FFCP PHASE1:Hg19::chr11:62380709..62380748,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6094 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10254 | |||
|TSSclassifier=weak | |||
|UniProt=E9PMR7 | |||
|association_with_transcript=-252bp_to_ENST00000525947_5end | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_2_at_ROM1_5end | |||
|id=chr11:62380709..62380748,+ | |||
|ontology_enrichment_celltype=CL:0002139!4.80e-11!24;CL:0000115!2.56e-10!35;CL:0000071!6.31e-10!18;CL:0002546!6.31e-10!18;CL:0002078!3.24e-08!44;CL:1000413!3.39e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000138;3.20e-14;6!CL:0002561;4.18e-12;2!CL:0002602;6.13e-12;2!CL:0000153;1.59e-09;9!CL:0000447;1.59e-09;9!CL:0002564;4.09e-08;3!CL:0000135;8.87e-08;3!CL:0000388;8.87e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,2.79e-14,6;CL:0000138,2.79e-14,6;CL:0002561,4.43e-12,2;CL:0002602,6.15e-12,2;CL:0000153,1.46e-09,9;CL:0000447,1.46e-09,9;CL:0002564,3.55e-08,3;CL:0000135,5.64e-08,3;CL:0000388,5.64e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.42e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!5.71e-19!86;UBERON:0007284!5.71e-19!86;UBERON:0001049!4.28e-18!57;UBERON:0005068!4.28e-18!57;UBERON:0006241!4.28e-18!57;UBERON:0007135!4.28e-18!57;UBERON:0002346!2.78e-17!90;UBERON:0005743!6.24e-17!86;UBERON:0000477!1.19e-15!286;UBERON:0000483!1.96e-15!309;UBERON:0004111!2.45e-15!241;UBERON:0000119!2.47e-15!312;UBERON:0001017!2.95e-15!82;UBERON:0000025!6.38e-15!194;UBERON:0003056!1.17e-14!61;UBERON:0002616!1.29e-14!59;UBERON:0002780!1.85e-14!41;UBERON:0001890!1.85e-14!41;UBERON:0006240!1.85e-14!41;UBERON:0000955!4.35e-14!69;UBERON:0006238!4.35e-14!69;UBERON:0003080!7.29e-14!42;UBERON:0000073!1.11e-13!94;UBERON:0001016!1.11e-13!94;UBERON:0000033!1.94e-13!123;UBERON:0007023!4.36e-13!115;UBERON:0002020!4.25e-12!34;UBERON:0003528!4.25e-12!34;UBERON:0000153!6.40e-12!129;UBERON:0007811!6.40e-12!129;UBERON:0001893!6.57e-12!34;UBERON:0000467!1.01e-11!625;UBERON:0000480!1.30e-11!626;UBERON:0000468!1.80e-11!659;UBERON:0002791!1.81e-11!33;UBERON:0000475!5.90e-11!365;UBERON:0004121!7.77e-11!169;UBERON:0001869!9.39e-11!32;UBERON:0000924!4.18e-10!173;UBERON:0006601!4.18e-10!173;UBERON:0000481!4.56e-10!347;UBERON:0001986!6.31e-10!18;UBERON:0004638!6.31e-10!18;UBERON:0004852!6.31e-10!18;UBERON:0000923!6.71e-09!604;UBERON:0005291!6.71e-09!604;UBERON:0006598!6.71e-09!604;UBERON:0002532!6.71e-09!604;UBERON:0002050!8.41e-09!605;UBERON:0005423!8.41e-09!605;UBERON:0000922!1.26e-08!612;UBERON:0002308!1.05e-07!9;UBERON:0000125!1.05e-07!9;UBERON:0002420!1.62e-07!9;UBERON:0007245!1.62e-07!9;UBERON:0010009!1.62e-07!9;UBERON:0010011!1.62e-07!9;UBERON:0000454!1.62e-07!9;UBERON:0002619!2.14e-07!22;UBERON:0000487!3.26e-07!22;UBERON:0003915!3.39e-07!9;UBERON:0004700!3.39e-07!9;UBERON:0001917!3.39e-07!9;UBERON:0006914!7.34e-07!25;UBERON:0000956!8.01e-07!25;UBERON:0000203!8.01e-07!25;UBERON:0004872!9.34e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.40e-17;5!UBERON:0002216;1.40e-17;5!UBERON:0011134;1.40e-17;5!UBERON:0002209;1.40e-17;5!UBERON:0002213;1.40e-17;5!UBERON:0007844;1.40e-17;5!UBERON:0011138;1.40e-17;5!UBERON:0001130;1.40e-17;5!UBERON:0001066;1.40e-17;5!UBERON:0001468;1.40e-17;5!UBERON:0002784;2.82e-13;4!UBERON:0001905;1.93e-12;2!UBERON:0002757;1.93e-12;2!UBERON:0010134;1.93e-12;2!UBERON:0005408;1.93e-12;2!UBERON:0001899;1.93e-12;2!UBERON:0005933;4.18e-12;2!UBERON:0005942;4.18e