FFCP PHASE1:Hg19::chr11:111779604..111779626,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C987 | |||
|description=CAGE_peak_at_chr11:111779604..111779626,+ | |||
|id=chr11:111779604..111779626,+ | |||
|ontology_enrichment_celltype=CL:0000136!2.26e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.92e-09;13!CL:0002580;3.49e-09;3!CL:0002615;7.47e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,6.02e-09,3;CL:0002615,1.17e-08,3;CL:0000136,2.80e-08,15;CL:0002617,8.16e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;9.73e-07;4!UBERON:0007284;9.73e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.15e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.14e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.56e-41!115;UBERON:0001049!3.41e-22!57;UBERON:0005068!3.41e-22!57;UBERON:0006241!3.41e-22!57;UBERON:0007135!3.41e-22!57;UBERON:0005743!1.10e-19!86;UBERON:0003075!1.60e-18!86;UBERON:0007284!1.60e-18!86;UBERON:0001017!2.10e-18!82;UBERON:0000073!2.72e-17!94;UBERON:0001016!2.72e-17!94;UBERON:0002616!4.51e-17!59;UBERON:0002346!5.53e-17!90;UBERON:0003080!2.33e-16!42;UBERON:0000955!1.60e-15!69;UBERON:0006238!1.60e-15!69;UBERON:0002780!2.01e-15!41;UBERON:0001890!2.01e-15!41;UBERON:0006240!2.01e-15!41;UBERON:0000153!1.46e-13!129;UBERON:0007811!1.46e-13!129;UBERON:0001893!7.27e-13!34;UBERON:0003056!1.20e-12!61;UBERON:0002020!1.22e-12!34;UBERON:0003528!1.22e-12!34;UBERON:0000033!2.45e-12!123;UBERON:0002791!3.68e-12!33;UBERON:0004121!9.74e-12!169;UBERON:0001869!4.44e-11!32;UBERON:0000924!4.91e-11!173;UBERON:0006601!4.91e-11!173;UBERON:0000475!6.85e-09!365;UBERON:0002308!7.53e-09!9;UBERON:0000125!7.53e-09!9;UBERON:0002298!7.67e-09!8;UBERON:0009663!2.67e-07!7;UBERON:0003076!4.53e-07!15;UBERON:0003057!4.53e-07!15;UBERON:0002420!5.30e-07!9;UBERON:0007245!5.30e-07!9;UBERON:0010009!5.30e-07!9;UBERON:0010011!5.30e-07!9;UBERON:0000454!5.30e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001443;3.60e-12;11!UBERON:0007100;3.24e-10;25!UBERON:0004151;4.90e-10;3!UBERON:0000310;8.91e-10;10!UBERON:0003978;7.47e-09;3!UBERON:0000946;7.47e-09;3!UBERON:0005090;1.20e-07;2!UBERON:0001630;1.20e-07;2!UBERON:0003688;1.64e-07;6!UBERON:0002358;1.64e-07;6!UBERON:0003684;1.64e-07;6!UBERON:0001178;1.64e-07;6!UBERON:0004457;1.95e-07;9!UBERON:0000042;1.95e-07;9!UBERON:0001875;3.98e-07;2!UBERON:0006514;3.98e-07;2!UBERON:0007023;4.33e-07;114!UBERON:0002081;5.37e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.45e-22,114;UBERON:0001443,3.03e-12,11;UBERON:0004151,5.57e-10,3;UBERON:0000310,7.58e-10,10;UBERON:0007100,2.55e-09,27;UBERON:0003978,7.96e-09,3;UBERON:0009751,7.96e-09,3;UBERON:0000946,7.96e-09,3;UBERON:0002523,7.96e-09,3;UBERON:0005983,7.96e-09,3;UBERON:0002165,7.96e-09,3;UBERON:0002062,7.96e-09,3;UBERON:0007280,7.96e-09,3;UBERON:0010314,4.55e-08,132;UBERON:0001049,8.75e-08,56;UBERON:0005068,8.75e-08,56;UBERON:0006241,8.75e-08,56;UBERON:0007135,8.75e-08,56;UBERON:0003075,1.16e-07,82;UBERON:0007284,1.16e-07,82;UBERON:0005090,1.21e-07,2;UBERON:0001630,1.21e-07,2;UBERON:0003103,1.51e-07,68;UBERON:0003688,2.81e-07,6;UBERON:0002358,2.81e-07,6;UBERON:0003684,2.81e-07,6;UBERON:0001178,2.81e-07,6;UBERON:0000073,3.32e-07,53;UBERON:0002616,3.32e-07,53;UBERON:0002346,4.10e-07,86;UBERON:0001875,4.94e-07,2;UBERON:0006514,4.94e-07,2;UBERON:0002081,6.08e-07,2;UBERON:0010227,6.08e-07,2;UBERON:0001017,8.08e-07,81;UBERON:0000955,9.26e-07,68;UBERON:0006238,9.26e-07,68 | |||
|phase1_expression=1.99846217197612,1.71280419112787,1.26858963686374,1.0007329835313,1.78784437770915,1.74467704820074,0,1.89515962028049,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0.869079113764942,0,2.91980922181582,0,0,0,0.196468613246569,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,1.68203280042692,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0,0,0.494533858557114,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0,0.358779271377724,0,0,0.300091096084402,0,0,0,0,0.292311015483596,0.757301322732344,0.276149695926898,0,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,1.85488647960123,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.514137463516618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.958499421966331,1.14861935834114,0,1.15825045334063,0.410952645100767,0.895304816199478,0,0,0,0,0.254094624222463,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0.831883446123229,1.60586089917446,0.788512075169673,1.28855556491985,0.300946099727719,0,0,0.664225598535437,0,0,0,0,0,0,0,0.606255142892519,0,0,1.24053903909388,1.38115775959256,2.24528075546459,1.15325234330131,0,0.160853921143607,1.48418066444991,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.656029291399