FFCP PHASE1:Hg19::chr10:29923838..29923849,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6840 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11480 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=32bp_to_uc001iuv.1_5end | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_8_at_SVIL_5end | |||
|id=chr10:29923838..29923849,- | |||
|ontology_enrichment_celltype=CL:0000359!5.92e-09!32;CL:0000680!4.45e-08!57;CL:0000056!4.45e-08!57;CL:0000355!4.45e-08!57;CL:0000187!2.24e-07!54 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;6.15e-09;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!2.93e-11!63;UBERON:0001015!2.93e-11!63;UBERON:0000383!2.93e-11!63;UBERON:0000468!4.98e-11!659;UBERON:0001134!2.73e-10!61;UBERON:0002036!2.73e-10!61;UBERON:0003082!2.73e-10!61;UBERON:0000486!5.71e-10!82;UBERON:0004290!1.60e-09!70;UBERON:0000914!2.52e-09!83;UBERON:0002329!2.52e-09!83;UBERON:0003077!2.52e-09!83;UBERON:0003059!2.52e-09!83;UBERON:0007282!2.52e-09!83;UBERON:0009618!2.52e-09!83;UBERON:0007285!2.52e-09!83;UBERON:0000922!1.60e-08!612;UBERON:0000467!2.78e-08!625;UBERON:0000480!3.72e-08!626;UBERON:0000926!6.14e-08!448;UBERON:0004120!6.14e-08!448;UBERON:0006603!6.14e-08!448;UBERON:0002050!7.64e-08!605;UBERON:0005423!7.64e-08!605;UBERON:0000481!8.25e-08!347;UBERON:0000923!1.28e-07!604;UBERON:0005291!1.28e-07!604;UBERON:0006598!1.28e-07!604;UBERON:0002532!1.28e-07!604;UBERON:0007100!5.88e-07!27;UBERON:0007023!9.47e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.25e-09;25!UBERON:0001044;2.80e-09;6!UBERON:0003293;2.80e-09;6!UBERON:0003294;2.80e-09;6!UBERON:0010047;2.80e-09;6!UBERON:0003408;2.80e-09;6!UBERON:0000167;2.80e-09;6!UBERON:0004921;2.55e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.30e-11,114;UBERON:0000923,3.07e-10,560;UBERON:0010316,3.07e-10,560;UBERON:0005291,3.07e-10,560;UBERON:0006598,3.07e-10,560;UBERON:0010317,3.07e-10,560;UBERON:0002532,3.07e-10,560;UBERON:0002050,5.87e-10,564;UBERON:0000926,8.00e-10,315;UBERON:0004120,8.00e-10,315;UBERON:0006603,8.00e-10,315;UBERON:0000922,3.56e-09,592;UBERON:0001044,4.01e-09,6;UBERON:0003293,4.01e-09,6;UBERON:0003294,4.01e-09,6;UBERON:0010047,4.01e-09,6;UBERON:0000167,4.01e-09,6;UBERON:0005423,8.23e-09,581;UBERON:0004872,9.64e-09,83;UBERON:0003133,2.04e-08,48;UBERON:0007100,2.39e-08,27;UBERON:0004797,5.79e-08,7;UBERON:0007500,2.41e-07,59;UBERON:0001981,2.41e-07,59;UBERON:0004537,2.41e-07,59;UBERON:0006965,2.41e-07,59;UBERON:0001637,5.52e-07,42;UBERON:0003509,5.52e-07,42;UBERON:0004572,5.52e-07,42 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,2.52687949370732,0,0,0,0,0,0.495065411840187,0.662794751455832,0.672325146451775,0.602694528023977,1.46062018077475,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0.0821005894499457,0,0,0.767658796194425,0,0,0,0.369754010166788,0,0,0,0.553995408531877,1.40381113229099,1.30206522429511,0,0,0,0,0.377875943688809,0,0.232429036905685,0,0,0,0,0,0,0.645484683583826,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0.290209238628584,0,1.86846674698672,0,0,0,0.605399502633369,1.47311054395026,0.949387162322653,0,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0.579386075843295,0,0.486634870302636,0,0.443458794925128,0.175669571386252,2.16115474571226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52054421143703,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,1.51956613997496,9.66587019936497,2.29469296599051,0,0.560677600142307,1.06748995729705,0.74000264525148,1.24484414159907,0.134710672069688,0,0.302714855289863,0,0.234321431833797,1.24864030732128,0,1.49448680551801,0,0,0.280901613404497,0.408308342509787,0.122834317311768,1.13658359293342,1.18800285728205,0,0,0,0.168336113954066,0.375355559615893,0.554128230968366,0,0,0,0.113432183160021,0,0.213557388818567,0.635795703478686,0,0.103052529238439,0.257640540045629,0.37223371266318,0.337552664482532,0.194874010322397,0,0.276149695926898,3.39456719319505,1.06502877754984,0.201504196455281,0.339121184620975,0.193260853163297,0.545492241181669,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,1.39310378409594,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0.171567810298526,0.658501712451753,0,0,0,0,0,0,0,1.40890433082986,0.721832238805369,0,0.570762456703795,0,0,0,0,0,0.93733833986777,0.335964256397719,0.141775097242386,0.716468181622786,1.45316969256981,