e-11!9;CL:0000667!5.47e-10!6;CL:0000058!5.47e-10!6;CL:0000138!5.47e-10!6;CL:0002540!1.68e-09!6;CL:0000135!4.25e-09!3;CL:0000386!4.25e-09!3;CL:0000388!4.25e-09!3;CL:0000499!1.24e-07!27;CL:0000327!3.43e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000138;3.55e-27;6!CL:0000153;1.61e-18;9!CL:0000447;1.61e-18;9!CL:0000327;1.49e-11;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,3.55e-27,6;CL:0000138,3.55e-27,6;CL:0000153,1.61e-18,9;CL:0000447,1.61e-18,9;CL:0000327,1.50e-11,15 | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.49e-79;2!UBERON:0003099;6.62e-41;1!UBERON:0003852;6.62e-41;1!UBERON:0005062;2.53e-11;4!UBERON:0007284;2.53e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr8:57353666..57353675,- | |||
}} |
Revision as of 05:36, 14 September 2013
Short description: | p@chr8:57353666..57353675, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:57353666..57353675, - |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 3.55e-27 | 6 |
chondrocyte | 3.55e-27 | 6 |
GAG secreting cell | 1.61e-18 | 9 |
carbohydrate secreting cell | 1.61e-18 | 9 |
extracellular matrix secreting cell | 1.50e-11 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.