FFCP PHASE1:Hg19::chr10:12237820..12237834,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11164 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8052 | |||
|TSSclassifier=strong | |||
|UniProt=A6NCQ0,A6NFX8 | |||
|association_with_transcript=0bp_to_ENST00000378927,ENST00000378937_5end | |||
|description=CAGE_peak_2_at_NUDT5_5end | |||
|id=chr10:12237820..12237834,- | |||
|ontology_enrichment_celltype=CL:0000548!1.17e-23!679;CL:0000004!1.17e-23!679;CL:0000255!1.17e-23!679;CL:0000012!1.02e-22!682;CL:0000055!1.62e-22!180;CL:0000003!3.66e-20!722;CL:0000144!1.50e-17!625;CL:0000220!3.24e-16!246;CL:0002321!6.06e-16!248;CL:0000222!1.43e-13!119;CL:0002371!2.59e-13!591;CL:0000057!1.45e-11!75;CL:0000680!2.41e-10!57;CL:0000056!2.41e-10!57;CL:0000355!2.41e-10!57;CL:0000187!1.85e-09!54;CL:0000393!1.06e-08!60;CL:0000211!1.06e-08!60;CL:0000723!5.12e-08!436;CL:0000183!6.77e-08!59;CL:0000048!8.95e-08!430;CL:0000063!2.75e-07!578;CL:0000034!3.29e-07!444;CL:0000192!3.54e-07!42;CL:0000514!3.54e-07!42;CL:0000077!9.43e-07!19 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.82e-16,250;CL:0000222,8.57e-14,121;CL:0000057,1.59e-11,76;CL:0000680,8.09e-11,58;CL:0000056,8.09e-11,58;CL:0000355,8.09e-11,58;CL:0000187,6.47e-10,55;CL:0000393,5.17e-09,61;CL:0000211,5.17e-09,61;CL:0000723,1.30e-08,433;CL:0000048,2.32e-08,427;CL:0000034,8.54e-08,441;CL:0000192,1.35e-07,43;CL:0000514,1.35e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.40e-10!83;UBERON:0002329!3.40e-10!83;UBERON:0003077!3.40e-10!83;UBERON:0003059!3.40e-10!83;UBERON:0007282!3.40e-10!83;UBERON:0009618!3.40e-10!83;UBERON:0007285!3.40e-10!83;UBERON:0000490!4.66e-09!138;UBERON:0000486!5.49e-09!82;UBERON:0004290!1.47e-08!70;UBERON:0001134!1.75e-08!61;UBERON:0002036!1.75e-08!61;UBERON:0003082!1.75e-08!61;UBERON:0002385!9.22e-08!63;UBERON:0001015!9.22e-08!63;UBERON:0000383!9.22e-08!63;UBERON:0002049!2.44e-07!79;UBERON:0007798!2.44e-07!79 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,1.02e-09,148;UBERON:0000486,1.50e-09,83;UBERON:0002329,4.82e-09,71;UBERON:0003059,4.82e-09,71;UBERON:0007282,4.82e-09,71;UBERON:0004290,4.82e-09,71;UBERON:0009618,4.82e-09,71;UBERON:0001134,6.83e-09,62;UBERON:0002036,6.83e-09,62;UBERON:0003082,6.83e-09,62;UBERON:0007524,7.17e-09,73;UBERON:0003077,7.23e-09,72;UBERON:0007285,7.23e-09,72;UBERON:0002385,3.85e-08,64;UBERON:0001015,3.85e-08,64;UBERON:0000383,3.85e-08,64;UBERON:0007503,8.93e-08,78;UBERON:0002049,3.12e-07,78;UBERON:0007798,3.12e-07,78 | |||
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| |||
|short_description=p2@NUDT5 | |||
}} |
Revision as of 01:44, 11 January 2014
Short description: | p2@NUDT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NUDT5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000378927, ENST00000378937_5end |
EntrezGene: | NUDT5 |
HGNC: | 8052 |
UniProt: | A6NCQ0A6NFX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.82e-16 | 250 |
mesodermal cell | 8.57e-14 | 121 |
fibroblast | 1.59e-11 | 76 |
muscle precursor cell | 8.09e-11 | 58 |
myoblast | 8.09e-11 | 58 |
multi-potent skeletal muscle stem cell | 8.09e-11 | 58 |
muscle cell | 6.47e-10 | 55 |
electrically responsive cell | 5.17e-09 | 61 |
electrically active cell | 5.17e-09 | 61 |
somatic stem cell | 1.30e-08 | 433 |
multi fate stem cell | 2.32e-08 | 427 |
stem cell | 8.54e-08 | 441 |
smooth muscle cell | 1.35e-07 | 43 |
smooth muscle myoblast | 1.35e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 1.02e-09 | 148 |
multilaminar epithelium | 1.50e-09 | 83 |
somite | 4.82e-09 | 71 |
presomitic mesoderm | 4.82e-09 | 71 |
presumptive segmental plate | 4.82e-09 | 71 |
dermomyotome | 4.82e-09 | 71 |
trunk paraxial mesoderm | 4.82e-09 | 71 |
skeletal muscle tissue | 6.83e-09 | 62 |
striated muscle tissue | 6.83e-09 | 62 |
myotome | 6.83e-09 | 62 |
dense mesenchyme tissue | 7.17e-09 | 73 |
paraxial mesoderm | 7.23e-09 | 72 |
presumptive paraxial mesoderm | 7.23e-09 | 72 |
muscle tissue | 3.85e-08 | 64 |
musculature | 3.85e-08 | 64 |
musculature of body | 3.85e-08 | 64 |
epithelial vesicle | 8.93e-08 | 78 |
vasculature | 3.12e-07 | 78 |
vascular system | 3.12e-07 | 78 |