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0.672786506072164,0.43596006883328,0.66004457238855,5.94649892485778,3.57656445851882,0,0,0,0.771622122786426,0,0.532844358032199,0.142977993658148,1.62786481617433,0,0,0,0,0.301439377059586,0,0,0,0,0,0.718874566474748,0,0,0.289562613335158,1.64381058040307,0.358121926479791,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,1.8403723757871,1.00034104211935,0.813795071099207,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0,2.17209036170207,0,0.343143423810856,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0.920771839728375,0,0.384417447767103,0,0.321707842287215,1.48418066444991,0,0.710246901252508,0.574890092096664,0,0.232420756919918,0,0,0.184161977871793,0.114814448164607,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0.082509499920588,0.574265537996172,0,1.6068392984416,0.96670718292122,0.616194468458578,0.460511024178389,0.964856007391714,2.90034661144339,0.580066775656914,0.852266274161009,1.69160867728801,0.495854746082934,0.192190067365106,1.02090169995667,0.2023155617111,0,2.51849877464512,0,2.15623506123262,2.12922412126809,0.869932992075073,3.52116016297448,2.86249773483982,0.744316738719335,0.316379424718726,0.762520775695299,0,0,0.95460974377781,0,0.179872457583315,0,0,1.41527737101321,0,0.421258456238981,0,1.46228093778771,2.11300293513511,0.682499557039929,0,0,1.65409603063837,0.66343897524122,1.75380354101505,0.578775534266688,0,6.29022168584383,1.54911749049875,0.563391205064483,0.286822704408103,0.0982490410131212,6.06340787518125,0,5.06658324714394,5.92730807327823,0.379473173765715,0.699869440489966,0,0,1.08890984861323,0.376575203107117,0.43050537267123,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.86032717087576,0,0,0,0,0,0,0,0,3.33926115068718,0.16480387422676,0,8.36841550654493,2.48655523978033,0,0.20453736500431,0,0.311039587661807,0,0,0,4.63624006493588,0,0,0,0,0,0,0,0.724999575434793,0.227586896570999,1.5255219017566,0,0,0,0,0,0,0,0,0.295547618953547,0.438770794307945,0,1.11538995422883,5.92516990479237,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.652931232636591,0.141353071433941,0,8.95735737970654,3.62676014463691,6.11030144933625,0,0,0,0.134802265961354,45.746925896031,0,0,0.19566461893209,0.485560759068186,4.73501283419269,1.20990716048664,0,2.40109002588254,0.300646838828985,0,0.664653872707185,0.661983911750998,0.941798755221676,0,0.853828638089378,0.554698692052555,0,0.489961987071888,0.609414446062818,7.68797340264933,2.40780445460263,0,0,0,5.91633000579358,0,5.19755703795225,0,0.993573058514948,0.126621591911757,0.586654148204409,0,5.76323085796252,0,0,0,0,0.14405479798815,0,0.471388069233591,0,0,0,0.288950589901519,0,0,0,0,0,25.4146985157751,36.8948282658811,1.43574604915363,14.5765670364264,42.0641527173839,11.1585728720936,42.9302389190181,1.08089965062721,0,0,0,0,0,0.169346664131569,0,0,0.3215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| |||
|short_description=p8@SVIL | |||
}} |
Revision as of 02:23, 11 January 2014
Short description: | p8@SVIL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SVIL_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 32bp_to_uc001iuv.1_5end |
EntrezGene: | SVIL |
HGNC: | 11480 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.30e-11 | 114 |
germ layer | 3.07e-10 | 560 |
germ layer / neural crest | 3.07e-10 | 560 |
embryonic tissue | 3.07e-10 | 560 |
presumptive structure | 3.07e-10 | 560 |
germ layer / neural crest derived structure | 3.07e-10 | 560 |
epiblast (generic) | 3.07e-10 | 560 |
embryonic structure | 5.87e-10 | 564 |
mesoderm | 8.00e-10 | 315 |
mesoderm-derived structure | 8.00e-10 | 315 |
presumptive mesoderm | 8.00e-10 | 315 |
embryo | 3.56e-09 | 592 |
saliva-secreting gland | 4.01e-09 | 6 |
gland of oral region | 4.01e-09 | 6 |
gland of foregut | 4.01e-09 | 6 |
oral gland | 4.01e-09 | 6 |
oral cavity | 4.01e-09 | 6 |
developing anatomical structure | 8.23e-09 | 581 |
splanchnic layer of lateral plate mesoderm | 9.64e-09 | 83 |
reproductive organ | 2.04e-08 | 48 |
primary circulatory organ | 2.39e-08 | 27 |
blood vessel layer | 5.79e-08 | 7 |
epithelial tube open at both ends | 2.41e-07 | 59 |
blood vessel | 2.41e-07 | 59 |
blood vasculature | 2.41e-07 | 59 |
vascular cord | 2.41e-07 | 59 |
artery | 5.52e-07 | 42 |
arterial blood vessel | 5.52e-07 | 42 |
arterial system | 5.52e-07 | 42 |