411,0,0.309123034943167,0,0,0,0,0,0,0.154048617114644,0,0.275673144969061,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,1.05553817648832,0.987884678879706,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,4.27296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0.597743964753209,0,0,0,0,0.311039587661807,0,0,0,0.789147245095469,0,0,4.84666373047609,1.94813006139888,0,0,0,3.62499787717397,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,2.65992857058193,1.31631238292384,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,2.56124305326573,10.4335094148843,2.81117334870407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0,0.698906672968121,2.57979048707425,0,0,0,0.484945082442097,0,5.19755703795225,0,0,0.696418755514666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,2.0535806833799,0,0,0,1.39641200636127,1.60412296808179,1.43574604915363,7.98716001995964,9.44297305900456,5.13294352116307,4.36692571163721,0,0,0,0,0,0,0,0,1.49823746722733,0,0,0,0,0,0.425246896606173,0,4.09789677955831,0.83927341015997,0,0,0,6.4322579373603,20.5248510813284,0.25426853765475,0.542999601753713,1.72844298240254,0.653174720218818,0,0,0,0.113312091520126,0,0,0.258565912723101,1.85125642439766,0,0,0.213574825135389,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0.983617892129413,0,0,0.732157589411779,0.625954653532499,0.573409195690071,1.10929051536852,2.11127770000704,0.138348634936231,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.457680136793847,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0.690860683462397,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0,0,0.578063025868136,0,0.957803154342908,0,0,0.96820153449905,1.61475645631851,0,0,0,0,0,2.288292572803,0,0,0.150420656698515,0,0,0,0,0,0.810451015420736,0.781078098613847,0.413373593002368,1.14148458349032,0,0.548257766857182,2.48105589194647,0,0.127762427639595,0,0.672567444437648,0.606965604236632,0,0.354809480650555,0,0,0.747667062745149,1.51277379194553,0,0,0.627944742804112,0.314231179832004,0,0.913158720509496,0.215927591218621,0,0.643288897589907,0,0,0,0,0,0.17071847709395,0,0,0,0,0,1.60374807980835,0,0,0,0,0,6.47428837187895,4.82515192224361,1.1598144313382,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.980593287015622,0,0.785233868459781,0.891139200981258,1.6906229103336,0.339854229375634,0.0939839179798536,0,0,0,0,0,0,0.917458566809082,3.72682916193773,0,1.56380427439104,0,0,1.11598505450025,0.924351257262837,1.73050624849516,0,0,0,0,0,0,0,0.227336094654718,0,0.829169439458779,1.44806194206653,2.98527574661373,0.714193294391221,0.0645889098360061,0.0620747142958579,0,0.954707374172474,0.808468755832877,2.17716747896961,6.50243272062034,0.404112318087525,0.358611026963382,1.99596213927608,0,0,0,0,7.03922827210363,0,0,1.33151354837103,0.201273793591026,0 | |||
|short_description=p@chr11:111779604..111779626,+ | |||
}} |
Revision as of 10:18, 11 January 2014
Short description: | p@chr11:111779604..111779626, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:111779604..111779626, + |
Coexpression cluster: | C987_skeletal_heart_left_mature_spinal_kidney_substantia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 6.02e-09 | 3 |
adipocyte of omentum tissue | 1.17e-08 | 3 |
fat cell | 2.80e-08 | 15 |
adipocyte of breast | 8.16e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.45e-22 | 114 |
chest | 3.03e-12 | 11 |
cardiac chamber | 5.57e-10 | 3 |
breast | 7.58e-10 | 10 |
primary circulatory organ | 2.55e-09 | 27 |
valve | 7.96e-09 | 3 |
cardiac mesenchyme | 7.96e-09 | 3 |
cardial valve | 7.96e-09 | 3 |
tunica intima | 7.96e-09 | 3 |
heart layer | 7.96e-09 | 3 |
endocardium | 7.96e-09 | 3 |
endocardial cushion | 7.96e-09 | 3 |
presumptive endocardium | 7.96e-09 | 3 |
structure with developmental contribution from neural crest | 4.55e-08 | 132 |
neural tube | 8.75e-08 | 56 |
neural rod | 8.75e-08 | 56 |
future spinal cord | 8.75e-08 | 56 |
neural keel | 8.75e-08 | 56 |
neural plate | 1.16e-07 | 82 |
presumptive neural plate | 1.16e-07 | 82 |
muscle structure | 1.21e-07 | 2 |
muscle organ | 1.21e-07 | 2 |
compound organ | 1.51e-07 | 68 |
omentum | 2.81e-07 | 6 |
peritoneum | 2.81e-07 | 6 |
abdominal cavity | 2.81e-07 | 6 |
visceral peritoneum | 2.81e-07 | 6 |
regional part of nervous system | 3.32e-07 | 53 |
regional part of brain | 3.32e-07 | 53 |
neurectoderm | 4.10e-07 | 86 |
globus pallidus | 4.94e-07 | 2 |
pallidum | 4.94e-07 | 2 |
cardiac atrium | 6.08e-07 | 2 |
future cardiac atrium | 6.08e-07 | 2 |
central nervous system | 8.08e-07 | 81 |
brain | 9.26e-07 | 68 |
future brain | 9.26e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.14e-07 | 2 |