-12;2!UBERON:0005932;4.18e-12;2!UBERON:0006444;6.13e-12;2!UBERON:0001995;6.13e-12;2!UBERON:0004715;6.13e-12;2!UBERON:0004905;4.88e-11;8!UBERON:0000982;4.88e-11;8!UBERON:0004770;4.88e-11;8!UBERON:0000966;2.23e-10;5!UBERON:0005388;2.23e-10;5!UBERON:0001802;2.23e-10;5!UBERON:0000970;2.39e-09;20!UBERON:0002104;7.13e-09;21!UBERON:0002418;3.07e-08;3!UBERON:0004755;3.07e-08;3!UBERON:0002242;4.09e-08;3!UBERON:0000020;4.77e-08;23!UBERON:0007846;8.87e-08;3!UBERON:0000043;8.87e-08;3!UBERON:0007845;8.87e-08;3!UBERON:0001894;9.03e-08;7!UBERON:0001032;1.10e-07;24!UBERON:0004456;1.10e-07;24!UBERON:0000019;5.90e-07;19!UBERON:0000047;5.90e-07;19!UBERON:0004088;5.90e-07;19!UBERON:0010230;5.90e-07;19!UBERON:0004765;8.16e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,1.18e-17,5;UBERON:0002216,1.18e-17,5;UBERON:0011134,1.18e-17,5;UBERON:0002209,1.18e-17,5;UBERON:0002213,1.18e-17,5;UBERON:0005856,1.18e-17,5;UBERON:0005866,1.18e-17,5;UBERON:0005863,1.18e-17,5;UBERON:0007844,1.18e-17,5;UBERON:0011138,1.18e-17,5;UBERON:0001130,1.18e-17,5;UBERON:0001066,1.18e-17,5;UBERON:0001468,1.18e-17,5;UBERON:0002784,2.83e-13,4;UBERON:0001905,1.93e-12,2;UBERON:0002757,1.93e-12,2;UBERON:0010134,1.93e-12,2;UBERON:0005408,1.93e-12,2;UBERON:0001899,1.93e-12,2;UBERON:0005933,4.43e-12,2;UBERON:0005942,4.43e-12,2;UBERON:0005932,4.43e-12,2;UBERON:0006444,6.15e-12,2;UBERON:0001995,6.15e-12,2;UBERON:0004715,6.15e-12,2;UBERON:0004905,4.41e-11,8;UBERON:0000982,4.41e-11,8;UBERON:0004770,4.41e-11,8;UBERON:0000970,7.67e-09,21;UBERON:0002104,7.67e-09,21;UBERON:0000966,1.18e-08,6;UBERON:0005388,1.18e-08,6;UBERON:0001802,1.18e-08,6;UBERON:0002418,3.08e-08,3;UBERON:0004755,3.08e-08,3;UBERON:0002242,3.55e-08,3;UBERON:0003068,3.55e-08,3;UBERON:0002328,3.55e-08,3;UBERON:0004880,3.55e-08,3;UBERON:0007846,5.64e-08,3;UBERON:0000043,5.64e-08,3;UBERON:0007845,5.64e-08,3;UBERON:0001894,9.04e-08,7;UBERON:0006222,9.04e-08,7;UBERON:0005085,1.01e-07,31;UBERON:0000020,1.17e-07,24;UBERON:0001032,1.17e-07,24;UBERON:0004456,1.17e-07,24 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,2.10402800032079,2.65117900582333,0,0.602694528023977,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,1.0843174571537,1.50401373190767,3.33146993609895,0.795285947051099,1.94653948121054,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0.993812036833525,2.58070378531837,0.694281003215189,0.56530794192401,1.25849830862972,0.825354125820202,0.626984899610432,0,0.35576626268671,0,0.402829317109147,0,0.24406205754817,1.47065232138347,0,0.714397826272638,1.12264686313085,0.225222960966644,0,0.949265659568129,0.732806975721629,0,0,0,0,0.12663051166458,0,0.286836620748814,0.354668382198357,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0,0,0,0.312160076830321,0.570471821544449,0.448346041655403,0.117434498643765,0,0,2.65400422631361,0.368502951935304,2.58314452939414,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0.30648779579902,0.300476117813194,0.113432183160021,0,0,0,0.300091096084402,0.618315175430633,0.257640540045629,0.558350568994769,0,0.584622030967192,0.252433774244115,0.276149695926898,0.484938170456436,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,2.3218396401599,3.60939740834793,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,1.4763109092493,0,0.4115740113314,0,0,0.982827216677626,0,0,0,0,0,0,0.100528972411631,0,0,2.07986957055916,0,2.89826012437692,0,0.577465791044295,0.925971025153221,0.570762456703795,0,0,0,0,0,0,0,0,0.447792613514241,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0.514414748524284,0,0.799266537048298,0,0.542621605391443,0.823240336780769,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0.434343920002738,4.72595541865882,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0.335032530668698,0,0,0,0,1.59498939234882,3.00102312635806,0,0,0.178428988797162,0.157702415033935,0,0.300946099727719,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,1.13733384070897,0,0.215915916102139,0,0.541892875087706,0.501689773854853,0,0,0.223874754722178,0,0,2.05160100093111,0.984043937099117,0,0,0,0,0,0,0,0.096670718292122,0.308097234229289,0,0,0.214840489736547,0.725083469571143,0.0852266274161009,0,0,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0.9266210955196,0.143124886741991,0,0,0,0,0.855877976067841,0.636406495851874,0,0.359744915166629,0,0.235624804691373,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.844430541190656,0,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,1.11321717794222,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0.885741385813839,0.844175070377856,0,0,0.295547618953547,1.53569778007781,0,0,0.153900517007594,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0.104421949505455,0.808813595768125,0,0.702793337176017,0,0,0.242780379534093,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0.416024019039416,0,0.0979923974143777,0,0,0,0.19351266257817,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,319.988728945234,0,0,0.189932387867636,0,0,0,0,0,0.114536596165916,0,0,0.124252535565433,0,0.543616824294456,0.732219924186332,0,0,0.600420288709789,1.23214841002794,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0.160753148465019,0,0,0,0,0.425246896606173,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0.25426853765475,0,0.864221491201268,0.653174720218818,0,0.082092520749339,0.170388021785422,0.453248366080503,0.293104467356165,0,0.904980694530854,0.52893040697076,0,0,0.106787412567695,0,0,0,0,0,0,0,0.5013797880454,0,0,0,0.886068179966986,0.244052529803926,0.751145584238999,0,0.998361463831671,0.558867626472451,0,0,0,0,0,0,0,0,0,0,1.89403005275089,1.0062716070103,0.889811221596536,0,0.302461847526478,0.310874401165561,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0.464033759878494,0,0.800055529326307,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0.675769762612291,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.128458450192919,0,0.638535436228605,0.615349092722265,0,0.760729777106397,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0.781514011233092,0,0,0,0.270150338473579,0,0.413373593002368,0.19024743058172,0,0,0,0,0,56.2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| |||
|short_description=p2@ROM1 | |||
}} |
Revision as of 08:10, 11 January 2014
Short description: | p2@ROM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ROM1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -252bp_to_ENST00000525947_5end |
EntrezGene: | ROM1 |
HGNC: | 10254 |
UniProt: | E9PMR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 2.79e-14 | 6 |
chondrocyte | 2.79e-14 | 6 |
outer root sheath cell | 4.43e-12 | 2 |
annulus pulposus cell | 6.15e-12 | 2 |
GAG secreting cell | 1.46e-09 | 9 |
carbohydrate secreting cell | 1.46e-09 | 9 |
nucleus pulposus cell of intervertebral disc | 3.55e-08 | 3 |
fibrocyte | 5.64e-08 | 3 |
tendon cell | 5.64e-08 | 3 |